RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 GPATCH8Q9UKJ3 1502 aaKnown RBP36.99■■■■□ 3.51
GBX1-201ENST00000297537 PREX2Q70Z35 1606 aa36.99■■■■□ 3.51
GBX1-201ENST00000297537 ADGRL1O94910 1474 aa36.98■■■■□ 3.51
GBX1-201ENST00000297537 FRMPD1Q5SYB0 1578 aa36.98■■■■□ 3.51
GBX1-201ENST00000297537 SCAPERQ9BY12 1400 aa36.96■■■■□ 3.51
GBX1-201ENST00000297537 CDC42BPAQ5VT25 1732 aa36.96■■■■□ 3.51
GBX1-201ENST00000297537 LRRC9Q6ZRR7 1453 aa36.93■■■■□ 3.5
GBX1-201ENST00000297537 RICTORQ6R327 1708 aa36.92■■■■□ 3.5
GBX1-201ENST00000297537 CCNB3Q8WWL7 1395 aa36.91■■■■□ 3.5
GBX1-201ENST00000297537 KANK4Q5T7N3 995 aaPredicted RBP36.9■■■■□ 3.5
GBX1-201ENST00000297537 POGZQ7Z3K3 1410 aa36.87■■■■□ 3.49
GBX1-201ENST00000297537 NCOA2Q15596 1464 aa36.84■■■■□ 3.49
GBX1-201ENST00000297537 CFDP1Q9UEE9 299 aaPredicted RBP36.84■■■■□ 3.49
GBX1-201ENST00000297537 SUPT6HQ7KZ85 1726 aaKnown RBP36.82■■■■□ 3.49
GBX1-201ENST00000297537 ZMYM4Q5VZL5 1548 aa36.82■■■■□ 3.48
GBX1-201ENST00000297537 ARHGEF12Q9NZN5 1544 aa36.8■■■■□ 3.48
GBX1-201ENST00000297537 APLP2Q06481 763 aa36.8■■■■□ 3.48
GBX1-201ENST00000297537 ABCC1P33527 1531 aa36.8■■■■□ 3.48
GBX1-201ENST00000297537 AFAP1Q8N556 730 aa36.77■■■■□ 3.48
GBX1-201ENST00000297537 ZNF777Q9ULD5 760 aaPredicted RBP36.77■■■■□ 3.48
GBX1-201ENST00000297537 ZNF518AQ6AHZ1 1483 aa36.76■■■■□ 3.48
GBX1-201ENST00000297537 MAGI2Q86UL8 1455 aa36.76■■■■□ 3.48
GBX1-201ENST00000297537 SAMD9LQ8IVG5 1584 aa36.76■■■■□ 3.48
GBX1-201ENST00000297537 KDM4FA0A1W2PPD8 638 aa36.73■■■■□ 3.47
GBX1-201ENST00000297537 TRAPPC8Q9Y2L5 1435 aa36.73■■■■□ 3.47
GBX1-201ENST00000297537 KDM5CP41229 1560 aa36.72■■■■□ 3.47
GBX1-201ENST00000297537 KIAA1107Q9UPP5 1409 aa36.72■■■■□ 3.47
GBX1-201ENST00000297537 ITSN2Q9NZM3 1697 aa36.71■■■■□ 3.47
GBX1-201ENST00000297537 YEATS2Q9ULM3 1422 aa36.69■■■■□ 3.46
GBX1-201ENST00000297537 ARHGEF40Q8TER5 1519 aa36.69■■■■□ 3.46
GBX1-201ENST00000297537 PLEKHH2Q8IVE3 1493 aa36.68■■■■□ 3.46
GBX1-201ENST00000297537 ZNF644Q9H582 1327 aaPredicted RBP36.67■■■■□ 3.46
GBX1-201ENST00000297537 ZFYVE16Q7Z3T8 1539 aa36.66■■■■□ 3.46
GBX1-201ENST00000297537 HNRNPMP52272 730 aaKnown RBP eCLIP36.66■■■■□ 3.46
GBX1-201ENST00000297537 SYCP2Q9BX26 1530 aa36.64■■■■□ 3.46
GBX1-201ENST00000297537 MLH3Q9UHC1 1453 aa36.62■■■■□ 3.45
GBX1-201ENST00000297537 MBD5Q9P267 1494 aa36.58■■■■□ 3.45
GBX1-201ENST00000297537 HECW2Q9P2P5 1572 aa36.57■■■■□ 3.44
GBX1-201ENST00000297537 MYOM3Q5VTT5 1437 aa36.56■■■■□ 3.44
GBX1-201ENST00000297537 ATP10AO60312 1499 aa36.56■■■■□ 3.44
GBX1-201ENST00000297537 MIA2Q96PC5 1412 aa36.53■■■■□ 3.44
GBX1-201ENST00000297537 CAMSAP2Q08AD1 1489 aa36.52■■■■□ 3.44
GBX1-201ENST00000297537 AEBP2Q6ZN18 517 aaPredicted RBP36.51■■■■□ 3.44
GBX1-201ENST00000297537 MYT1LQ9UL68 1186 aa36.48■■■■□ 3.43
GBX1-201ENST00000297537 SPAG9O60271 1321 aaKnown RBP36.48■■■■□ 3.43
GBX1-201ENST00000297537 C9orf84Q5VXU9 1444 aa36.48■■■■□ 3.43
GBX1-201ENST00000297537 KIDINS220Q9ULH0 1771 aa36.48■■■■□ 3.43
GBX1-201ENST00000297537 RSPH4AQ5TD94 716 aa36.47■■■■□ 3.43
GBX1-201ENST00000297537 ARID4BQ4LE39 1312 aaPredicted RBP36.47■■■■□ 3.43
GBX1-201ENST00000297537 DIP2CQ9Y2E4 1556 aa36.47■■■■□ 3.43
GBX1-201ENST00000297537 SIGLEC1Q9BZZ2 1709 aa36.47■■■■□ 3.43
GBX1-201ENST00000297537 ABCA6Q8N139 1617 aa36.44■■■■□ 3.42
GBX1-201ENST00000297537 REREQ9P2R6 1566 aa36.4■■■■□ 3.42
GBX1-201ENST00000297537 BCORL1Q5H9F3 1711 aa36.4■■■■□ 3.42
GBX1-201ENST00000297537 CCDC141Q6ZP82 1450 aa36.39■■■■□ 3.42
GBX1-201ENST00000297537 INO80Q9ULG1 1556 aaPredicted RBP36.39■■■■□ 3.42
GBX1-201ENST00000297537 ATP7AQ04656 1500 aa36.39■■■■□ 3.42
GBX1-201ENST00000297537 ADAMTSL3P82987 1691 aa36.39■■■■□ 3.42
GBX1-201ENST00000297537 ARHGEF5Q12774 1597 aa36.38■■■■□ 3.41
GBX1-201ENST00000297537 RTEL1-TNFRSF6BF6WH68 1400 aa36.37■■■■□ 3.41
GBX1-201ENST00000297537 FGD6Q6ZV73 1430 aa36.34■■■■□ 3.41
GBX1-201ENST00000297537 AGLP35573 1532 aa36.3■■■■□ 3.4
GBX1-201ENST00000297537 PTPN23Q9H3S7 1636 aa36.29■■■■□ 3.4
GBX1-201ENST00000297537 TCOF1Q13428 1488 aaKnown RBP36.29■■■■□ 3.4
GBX1-201ENST00000297537 TSPY4P0CV99 314 aa36.27■■■■□ 3.4
GBX1-201ENST00000297537 TSPY10P0CW01 314 aa36.27■■■■□ 3.4
GBX1-201ENST00000297537 MLECQ14165 292 aa36.25■■■■□ 3.39
GBX1-201ENST00000297537 A2MP01023 1474 aa36.23■■■■□ 3.39
GBX1-201ENST00000297537 MADDQ8WXG6 1647 aa36.23■■■■□ 3.39
GBX1-201ENST00000297537 PPARGC1BQ86YN6 1023 aaKnown RBP36.21■■■■□ 3.39
GBX1-201ENST00000297537 PLXNC1O60486 1568 aa36.2■■■■□ 3.39
GBX1-201ENST00000297537 PTPRMP28827 1452 aa36.19■■■■□ 3.38
GBX1-201ENST00000297537 MAST1Q9Y2H9 1570 aa36.19■■■■□ 3.38
GBX1-201ENST00000297537 ABCC5O15440 1437 aa36.17■■■■□ 3.38
GBX1-201ENST00000297537 ADGBQ8N7X0 1667 aa36.16■■■■□ 3.38
GBX1-201ENST00000297537 DHX29Q7Z478 1369 aaKnown RBP36.16■■■■□ 3.38
GBX1-201ENST00000297537 DAPK1P53355 1430 aa36.12■■■■□ 3.37
GBX1-201ENST00000297537 DNMT1P26358 1616 aaKnown RBP36.1■■■■□ 3.37
GBX1-201ENST00000297537 SHANK2Q9UPX8 1470 aa36.1■■■■□ 3.37
GBX1-201ENST00000297537 RIMS1Q86UR5 1692 aaKnown RBP36.09■■■■□ 3.37
GBX1-201ENST00000297537 FER1L4A9Z1Z3 1794 aa36.07■■■■□ 3.37
GBX1-201ENST00000297537 FAM50AQ14320 339 aaKnown RBP36.06■■■■□ 3.36
GBX1-201ENST00000297537 CROCC2H7BZ55 1655 aa36.04■■■■□ 3.36
GBX1-201ENST00000297537 KIF3BO15066 747 aa35.97■■■■□ 3.35
GBX1-201ENST00000297537 GGT6Q6P531 493 aa35.97■■■■□ 3.35
GBX1-201ENST00000297537 PPP6R1Q9UPN7 881 aa35.97■■■■□ 3.35
GBX1-201ENST00000297537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.97■■■■□ 3.35
GBX1-201ENST00000297537 CHIC2Q9UKJ5 165 aa35.94■■■■□ 3.34
GBX1-201ENST00000297537 CNTLNQ9NXG0 1405 aa35.93■■■■□ 3.34
GBX1-201ENST00000297537 ESF1Q9H501 851 aaKnown RBP35.93■■■■□ 3.34
GBX1-201ENST00000297537 KIF15Q9NS87 1388 aa35.92■■■■□ 3.34
GBX1-201ENST00000297537 RRP7BPQ9NSQ0 103 aa35.92■■■■□ 3.34
GBX1-201ENST00000297537 DUOX2Q9NRD8 1548 aa35.92■■■■□ 3.34
GBX1-201ENST00000297537 NCOA1Q15788 1441 aa35.91■■■■□ 3.34
GBX1-201ENST00000297537 CEBPAP49715 358 aaPredicted RBP35.91■■■■□ 3.34
GBX1-201ENST00000297537 ANKRD30AQ9BXX3 1397 aa35.9■■■■□ 3.34
GBX1-201ENST00000297537 PTPRKQ15262 1439 aa35.9■■■■□ 3.34
GBX1-201ENST00000297537 RRBP1Q9P2E9 1410 aaKnown RBP35.9■■■■□ 3.34
GBX1-201ENST00000297537 ADGRL2O95490 1459 aa35.89■■■■□ 3.34
GBX1-201ENST00000297537 PLPPR3Q6T4P5 718 aa35.86■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms