RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 CLSTN1O94985 981 aa11.45□□□□□ -0.58
SMC2-201ENST00000286398 KIAA1211Q6ZU35 1233 aa11.44□□□□□ -0.58
SMC2-201ENST00000286398 TPM4P67936 248 aa11.44□□□□□ -0.58
SMC2-201ENST00000286398 RCAN3Q9UKA8 241 aa11.43□□□□□ -0.58
SMC2-201ENST00000286398 APBB1O00213 710 aa11.42□□□□□ -0.58
SMC2-201ENST00000286398 GSE1Q14687 1217 aa11.42□□□□□ -0.58
SMC2-201ENST00000286398 RWDD1Q9H446 243 aaPredicted RBP11.42□□□□□ -0.58
SMC2-201ENST00000286398 MFAP1P55081 439 aaKnown RBP11.42□□□□□ -0.58
SMC2-201ENST00000286398 PDE4CQ08493 712 aa11.42□□□□□ -0.58
SMC2-201ENST00000286398 TAF7LQ5H9L4 462 aa11.42□□□□□ -0.58
SMC2-201ENST00000286398 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
SMC2-201ENST00000286398 GOLGA2Q08379 1002 aa11.41□□□□□ -0.58
SMC2-201ENST00000286398 CCDC180Q9P1Z9 1646 aa11.41□□□□□ -0.58
SMC2-201ENST00000286398 IPO8O15397 1037 aaKnown RBP11.39□□□□□ -0.59
SMC2-201ENST00000286398 PHF14O94880 888 aa11.38□□□□□ -0.59
SMC2-201ENST00000286398 HAP1P54257 671 aaPredicted RBP11.38□□□□□ -0.59
SMC2-201ENST00000286398 FAM13BQ9NYF5 915 aa11.38□□□□□ -0.59
SMC2-201ENST00000286398 DDX11L8A8MPP1 907 aa11.37□□□□□ -0.59
SMC2-201ENST00000286398 CEP162Q5TB80 1403 aa11.37□□□□□ -0.59
SMC2-201ENST00000286398 TPM3P06753 285 aa11.37□□□□□ -0.59
SMC2-201ENST00000286398 CSPP1Q1MSJ5 1256 aa11.37□□□□□ -0.59
SMC2-201ENST00000286398 FOXD4L1Q9NU39 408 aa11.37□□□□□ -0.59
SMC2-201ENST00000286398 RSF1Q96T23 1441 aaPredicted RBP11.37□□□□□ -0.59
SMC2-201ENST00000286398 CCDC34Q96HJ3 373 aa11.37□□□□□ -0.59
SMC2-201ENST00000286398 TMF1P82094 1093 aa11.36□□□□□ -0.59
SMC2-201ENST00000286398 PRM3Q9NNZ6 103 aa11.36□□□□□ -0.59
SMC2-201ENST00000286398 ABCC9O60706 1549 aa11.36□□□□□ -0.59
SMC2-201ENST00000286398 PMFBP1Q8TBY8 1022 aa11.35□□□□□ -0.59
SMC2-201ENST00000286398 POGKQ9P215 609 aa11.35□□□□□ -0.59
SMC2-201ENST00000286398 DDX49Q9Y6V7 483 aaKnown RBP11.35□□□□□ -0.59
SMC2-201ENST00000286398 ITPRIPQ8IWB1 547 aa11.34□□□□□ -0.59
SMC2-201ENST00000286398 GPS2Q13227 327 aa11.34□□□□□ -0.59
SMC2-201ENST00000286398 NPHP1O15259 732 aa11.34□□□□□ -0.59
SMC2-201ENST00000286398 CCAR2Q8N163 923 aaKnown RBP11.34□□□□□ -0.59
SMC2-201ENST00000286398 ISY1Q9ULR0 285 aaKnown RBP11.33□□□□□ -0.6
SMC2-201ENST00000286398 ZCCHC6Q5VYS8 1495 aaKnown RBP11.33□□□□□ -0.6
SMC2-201ENST00000286398 MYO15BQ96JP2 1530 aa11.33□□□□□ -0.6
SMC2-201ENST00000286398 HSP90B1P14625 803 aaKnown RBP11.33□□□□□ -0.6
SMC2-201ENST00000286398 SLC4A3P48751 1232 aa11.32□□□□□ -0.6
SMC2-201ENST00000286398 MORC1Q86VD1 984 aa11.32□□□□□ -0.6
SMC2-201ENST00000286398 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
SMC2-201ENST00000286398 NOL8Q76FK4 1167 aaKnown RBP11.31□□□□□ -0.6
SMC2-201ENST00000286398 HSPA5P11021 654 aaKnown RBP11.31□□□□□ -0.6
SMC2-201ENST00000286398 SKOR2Q2VWA4 1001 aaPredicted RBP11.31□□□□□ -0.6
SMC2-201ENST00000286398 CFDP1Q9UEE9 299 aaPredicted RBP11.31□□□□□ -0.6
SMC2-201ENST00000286398 PLEKHD1A6NEE1 506 aa11.31□□□□□ -0.6
SMC2-201ENST00000286398 FOXD4L5Q5VV16 416 aaPredicted RBP11.31□□□□□ -0.6
SMC2-201ENST00000286398 LMOD2Q6P5Q4 547 aa11.31□□□□□ -0.6
SMC2-201ENST00000286398 FOXD4L4Q8WXT5 416 aaPredicted RBP11.31□□□□□ -0.6
SMC2-201ENST00000286398 ST18O60284 1047 aa11.3□□□□□ -0.6
SMC2-201ENST00000286398 CREBRFQ8IUR6 639 aa11.3□□□□□ -0.6
SMC2-201ENST00000286398 TEX35Q5T0J7 233 aa11.3□□□□□ -0.6
SMC2-201ENST00000286398 PDE4AP27815 886 aa11.29□□□□□ -0.6
SMC2-201ENST00000286398 RRP12Q5JTH9 1297 aaKnown RBP11.29□□□□□ -0.6
SMC2-201ENST00000286398 NOM1Q5C9Z4 860 aaKnown RBP11.29□□□□□ -0.6
SMC2-201ENST00000286398 KTN1Q86UP2 1357 aaKnown RBP11.29□□□□□ -0.6
SMC2-201ENST00000286398 DCAF11Q8TEB1 546 aa11.29□□□□□ -0.6
SMC2-201ENST00000286398 FAM43AQ8N2R8 423 aa11.29□□□□□ -0.6
SMC2-201ENST00000286398 ZNF592Q92610 1267 aa11.29□□□□□ -0.6
SMC2-201ENST00000286398 FANCIQ9NVI1 1328 aa11.29□□□□□ -0.6
SMC2-201ENST00000286398 GOLGA3Q08378 1498 aa11.29□□□□□ -0.6
SMC2-201ENST00000286398 GOLGA6L19H0YKK7 550 aa11.28□□□□□ -0.6
SMC2-201ENST00000286398 KCNH8Q96L42 1107 aa11.28□□□□□ -0.6
SMC2-201ENST00000286398 TRIM6-TRIM34B2RNG4 842 aa11.28□□□□□ -0.6
SMC2-201ENST00000286398 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.28□□□□□ -0.6
SMC2-201ENST00000286398 CEP89Q96ST8 783 aa11.28□□□□□ -0.6
SMC2-201ENST00000286398 BECN2A8MW95 431 aa11.27□□□□□ -0.6
SMC2-201ENST00000286398 SF3A1Q15459 793 aaKnown RBP11.27□□□□□ -0.6
SMC2-201ENST00000286398 RTF1Q92541 710 aaKnown RBP11.27□□□□□ -0.61
SMC2-201ENST00000286398 CLUAP1Q96AJ1 413 aa11.27□□□□□ -0.61
SMC2-201ENST00000286398 RASSF8Q8NHQ8 419 aa11.26□□□□□ -0.61
SMC2-201ENST00000286398 KIF16BQ96L93 1317 aa11.26□□□□□ -0.61
SMC2-201ENST00000286398 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
SMC2-201ENST00000286398 FAM161AQ3B820 660 aa11.26□□□□□ -0.61
SMC2-201ENST00000286398 U2AF1L5P0DN76 240 aaPredicted RBP11.25□□□□□ -0.61
SMC2-201ENST00000286398 U2AF1Q01081 240 aaKnown RBP eCLIP11.25□□□□□ -0.61
SMC2-201ENST00000286398 SMC4Q9NTJ3 1288 aa11.25□□□□□ -0.61
SMC2-201ENST00000286398 KIF3AQ9Y496 699 aa11.25□□□□□ -0.61
SMC2-201ENST00000286398 RALBP1Q15311 655 aa11.25□□□□□ -0.61
SMC2-201ENST00000286398 CCDC70Q6NSX1 233 aa11.25□□□□□ -0.61
SMC2-201ENST00000286398 EEA1Q15075 1411 aa11.25□□□□□ -0.61
SMC2-201ENST00000286398 HMMRO75330 724 aa11.25□□□□□ -0.61
SMC2-201ENST00000286398 TSR1Q2NL82 804 aaKnown RBP11.24□□□□□ -0.61
SMC2-201ENST00000286398 SOX12O15370 315 aa11.24□□□□□ -0.61
SMC2-201ENST00000286398 PES1O00541 588 aaKnown RBP11.24□□□□□ -0.61
SMC2-201ENST00000286398 PDE3BQ13370 1112 aa11.23□□□□□ -0.61
SMC2-201ENST00000286398 ATP6V1DQ9Y5K8 247 aa11.23□□□□□ -0.61
SMC2-201ENST00000286398 FOXD4L6Q3SYB3 417 aaPredicted RBP11.23□□□□□ -0.61
SMC2-201ENST00000286398 FOXD4L3Q6VB84 417 aaPredicted RBP11.23□□□□□ -0.61
SMC2-201ENST00000286398 MAP7D2Q96T17 732 aa11.23□□□□□ -0.61
SMC2-201ENST00000286398 SRPK2P78362 688 aaKnown RBP11.22□□□□□ -0.61
SMC2-201ENST00000286398 CCNB3Q8WWL7 1395 aa11.22□□□□□ -0.61
SMC2-201ENST00000286398 CHMP7Q8WUX9 453 aaPredicted RBP11.22□□□□□ -0.61
SMC2-201ENST00000286398 GPATCH3Q96I76 525 aa11.22□□□□□ -0.61
SMC2-201ENST00000286398 TNIKQ9UKE5 1360 aa11.22□□□□□ -0.61
SMC2-201ENST00000286398 CENPQQ7L2Z9 268 aaPredicted RBP11.22□□□□□ -0.61
SMC2-201ENST00000286398 MTERF4Q7Z6M4 381 aaKnown RBP11.22□□□□□ -0.61
SMC2-201ENST00000286398 TPM1P09493 284 aa11.21□□□□□ -0.61
SMC2-201ENST00000286398 PLCD4Q9BRC7 762 aa11.21□□□□□ -0.61
SMC2-201ENST00000286398 TPD52L1Q16890 204 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms