RNA–Protein interactions for RNA: ENST00000289893.8

MACF1-201, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5 BASIC

Gene MACF1, Length 19,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-201ENST00000289893 KNSTRNQ9Y448 316 aa4.51□□□□□ -1.69
MACF1-201ENST00000289893 RRP7BPQ9NSQ0 103 aa4.51□□□□□ -1.69
MACF1-201ENST00000289893 NPHP1O15259 732 aa4.51□□□□□ -1.69
MACF1-201ENST00000289893 B4GALNT3Q6L9W6 998 aa4.51□□□□□ -1.69
MACF1-201ENST00000289893 PLEKHD1A6NEE1 506 aa4.51□□□□□ -1.69
MACF1-201ENST00000289893 PPP4R2Q9NY27 417 aa4.51□□□□□ -1.69
MACF1-201ENST00000289893 FHAD1B1AJZ9 1412 aa4.5□□□□□ -1.69
MACF1-201ENST00000289893 KIAA2012Q0VF49 1180 aa4.5□□□□□ -1.69
MACF1-201ENST00000289893 CHMP7Q8WUX9 453 aaPredicted RBP4.5□□□□□ -1.69
MACF1-201ENST00000289893 LMOD2Q6P5Q4 547 aa4.5□□□□□ -1.69
MACF1-201ENST00000289893 GZF1Q9H116 711 aaPredicted RBP4.5□□□□□ -1.69
MACF1-201ENST00000289893 SMARCA2P51531 1590 aa4.5□□□□□ -1.69
MACF1-201ENST00000289893 GOLGA2Q08379 1002 aa4.5□□□□□ -1.69
MACF1-201ENST00000289893 RGL3Q3MIN7 710 aa4.5□□□□□ -1.69
MACF1-201ENST00000289893 TSPY4P0CV99 314 aa4.5□□□□□ -1.69
MACF1-201ENST00000289893 TSPY10P0CW01 314 aa4.5□□□□□ -1.69
MACF1-201ENST00000289893 SETQ01105 290 aaPredicted RBP4.49□□□□□ -1.69
MACF1-201ENST00000289893 SETD1BQ9UPS6 1966 aaKnown RBP4.49□□□□□ -1.69
MACF1-201ENST00000289893 WIZO95785 1651 aa4.49□□□□□ -1.69
MACF1-201ENST00000289893 U2SURPO15042 1029 aaKnown RBP4.49□□□□□ -1.69
MACF1-201ENST00000289893 GOLGA6L3A6NEY3 463 aa4.49□□□□□ -1.69
MACF1-201ENST00000289893 CCDC88BA6NC98 1476 aa4.49□□□□□ -1.69
MACF1-201ENST00000289893 APBB1O00213 710 aa4.49□□□□□ -1.69
MACF1-201ENST00000289893 PRM3Q9NNZ6 103 aa4.48□□□□□ -1.69
MACF1-201ENST00000289893 IGF1RP08069 1367 aa4.48□□□□□ -1.69
MACF1-201ENST00000289893 SLKQ9H2G2 1235 aaPredicted RBP4.48□□□□□ -1.69
MACF1-201ENST00000289893 HMGB1P09429 215 aaKnown RBP4.48□□□□□ -1.69
MACF1-201ENST00000289893 GOLGA6L1Q8N7Z2 621 aa4.48□□□□□ -1.69
MACF1-201ENST00000289893 USP35Q9P2H5 1018 aa4.48□□□□□ -1.69
MACF1-201ENST00000289893 RBM19Q9Y4C8 960 aaKnown RBP4.48□□□□□ -1.69
MACF1-201ENST00000289893 CC2D1BQ5T0F9 858 aaKnown RBP4.47□□□□□ -1.69
MACF1-201ENST00000289893 POGKQ9P215 609 aa4.47□□□□□ -1.69
MACF1-201ENST00000289893 MROH2BQ7Z745 1585 aa4.47□□□□□ -1.69
MACF1-201ENST00000289893 MCCP23508 829 aa4.47□□□□□ -1.69
MACF1-201ENST00000289893 ANO8Q9HCE9 1232 aaPredicted RBP4.47□□□□□ -1.69
MACF1-201ENST00000289893 FBXO3Q9UK99 471 aa4.47□□□□□ -1.69
MACF1-201ENST00000289893 MS4A1P11836 297 aa4.47□□□□□ -1.69
MACF1-201ENST00000289893 GBP4Q96PP9 640 aa4.47□□□□□ -1.69
MACF1-201ENST00000289893 PATL2C9JE40 543 aaKnown RBP4.47□□□□□ -1.69
MACF1-201ENST00000289893 SOX12O15370 315 aa4.46□□□□□ -1.7
MACF1-201ENST00000289893 CARD11Q9BXL7 1154 aa4.46□□□□□ -1.7
MACF1-201ENST00000289893 ARHGAP35Q9NRY4 1499 aa4.46□□□□□ -1.7
MACF1-201ENST00000289893 HSP90B1P14625 803 aaKnown RBP4.46□□□□□ -1.7
MACF1-201ENST00000289893 MAP7D2Q96T17 732 aa4.46□□□□□ -1.7
MACF1-201ENST00000289893 MTERF4Q7Z6M4 381 aaKnown RBP4.46□□□□□ -1.7
MACF1-201ENST00000289893 UBE2Q2Q8WVN8 375 aa4.46□□□□□ -1.7
MACF1-201ENST00000289893 CHMP4BQ9H444 224 aaKnown RBP4.45□□□□□ -1.7
MACF1-201ENST00000289893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.45□□□□□ -1.71e-6■□□□□ 11
MACF1-201ENST00000289893 SYAP1Q96A49 352 aaPredicted RBP4.45□□□□□ -1.7
MACF1-201ENST00000289893 NOL8Q76FK4 1167 aaKnown RBP4.45□□□□□ -1.7
MACF1-201ENST00000289893 TAF3Q5VWG9 929 aa4.45□□□□□ -1.7
MACF1-201ENST00000289893 KCNH8Q96L42 1107 aa4.45□□□□□ -1.7
MACF1-201ENST00000289893 CDCA8Q53HL2 280 aa4.44□□□□□ -1.7
MACF1-201ENST00000289893 NUDCQ9Y266 331 aa4.44□□□□□ -1.7
MACF1-201ENST00000289893 GON4LQ3T8J9 2241 aa4.44□□□□□ -1.7
MACF1-201ENST00000289893 STK11IPQ8N1F8 1099 aa4.44□□□□□ -1.7
MACF1-201ENST00000289893 ERCC6Q03468 1493 aa4.44□□□□□ -1.7
MACF1-201ENST00000289893 KIAA1211Q6ZU35 1233 aa4.44□□□□□ -1.7
MACF1-201ENST00000289893 FOXD4L1Q9NU39 408 aa4.44□□□□□ -1.7
MACF1-201ENST00000289893 RASSF8Q8NHQ8 419 aa4.44□□□□□ -1.7
MACF1-201ENST00000289893 ZNF771Q7L3S4 317 aaPredicted RBP4.44□□□□□ -1.7
MACF1-201ENST00000289893 KTN1Q86UP2 1357 aaKnown RBP4.44□□□□□ -1.7
MACF1-201ENST00000289893 NOM1Q5C9Z4 860 aaKnown RBP4.43□□□□□ -1.7
MACF1-201ENST00000289893 HOMEZQ8IX15 550 aa4.43□□□□□ -1.7
MACF1-201ENST00000289893 JPH4Q96JJ6 628 aa4.43□□□□□ -1.7
MACF1-201ENST00000289893 TOP2AP11388 1531 aaKnown RBP4.43□□□□□ -1.7
MACF1-201ENST00000289893 HTATSF1O43719 755 aaKnown RBP4.43□□□□□ -1.7
MACF1-201ENST00000289893 SOGA1O94964 1423 aa4.43□□□□□ -1.7
MACF1-201ENST00000289893 TPM4P67936 248 aa4.43□□□□□ -1.7
MACF1-201ENST00000289893 CFTRP13569 1480 aa4.43□□□□□ -1.7
MACF1-201ENST00000289893 FOXD4L5Q5VV16 416 aaPredicted RBP4.43□□□□□ -1.7
MACF1-201ENST00000289893 FOXD4L4Q8WXT5 416 aaPredicted RBP4.43□□□□□ -1.7
MACF1-201ENST00000289893 TPM3P06753 285 aa4.43□□□□□ -1.7
MACF1-201ENST00000289893 FMN1Q68DA7 1419 aa4.43□□□□□ -1.7
MACF1-201ENST00000289893 ZNF330Q9Y3S2 320 aaPredicted RBP4.42□□□□□ -1.7
MACF1-201ENST00000289893 CEP89Q96ST8 783 aa4.42□□□□□ -1.7
MACF1-201ENST00000289893 VPS8Q8N3P4 1428 aa4.42□□□□□ -1.7
MACF1-201ENST00000289893 KANK1Q14678 1352 aa4.42□□□□□ -1.7
MACF1-201ENST00000289893 CREBRFQ8IUR6 639 aa4.42□□□□□ -1.7
MACF1-201ENST00000289893 CCNB3Q8WWL7 1395 aa4.42□□□□□ -1.7
MACF1-201ENST00000289893 RRP9O43818 475 aaKnown RBP4.42□□□□□ -1.7
MACF1-201ENST00000289893 TAF7LQ5H9L4 462 aa4.42□□□□□ -1.7
MACF1-201ENST00000289893 MFAP1P55081 439 aaKnown RBP4.42□□□□□ -1.7
MACF1-201ENST00000289893 CCAR2Q8N163 923 aaKnown RBP4.42□□□□□ -1.7
MACF1-201ENST00000289893 SAFB2Q14151 953 aaKnown RBP eCLIP4.42□□□□□ -1.76e-7■■□□□ 14.3
MACF1-201ENST00000289893 ITPRIPQ8IWB1 547 aa4.41□□□□□ -1.7
MACF1-201ENST00000289893 SRPK2P78362 688 aaKnown RBP4.41□□□□□ -1.7
MACF1-201ENST00000289893 CALD1Q05682 793 aaKnown RBP4.41□□□□□ -1.7
MACF1-201ENST00000289893 TRIM6-TRIM34B2RNG4 842 aa4.41□□□□□ -1.7
MACF1-201ENST00000289893 MORC1Q86VD1 984 aa4.41□□□□□ -1.7
MACF1-201ENST00000289893 GORABQ5T7V8 394 aa4.41□□□□□ -1.7
MACF1-201ENST00000289893 CFAP44Q96MT7 982 aa4.41□□□□□ -1.7
MACF1-201ENST00000289893 PES1O00541 588 aaKnown RBP4.41□□□□□ -1.7
MACF1-201ENST00000289893 WWC1Q8IX03 1113 aa4.41□□□□□ -1.7
MACF1-201ENST00000289893 CHMP3Q9Y3E7 222 aa4.41□□□□□ -1.7
MACF1-201ENST00000289893 AK9Q5TCS8 1911 aa4.41□□□□□ -1.7
MACF1-201ENST00000289893 SIN3AQ96ST3 1273 aa4.4□□□□□ -1.7
MACF1-201ENST00000289893 RAPGEF2Q9Y4G8 1499 aa4.4□□□□□ -1.7
MACF1-201ENST00000289893 TEX35Q5T0J7 233 aa4.4□□□□□ -1.7
MACF1-201ENST00000289893 CCDC66A2RUB6 948 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms