RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 CHAF1AQ13111 956 aaPredicted RBP16.33■□□□□ 0.2
CLPX-201ENST00000300107 POGKQ9P215 609 aa16.33■□□□□ 0.2
CLPX-201ENST00000300107 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
CLPX-201ENST00000300107 EIF4G1Q04637 1599 aaKnown RBP16.32■□□□□ 0.2
CLPX-201ENST00000300107 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
CLPX-201ENST00000300107 GBP4Q96PP9 640 aa16.32■□□□□ 0.2
CLPX-201ENST00000300107 HAP1P54257 671 aaPredicted RBP16.32■□□□□ 0.2
CLPX-201ENST00000300107 GZF1Q9H116 711 aaPredicted RBP16.32■□□□□ 0.2
CLPX-201ENST00000300107 ARHGAP35Q9NRY4 1499 aa16.32■□□□□ 0.2
CLPX-201ENST00000300107 USP35Q9P2H5 1018 aa16.31■□□□□ 0.2
CLPX-201ENST00000300107 MROH2BQ7Z745 1585 aa16.3■□□□□ 0.2
CLPX-201ENST00000300107 NRDCO43847 1150 aa16.3■□□□□ 0.2
CLPX-201ENST00000300107 FOXD1Q16676 465 aa16.3■□□□□ 0.2
CLPX-201ENST00000300107 CFAP44Q96MT7 982 aa16.3■□□□□ 0.2
CLPX-201ENST00000300107 PKD2Q13563 968 aa16.29■□□□□ 0.2
CLPX-201ENST00000300107 MPHOSPH9Q99550 1183 aa16.29■□□□□ 0.2
CLPX-201ENST00000300107 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
CLPX-201ENST00000300107 GOLGA6L6A8MZA4 724 aa16.28■□□□□ 0.2
CLPX-201ENST00000300107 PTMSP20962 102 aa16.28■□□□□ 0.2
CLPX-201ENST00000300107 GOLGA6L4A6NEF3 574 aa16.28■□□□□ 0.2
CLPX-201ENST00000300107 RWDD1Q9H446 243 aaPredicted RBP16.28■□□□□ 0.2
CLPX-201ENST00000300107 PDE3BQ13370 1112 aa16.28■□□□□ 0.2
CLPX-201ENST00000300107 MORC1Q86VD1 984 aa16.28■□□□□ 0.2
CLPX-201ENST00000300107 FANCIQ9NVI1 1328 aa16.27■□□□□ 0.19
CLPX-201ENST00000300107 GOLGA6L3A6NEY3 463 aa16.27■□□□□ 0.19
CLPX-201ENST00000300107 GGT6Q6P531 493 aa16.26■□□□□ 0.19
CLPX-201ENST00000300107 KCNJ4P48050 445 aa16.26■□□□□ 0.19
CLPX-201ENST00000300107 L3MBTL2Q969R5 705 aa16.25■□□□□ 0.19
CLPX-201ENST00000300107 IPO8O15397 1037 aaKnown RBP16.25■□□□□ 0.19
CLPX-201ENST00000300107 MCCP23508 829 aa16.25■□□□□ 0.19
CLPX-201ENST00000300107 FGD1P98174 961 aa16.25■□□□□ 0.19
CLPX-201ENST00000300107 DHX57Q6P158 1386 aaKnown RBP16.25■□□□□ 0.19
CLPX-201ENST00000300107 SAFB2Q14151 953 aaKnown RBP eCLIP16.24■□□□□ 0.19
CLPX-201ENST00000300107 NLRP13Q86W25 1043 aa16.24■□□□□ 0.19
CLPX-201ENST00000300107 ABCC8Q09428 1581 aa16.23■□□□□ 0.19
CLPX-201ENST00000300107 OS9Q13438 667 aaPredicted RBP16.22■□□□□ 0.19
CLPX-201ENST00000300107 PMFBP1Q8TBY8 1022 aa16.21■□□□□ 0.19
CLPX-201ENST00000300107 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
CLPX-201ENST00000300107 SOX12O15370 315 aa16.21■□□□□ 0.19
CLPX-201ENST00000300107 KIAA2012Q0VF49 1180 aa16.21■□□□□ 0.19
CLPX-201ENST00000300107 FMN1Q68DA7 1419 aa16.21■□□□□ 0.18
CLPX-201ENST00000300107 PDE4AP27815 886 aa16.2■□□□□ 0.18
CLPX-201ENST00000300107 DRC7Q8IY82 874 aa16.18■□□□□ 0.18
CLPX-201ENST00000300107 ROCK2O75116 1388 aaKnown RBP16.17■□□□□ 0.18
CLPX-201ENST00000300107 MFAP1P55081 439 aaKnown RBP16.17■□□□□ 0.18
CLPX-201ENST00000300107 GSE1Q14687 1217 aa16.17■□□□□ 0.18
CLPX-201ENST00000300107 PRKRIP1Q9H875 184 aaPredicted RBP16.16■□□□□ 0.18
CLPX-201ENST00000300107 ITPRIPQ8IWB1 547 aa16.16■□□□□ 0.18
CLPX-201ENST00000300107 ZBED9Q6R2W3 1325 aa16.16■□□□□ 0.18
CLPX-201ENST00000300107 U2AF1L5P0DN76 240 aaPredicted RBP16.16■□□□□ 0.18
CLPX-201ENST00000300107 U2AF1Q01081 240 aaKnown RBP eCLIP16.16■□□□□ 0.18
CLPX-201ENST00000300107 PDS5BQ9NTI5 1447 aa16.15■□□□□ 0.18
CLPX-201ENST00000300107 RSPH6AQ9H0K4 717 aa16.15■□□□□ 0.18
CLPX-201ENST00000300107 STK26Q9P289 416 aa16.14■□□□□ 0.17
CLPX-201ENST00000300107 SRPK2P78362 688 aaKnown RBP16.14■□□□□ 0.17
CLPX-201ENST00000300107 NAP1L2Q9ULW6 460 aaPredicted RBP16.13■□□□□ 0.17
CLPX-201ENST00000300107 NUP155O75694 1391 aa16.13■□□□□ 0.17
CLPX-201ENST00000300107 CALD1Q05682 793 aaKnown RBP16.13■□□□□ 0.17
CLPX-201ENST00000300107 SYAP1Q96A49 352 aaPredicted RBP16.13■□□□□ 0.17
CLPX-201ENST00000300107 APBB1O00213 710 aa16.13■□□□□ 0.17
CLPX-201ENST00000300107 FAM161AQ3B820 660 aa16.12■□□□□ 0.17
CLPX-201ENST00000300107 CENPQQ7L2Z9 268 aaPredicted RBP16.12■□□□□ 0.17
CLPX-201ENST00000300107 ARID3AQ99856 593 aa16.12■□□□□ 0.17
CLPX-201ENST00000300107 TAOK2Q9UL54 1235 aa16.12■□□□□ 0.17
CLPX-201ENST00000300107 KANK1Q14678 1352 aa16.11■□□□□ 0.17
CLPX-201ENST00000300107 CLUAP1Q96AJ1 413 aa16.11■□□□□ 0.17
CLPX-201ENST00000300107 HSP90AA2PQ14568 343 aaPredicted RBP16.11■□□□□ 0.17
CLPX-201ENST00000300107 EXOC6Q8TAG9 804 aa16.1■□□□□ 0.17
CLPX-201ENST00000300107 CENPJQ9HC77 1338 aaPredicted RBP16.1■□□□□ 0.17
CLPX-201ENST00000300107 SLC4A3P48751 1232 aa16.1■□□□□ 0.17
CLPX-201ENST00000300107 PHLDB1Q86UU1 1377 aa16.1■□□□□ 0.17
CLPX-201ENST00000300107 KIAA1211Q6ZU35 1233 aa16.1■□□□□ 0.17
CLPX-201ENST00000300107 CARMIL2Q6F5E8 1435 aa16.09■□□□□ 0.17
CLPX-201ENST00000300107 RRP1P56182 461 aaKnown RBP16.09■□□□□ 0.17
CLPX-201ENST00000300107 SMC4Q9NTJ3 1288 aa16.09■□□□□ 0.17
CLPX-201ENST00000300107 MYBBP1AQ9BQG0 1328 aaKnown RBP16.09■□□□□ 0.17
CLPX-201ENST00000300107 EFCAB2Q5VUJ9 269 aa16.09■□□□□ 0.17
CLPX-201ENST00000300107 KIF15Q9NS87 1388 aa16.08■□□□□ 0.16
CLPX-201ENST00000300107 ANKRD30AQ9BXX3 1397 aa16.06■□□□□ 0.16
CLPX-201ENST00000300107 DDX11L8A8MPP1 907 aa16.06■□□□□ 0.16
CLPX-201ENST00000300107 SMARCA2P51531 1590 aa16.06■□□□□ 0.16
CLPX-201ENST00000300107 CADPSQ9ULU8 1353 aa16.05■□□□□ 0.16
CLPX-201ENST00000300107 CCDC146Q8IYE0 955 aa16.05■□□□□ 0.16
CLPX-201ENST00000300107 PLIN1O60240 522 aa16.05■□□□□ 0.16
CLPX-201ENST00000300107 HNRNPMP52272 730 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLPX-201ENST00000300107 KIF3BO15066 747 aa16.04■□□□□ 0.16
CLPX-201ENST00000300107 RTF1Q92541 710 aaKnown RBP16.04■□□□□ 0.16
CLPX-201ENST00000300107 ST20-MTHFSA0A0A6YYL1 179 aa16.03■□□□□ 0.16
CLPX-201ENST00000300107 HDGFL2Q7Z4V5 671 aaPredicted RBP16.03■□□□□ 0.16
CLPX-201ENST00000300107 HDGFP51858 240 aaKnown RBP16.03■□□□□ 0.16
CLPX-201ENST00000300107 FOXD4L1Q9NU39 408 aa16.03■□□□□ 0.16
CLPX-201ENST00000300107 AMER1Q5JTC6 1135 aaPredicted RBP16.02■□□□□ 0.16
CLPX-201ENST00000300107 JPH4Q96JJ6 628 aa16.02■□□□□ 0.16
CLPX-201ENST00000300107 CRBNQ96SW2 442 aa16.02■□□□□ 0.16
CLPX-201ENST00000300107 RAPGEF2Q9Y4G8 1499 aa16.02■□□□□ 0.15
CLPX-201ENST00000300107 FHOD3Q2V2M9 1422 aa16.01■□□□□ 0.15
CLPX-201ENST00000300107 HTATSF1O43719 755 aaKnown RBP16.01■□□□□ 0.15
CLPX-201ENST00000300107 VSIG10Q8N0Z9 540 aa15.99■□□□□ 0.15
CLPX-201ENST00000300107 CGNL1Q0VF96 1302 aa15.99■□□□□ 0.15
CLPX-201ENST00000300107 NUTM2DQ5VT03 806 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms