RNA–Protein interactions for RNA: ENST00000284384.6

PRKCA-201, Transcript of protein kinase C alpha, humanhuman

TSL 5

Gene PRKCA, Length 2,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-201ENST00000284384 KIAA0586Q9BVV6 1533 aa11.56□□□□□ -0.56
PRKCA-201ENST00000284384 SYNJ2O15056 1496 aa11.56□□□□□ -0.56
PRKCA-201ENST00000284384 TSHZ2Q9NRE2 1034 aa11.55□□□□□ -0.56
PRKCA-201ENST00000284384 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
PRKCA-201ENST00000284384 FGD6Q6ZV73 1430 aa11.54□□□□□ -0.56
PRKCA-201ENST00000284384 GRIN2AQ12879 1464 aa11.53□□□□□ -0.56
PRKCA-201ENST00000284384 SETD5Q9C0A6 1442 aa11.53□□□□□ -0.56
PRKCA-201ENST00000284384 TCOF1Q13428 1488 aaKnown RBP11.52□□□□□ -0.56
PRKCA-201ENST00000284384 GCC2Q8IWJ2 1684 aa11.52□□□□□ -0.57
PRKCA-201ENST00000284384 MYOM3Q5VTT5 1437 aa11.51□□□□□ -0.57
PRKCA-201ENST00000284384 ZNF316A6NFI3 1004 aaPredicted RBP11.51□□□□□ -0.57
PRKCA-201ENST00000284384 YTHDC1Q96MU7 727 aaKnown RBP11.51□□□□□ -0.57
PRKCA-201ENST00000284384 BCL11AQ9H165 835 aa11.51□□□□□ -0.57
PRKCA-201ENST00000284384 MAPKBP1O60336 1514 aa11.5□□□□□ -0.57
PRKCA-201ENST00000284384 AKNAQ7Z591 1439 aa11.5□□□□□ -0.57
PRKCA-201ENST00000284384 NCOA2Q15596 1464 aa11.5□□□□□ -0.57
PRKCA-201ENST00000284384 PTPN23Q9H3S7 1636 aa11.5□□□□□ -0.57
PRKCA-201ENST00000284384 CNKSR2Q8WXI2 1034 aa11.5□□□□□ -0.57
PRKCA-201ENST00000284384 CCDC9Q9Y3X0 531 aaKnown RBP11.5□□□□□ -0.57
PRKCA-201ENST00000284384 EPRSP07814 1512 aaKnown RBP11.49□□□□□ -0.57
PRKCA-201ENST00000284384 MTUS2Q5JR59 1369 aa11.49□□□□□ -0.57
PRKCA-201ENST00000284384 RAB3GAP2Q9H2M9 1393 aa11.49□□□□□ -0.57
PRKCA-201ENST00000284384 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.49□□□□□ -0.57
PRKCA-201ENST00000284384 RAPGEF6Q8TEU7 1601 aa11.49□□□□□ -0.57
PRKCA-201ENST00000284384 SHROOM2Q13796 1616 aa11.48□□□□□ -0.57
PRKCA-201ENST00000284384 ADCY10Q96PN6 1610 aa11.48□□□□□ -0.57
PRKCA-201ENST00000284384 DISP1Q96F81 1524 aa11.48□□□□□ -0.57
PRKCA-201ENST00000284384 MIA2Q96PC5 1412 aa11.47□□□□□ -0.57
PRKCA-201ENST00000284384 HFM1A2PYH4 1435 aa11.47□□□□□ -0.57
PRKCA-201ENST00000284384 UBE2Q2Q8WVN8 375 aa11.47□□□□□ -0.57
PRKCA-201ENST00000284384 MAGI3Q5TCQ9 1506 aa11.46□□□□□ -0.57
PRKCA-201ENST00000284384 CEP170Q5SW79 1584 aa11.46□□□□□ -0.58
PRKCA-201ENST00000284384 ITSN2Q9NZM3 1697 aa11.46□□□□□ -0.58
PRKCA-201ENST00000284384 NUP160Q12769 1436 aa11.45□□□□□ -0.58
PRKCA-201ENST00000284384 DHX37Q8IY37 1157 aaKnown RBP11.44□□□□□ -0.58
PRKCA-201ENST00000284384 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
PRKCA-201ENST00000284384 BBXQ8WY36 941 aaPredicted RBP11.41□□□□□ -0.58
PRKCA-201ENST00000284384 NPM1P06748 294 aaKnown RBP eCLIP11.4□□□□□ -0.58
PRKCA-201ENST00000284384 ARID3AQ99856 593 aa11.4□□□□□ -0.58
PRKCA-201ENST00000284384 UACAQ9BZF9 1416 aa11.4□□□□□ -0.58
PRKCA-201ENST00000284384 DNMT1P26358 1616 aaKnown RBP11.4□□□□□ -0.59
PRKCA-201ENST00000284384 NUP153P49790 1475 aaKnown RBP11.39□□□□□ -0.59
PRKCA-201ENST00000284384 HSP90B1P14625 803 aaKnown RBP11.39□□□□□ -0.59
PRKCA-201ENST00000284384 TRHP20396 242 aaPredicted RBP11.38□□□□□ -0.59
PRKCA-201ENST00000284384 CHMP7Q8WUX9 453 aaPredicted RBP11.38□□□□□ -0.59
PRKCA-201ENST00000284384 ADGBQ8N7X0 1667 aa11.38□□□□□ -0.59
PRKCA-201ENST00000284384 CDK13Q14004 1512 aaKnown RBP11.38□□□□□ -0.59
PRKCA-201ENST00000284384 CROCC2H7BZ55 1655 aa11.38□□□□□ -0.59
PRKCA-201ENST00000284384 PKD2Q13563 968 aa11.37□□□□□ -0.59
PRKCA-201ENST00000284384 CARMIL2Q6F5E8 1435 aa11.37□□□□□ -0.59
PRKCA-201ENST00000284384 NAIPQ13075 1403 aa11.37□□□□□ -0.59
PRKCA-201ENST00000284384 ABCA8O94911 1581 aa11.36□□□□□ -0.59
PRKCA-201ENST00000284384 FAM50AQ14320 339 aaKnown RBP11.36□□□□□ -0.59
PRKCA-201ENST00000284384 HMGB1P09429 215 aaKnown RBP11.35□□□□□ -0.59
PRKCA-201ENST00000284384 BRD2P25440 801 aaKnown RBP11.35□□□□□ -0.59
PRKCA-201ENST00000284384 ROCK1Q13464 1354 aa11.35□□□□□ -0.59
PRKCA-201ENST00000284384 MIER1Q8N108 512 aa11.34□□□□□ -0.59
PRKCA-201ENST00000284384 PTPRKQ15262 1439 aa11.33□□□□□ -0.6
PRKCA-201ENST00000284384 SENP3Q9H4L4 574 aaPredicted RBP11.33□□□□□ -0.6
PRKCA-201ENST00000284384 ATP1B4Q9UN42 357 aaPredicted RBP11.33□□□□□ -0.6
PRKCA-201ENST00000284384 TROQ12816 1431 aaPredicted RBP11.33□□□□□ -0.6
PRKCA-201ENST00000284384 CYB5RLQ6IPT4 315 aa11.32□□□□□ -0.6
PRKCA-201ENST00000284384 ANP32EQ9BTT0 268 aa11.32□□□□□ -0.6
PRKCA-201ENST00000284384 NECTIN2Q92692 538 aa11.32□□□□□ -0.6
PRKCA-201ENST00000284384 KIF14Q15058 1648 aa11.31□□□□□ -0.6
PRKCA-201ENST00000284384 ZBTB7CA1YPR0 619 aa11.31□□□□□ -0.6
PRKCA-201ENST00000284384 PDE4CQ08493 712 aa11.3□□□□□ -0.6
PRKCA-201ENST00000284384 ADGRL2O95490 1459 aa11.29□□□□□ -0.6
PRKCA-201ENST00000284384 CDC42BPAQ5VT25 1732 aa11.29□□□□□ -0.6
PRKCA-201ENST00000284384 DAPK1P53355 1430 aa11.29□□□□□ -0.6
PRKCA-201ENST00000284384 ITGAEP38570 1179 aa11.29□□□□□ -0.6
PRKCA-201ENST00000284384 SHANK2Q9UPX8 1470 aa11.28□□□□□ -0.6
PRKCA-201ENST00000284384 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
PRKCA-201ENST00000284384 CAMSAP2Q08AD1 1489 aa11.26□□□□□ -0.61
PRKCA-201ENST00000284384 KIF13AQ9H1H9 1805 aa11.25□□□□□ -0.61
PRKCA-201ENST00000284384 ARHGEF5Q12774 1597 aa11.25□□□□□ -0.61
PRKCA-201ENST00000284384 PLB1Q6P1J6 1458 aa11.24□□□□□ -0.61
PRKCA-201ENST00000284384 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
PRKCA-201ENST00000284384 PUS7Q96PZ0 661 aaKnown RBP11.23□□□□□ -0.61
PRKCA-201ENST00000284384 PREX2Q70Z35 1606 aa11.23□□□□□ -0.61
PRKCA-201ENST00000284384 ABCC10Q5T3U5 1492 aa11.23□□□□□ -0.61
PRKCA-201ENST00000284384 GPATCH8Q9UKJ3 1502 aaKnown RBP11.23□□□□□ -0.61
PRKCA-201ENST00000284384 SUPT16HQ9Y5B9 1047 aaKnown RBP11.23□□□□□ -0.61
PRKCA-201ENST00000284384 ABCC5O15440 1437 aa11.23□□□□□ -0.61
PRKCA-201ENST00000284384 KDM5BQ9UGL1 1544 aa11.23□□□□□ -0.61
PRKCA-201ENST00000284384 KDM6BO15054 1643 aa11.22□□□□□ -0.61
PRKCA-201ENST00000284384 JPH4Q96JJ6 628 aa11.21□□□□□ -0.62
PRKCA-201ENST00000284384 POLR1AO95602 1720 aaPredicted RBP11.2□□□□□ -0.62
PRKCA-201ENST00000284384 ERCC6L2Q5T890 1561 aa11.2□□□□□ -0.62
PRKCA-201ENST00000284384 KDM5DQ9BY66 1539 aa11.2□□□□□ -0.62
PRKCA-201ENST00000284384 DENND4BO75064 1496 aaPredicted RBP11.2□□□□□ -0.62
PRKCA-201ENST00000284384 TAF7LQ5H9L4 462 aa11.2□□□□□ -0.62
PRKCA-201ENST00000284384 C1orf115Q9H7X2 142 aa11.2□□□□□ -0.62
PRKCA-201ENST00000284384 TONSLQ96HA7 1378 aa11.2□□□□□ -0.62
PRKCA-201ENST00000284384 ATP10BO94823 1461 aa11.19□□□□□ -0.62
PRKCA-201ENST00000284384 PRG4Q92954 1404 aaPredicted RBP11.19□□□□□ -0.62
PRKCA-201ENST00000284384 MAST1Q9Y2H9 1570 aa11.19□□□□□ -0.62
PRKCA-201ENST00000284384 PPP1R15AO75807 674 aaPredicted RBP11.18□□□□□ -0.62
PRKCA-201ENST00000284384 ABCC2Q92887 1545 aa11.17□□□□□ -0.62
PRKCA-201ENST00000284384 CDC42BPBQ9Y5S2 1711 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms