RNA–Protein interactions for RNA: ENST00000283882.3

CFDP1-201, Transcript of craniofacial development protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFDP1, Length 1,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-201ENST00000283882 MAPKBP1O60336 1514 aa18.98■□□□□ 0.63
CFDP1-201ENST00000283882 PREX2Q70Z35 1606 aa18.97■□□□□ 0.63
CFDP1-201ENST00000283882 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.97■□□□□ 0.63
CFDP1-201ENST00000283882 NPM1P06748 294 aaKnown RBP eCLIP18.96■□□□□ 0.63
CFDP1-201ENST00000283882 ASXL2Q76L83 1435 aa18.96■□□□□ 0.63
CFDP1-201ENST00000283882 TTC37Q6PGP7 1564 aa18.96■□□□□ 0.63
CFDP1-201ENST00000283882 ARAP3Q8WWN8 1544 aa18.95■□□□□ 0.62
CFDP1-201ENST00000283882 MYO5CQ9NQX4 1742 aa18.93■□□□□ 0.62
CFDP1-201ENST00000283882 ABCA9Q8IUA7 1624 aa18.92■□□□□ 0.62
CFDP1-201ENST00000283882 CYB5RLQ6IPT4 315 aa18.9■□□□□ 0.62
CFDP1-201ENST00000283882 CAMSAP2Q08AD1 1489 aa18.89■□□□□ 0.61
CFDP1-201ENST00000283882 CDC42BPBQ9Y5S2 1711 aa18.88■□□□□ 0.61
CFDP1-201ENST00000283882 FAM50AQ14320 339 aaKnown RBP18.88■□□□□ 0.61
CFDP1-201ENST00000283882 CFDP1Q9UEE9 299 aaPredicted RBP18.88■□□□□ 0.61
CFDP1-201ENST00000283882 PLCH2O75038 1416 aa18.87■□□□□ 0.61
CFDP1-201ENST00000283882 DNMT1P26358 1616 aaKnown RBP18.87■□□□□ 0.61
CFDP1-201ENST00000283882 PLEKHH2Q8IVE3 1493 aa18.85■□□□□ 0.61
CFDP1-201ENST00000283882 AKNAQ7Z591 1439 aa18.84■□□□□ 0.61
CFDP1-201ENST00000283882 ARHGEF5Q12774 1597 aa18.84■□□□□ 0.61
CFDP1-201ENST00000283882 ARHGAP5Q13017 1502 aa18.84■□□□□ 0.61
CFDP1-201ENST00000283882 GLI2P10070 1586 aa18.83■□□□□ 0.6
CFDP1-201ENST00000283882 SAMD9LQ8IVG5 1584 aa18.82■□□□□ 0.6
CFDP1-201ENST00000283882 KCNH8Q96L42 1107 aa18.81■□□□□ 0.6
CFDP1-201ENST00000283882 SHANK2Q9UPX8 1470 aa18.81■□□□□ 0.6
CFDP1-201ENST00000283882 CROCC2H7BZ55 1655 aa18.81■□□□□ 0.6
CFDP1-201ENST00000283882 DAPK1P53355 1430 aa18.81■□□□□ 0.6
CFDP1-201ENST00000283882 KIAA1107Q9UPP5 1409 aa18.81■□□□□ 0.6
CFDP1-201ENST00000283882 PTPRKQ15262 1439 aa18.79■□□□□ 0.6
CFDP1-201ENST00000283882 CFAP74Q9C0B2 1584 aa18.78■□□□□ 0.6
CFDP1-201ENST00000283882 ABCC5O15440 1437 aa18.78■□□□□ 0.6
CFDP1-201ENST00000283882 ROCK1Q13464 1354 aa18.78■□□□□ 0.6
CFDP1-201ENST00000283882 HFM1A2PYH4 1435 aa18.77■□□□□ 0.6
CFDP1-201ENST00000283882 ABCC1P33527 1531 aa18.77■□□□□ 0.6
CFDP1-201ENST00000283882 MBD5Q9P267 1494 aa18.77■□□□□ 0.59
CFDP1-201ENST00000283882 EFCAB2Q5VUJ9 269 aa18.76■□□□□ 0.59
CFDP1-201ENST00000283882 ADGRL2O95490 1459 aa18.76■□□□□ 0.59
CFDP1-201ENST00000283882 DIP2BQ9P265 1576 aa18.76■□□□□ 0.59
CFDP1-201ENST00000283882 ZNF644Q9H582 1327 aaPredicted RBP18.75■□□□□ 0.59
CFDP1-201ENST00000283882 RSPH4AQ5TD94 716 aa18.75■□□□□ 0.59
CFDP1-201ENST00000283882 CCDC141Q6ZP82 1450 aa18.75■□□□□ 0.59
CFDP1-201ENST00000283882 ADGBQ8N7X0 1667 aa18.75■□□□□ 0.59
CFDP1-201ENST00000283882 MAP3K4Q9Y6R4 1608 aa18.74■□□□□ 0.59
CFDP1-201ENST00000283882 GCC2Q8IWJ2 1684 aa18.74■□□□□ 0.59
CFDP1-201ENST00000283882 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
CFDP1-201ENST00000283882 SETD5Q9C0A6 1442 aa18.74■□□□□ 0.59
CFDP1-201ENST00000283882 MAST1Q9Y2H9 1570 aa18.73■□□□□ 0.59
CFDP1-201ENST00000283882 FANCAO15360 1455 aa18.73■□□□□ 0.59
CFDP1-201ENST00000283882 ITGAEP38570 1179 aa18.73■□□□□ 0.59
CFDP1-201ENST00000283882 CD109Q6YHK3 1445 aa18.73■□□□□ 0.59
CFDP1-201ENST00000283882 HRCP23327 699 aa18.72■□□□□ 0.59
CFDP1-201ENST00000283882 ZNF777Q9ULD5 760 aaPredicted RBP18.71■□□□□ 0.59
CFDP1-201ENST00000283882 DCAF8L1A6NGE4 600 aa18.7■□□□□ 0.58
CFDP1-201ENST00000283882 NAIPQ13075 1403 aa18.7■□□□□ 0.58
CFDP1-201ENST00000283882 NEO1Q92859 1461 aa18.7■□□□□ 0.58
CFDP1-201ENST00000283882 C9orf84Q5VXU9 1444 aa18.68■□□□□ 0.58
CFDP1-201ENST00000283882 DNAJC5Q9H3Z4 198 aa18.68■□□□□ 0.58
CFDP1-201ENST00000283882 ARHGEF12Q9NZN5 1544 aa18.67■□□□□ 0.58
CFDP1-201ENST00000283882 RAB3GAP2Q9H2M9 1393 aa18.67■□□□□ 0.58
CFDP1-201ENST00000283882 ACIN1Q9UKV3 1341 aaKnown RBP18.66■□□□□ 0.58
CFDP1-201ENST00000283882 NCOA1Q15788 1441 aa18.66■□□□□ 0.58
CFDP1-201ENST00000283882 ADGRL1O94910 1474 aa18.65■□□□□ 0.58
CFDP1-201ENST00000283882 ANKRD30AQ9BXX3 1397 aa18.65■□□□□ 0.58
CFDP1-201ENST00000283882 PLXNC1O60486 1568 aa18.64■□□□□ 0.58
CFDP1-201ENST00000283882 TSPY4P0CV99 314 aa18.62■□□□□ 0.57
CFDP1-201ENST00000283882 TSPY10P0CW01 314 aa18.62■□□□□ 0.57
CFDP1-201ENST00000283882 HNRNPMP52272 730 aaKnown RBP eCLIP18.62■□□□□ 0.577e-9■■■■■ 32.7
CFDP1-201ENST00000283882 RTEL1-TNFRSF6BF6WH68 1400 aa18.62■□□□□ 0.57
CFDP1-201ENST00000283882 TEX14Q8IWB6 1497 aa18.61■□□□□ 0.57
CFDP1-201ENST00000283882 KIF13AQ9H1H9 1805 aa18.6■□□□□ 0.57
CFDP1-201ENST00000283882 TRAPPC8Q9Y2L5 1435 aa18.6■□□□□ 0.57
CFDP1-201ENST00000283882 HOXD11P31277 338 aaPredicted RBP18.6■□□□□ 0.57
CFDP1-201ENST00000283882 ZNF518AQ6AHZ1 1483 aa18.59■□□□□ 0.57
CFDP1-201ENST00000283882 SCAPERQ9BY12 1400 aa18.59■□□□□ 0.57
CFDP1-201ENST00000283882 PPP4R3CPQ6ZMV5 832 aa18.59■□□□□ 0.57
CFDP1-201ENST00000283882 INO80Q9ULG1 1556 aaPredicted RBP18.59■□□□□ 0.57
CFDP1-201ENST00000283882 ZFYVE16Q7Z3T8 1539 aa18.59■□□□□ 0.57
CFDP1-201ENST00000283882 PPRC1Q5VV67 1664 aaKnown RBP18.58■□□□□ 0.57
CFDP1-201ENST00000283882 FAM69CQ0P6D2 419 aa18.58■□□□□ 0.56
CFDP1-201ENST00000283882 CHIC2Q9UKJ5 165 aa18.58■□□□□ 0.56
CFDP1-201ENST00000283882 KDM5CP41229 1560 aa18.58■□□□□ 0.56
CFDP1-201ENST00000283882 POGZQ7Z3K3 1410 aa18.57■□□□□ 0.56
CFDP1-201ENST00000283882 CLSPNQ9HAW4 1339 aa18.56■□□□□ 0.56
CFDP1-201ENST00000283882 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
CFDP1-201ENST00000283882 KIF15Q9NS87 1388 aa18.55■□□□□ 0.56
CFDP1-201ENST00000283882 RRP7BPQ9NSQ0 103 aa18.55■□□□□ 0.56
CFDP1-201ENST00000283882 RNF39Q9H2S5 420 aa18.54■□□□□ 0.56
CFDP1-201ENST00000283882 ATP7AQ04656 1500 aa18.54■□□□□ 0.56
CFDP1-201ENST00000283882 DENND4BO75064 1496 aaPredicted RBP18.53■□□□□ 0.56
CFDP1-201ENST00000283882 ANKRD50Q9ULJ7 1429 aa18.53■□□□□ 0.56
CFDP1-201ENST00000283882 DUOX2Q9NRD8 1548 aa18.53■□□□□ 0.56
CFDP1-201ENST00000283882 KDM6BO15054 1643 aa18.52■□□□□ 0.56
CFDP1-201ENST00000283882 CCER1Q8TC90 406 aaPredicted RBP18.52■□□□□ 0.56
CFDP1-201ENST00000283882 MLH3Q9UHC1 1453 aa18.52■□□□□ 0.55
CFDP1-201ENST00000283882 SPAG9O60271 1321 aaKnown RBP18.51■□□□□ 0.55
CFDP1-201ENST00000283882 ERBINQ96RT1 1412 aa18.5■□□□□ 0.55
CFDP1-201ENST00000283882 RICTORQ6R327 1708 aa18.5■□□□□ 0.55
CFDP1-201ENST00000283882 ZEB1P37275 1124 aaPredicted RBP18.5■□□□□ 0.55
CFDP1-201ENST00000283882 HECW2Q9P2P5 1572 aa18.5■□□□□ 0.55
CFDP1-201ENST00000283882 ZMYM4Q5VZL5 1548 aa18.49■□□□□ 0.55
CFDP1-201ENST00000283882 KDM5DQ9BY66 1539 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms