RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.54□□□□□ -1.04
TNFSF4-201ENST00000281834 PTPRGP23470 1445 aa8.54□□□□□ -1.04
TNFSF4-201ENST00000281834 TSPY4P0CV99 314 aa8.53□□□□□ -1.04
TNFSF4-201ENST00000281834 TSPY10P0CW01 314 aa8.53□□□□□ -1.04
TNFSF4-201ENST00000281834 ANP32CO43423 234 aa8.52□□□□□ -1.05
TNFSF4-201ENST00000281834 MYT1LQ9UL68 1186 aa8.52□□□□□ -1.05
TNFSF4-201ENST00000281834 KDM2AQ9Y2K7 1162 aa8.52□□□□□ -1.05
TNFSF4-201ENST00000281834 TROQ12816 1431 aaPredicted RBP8.52□□□□□ -1.05
TNFSF4-201ENST00000281834 DAPK1P53355 1430 aa8.51□□□□□ -1.05
TNFSF4-201ENST00000281834 PKD2Q13563 968 aa8.51□□□□□ -1.05
TNFSF4-201ENST00000281834 ABCC5O15440 1437 aa8.51□□□□□ -1.05
TNFSF4-201ENST00000281834 HSPA5P11021 654 aaKnown RBP8.51□□□□□ -1.05
TNFSF4-201ENST00000281834 TIMELESSQ9UNS1 1208 aa8.5□□□□□ -1.05
TNFSF4-201ENST00000281834 RAPGEF6Q8TEU7 1601 aa8.5□□□□□ -1.05
TNFSF4-201ENST00000281834 MIA2Q96PC5 1412 aa8.5□□□□□ -1.05
TNFSF4-201ENST00000281834 KDM6BO15054 1643 aa8.5□□□□□ -1.05
TNFSF4-201ENST00000281834 ARHGEF11O15085 1522 aa8.49□□□□□ -1.05
TNFSF4-201ENST00000281834 NUP160Q12769 1436 aa8.49□□□□□ -1.05
TNFSF4-201ENST00000281834 EIF4G2P78344 907 aaKnown RBP eCLIP8.48□□□□□ -1.05
TNFSF4-201ENST00000281834 BCANQ96GW7 911 aa8.48□□□□□ -1.05
TNFSF4-201ENST00000281834 SENP3-EIF4A1A0A087X0R7 540 aa8.48□□□□□ -1.05
TNFSF4-201ENST00000281834 RGL3Q3MIN7 710 aa8.48□□□□□ -1.05
TNFSF4-201ENST00000281834 NUP155O75694 1391 aa8.47□□□□□ -1.05
TNFSF4-201ENST00000281834 ATP10BO94823 1461 aa8.47□□□□□ -1.05
TNFSF4-201ENST00000281834 GPATCH8Q9UKJ3 1502 aaKnown RBP8.47□□□□□ -1.05
TNFSF4-201ENST00000281834 NBPF8Q3BBV2 869 aa8.47□□□□□ -1.05
TNFSF4-201ENST00000281834 KIF14Q15058 1648 aa8.47□□□□□ -1.05
TNFSF4-201ENST00000281834 CAMSAP2Q08AD1 1489 aa8.46□□□□□ -1.05
TNFSF4-201ENST00000281834 TCOF1Q13428 1488 aaKnown RBP8.46□□□□□ -1.05
TNFSF4-201ENST00000281834 ANKRD30AQ9BXX3 1397 aa8.45□□□□□ -1.06
TNFSF4-201ENST00000281834 NCOA1Q15788 1441 aa8.44□□□□□ -1.06
TNFSF4-201ENST00000281834 C11orf95C9JLR9 678 aaPredicted RBP8.44□□□□□ -1.06
TNFSF4-201ENST00000281834 WASHC2AQ641Q2 1341 aa8.43□□□□□ -1.06
TNFSF4-201ENST00000281834 ANKRD50Q9ULJ7 1429 aa8.43□□□□□ -1.06
TNFSF4-201ENST00000281834 DENND4BO75064 1496 aaPredicted RBP8.43□□□□□ -1.06
TNFSF4-201ENST00000281834 AKNAQ7Z591 1439 aa8.43□□□□□ -1.06
TNFSF4-201ENST00000281834 DCAF11Q8TEB1 546 aa8.42□□□□□ -1.06
TNFSF4-201ENST00000281834 ANKRD30BQ9BXX2 1392 aa8.42□□□□□ -1.06
TNFSF4-201ENST00000281834 KIF15Q9NS87 1388 aa8.42□□□□□ -1.06
TNFSF4-201ENST00000281834 FAM9BQ8IZU0 186 aa8.42□□□□□ -1.06
TNFSF4-201ENST00000281834 ERCC6L2Q5T890 1561 aa8.41□□□□□ -1.06
TNFSF4-201ENST00000281834 C9orf84Q5VXU9 1444 aa8.41□□□□□ -1.06
TNFSF4-201ENST00000281834 ROCK1Q13464 1354 aa8.41□□□□□ -1.06
TNFSF4-201ENST00000281834 HNRNPUQ00839 825 aaKnown RBP eCLIP8.41□□□□□ -1.06
TNFSF4-201ENST00000281834 AFAP1Q8N556 730 aa8.39□□□□□ -1.07
TNFSF4-201ENST00000281834 CARD11Q9BXL7 1154 aa8.39□□□□□ -1.07
TNFSF4-201ENST00000281834 DNMT1P26358 1616 aaKnown RBP8.39□□□□□ -1.07
TNFSF4-201ENST00000281834 FKBP8Q14318 412 aa8.38□□□□□ -1.07
TNFSF4-201ENST00000281834 CCDC184Q52MB2 194 aa8.38□□□□□ -1.07
TNFSF4-201ENST00000281834 ARHGAP5Q13017 1502 aa8.38□□□□□ -1.07
TNFSF4-201ENST00000281834 SENP3Q9H4L4 574 aaPredicted RBP8.38□□□□□ -1.07
TNFSF4-201ENST00000281834 ABCA8O94911 1581 aa8.37□□□□□ -1.07
TNFSF4-201ENST00000281834 IRX6P78412 446 aaPredicted RBP8.37□□□□□ -1.07
TNFSF4-201ENST00000281834 SUPT16HQ9Y5B9 1047 aaKnown RBP8.37□□□□□ -1.07
TNFSF4-201ENST00000281834 CHD1O14646 1710 aa8.37□□□□□ -1.07
TNFSF4-201ENST00000281834 EFCAB2Q5VUJ9 269 aa8.37□□□□□ -1.07
TNFSF4-201ENST00000281834 MRS2Q9HD23 443 aa8.37□□□□□ -1.07
TNFSF4-201ENST00000281834 PZPP20742 1482 aa8.36□□□□□ -1.07
TNFSF4-201ENST00000281834 GCC2Q8IWJ2 1684 aa8.36□□□□□ -1.07
TNFSF4-201ENST00000281834 KIAA1107Q9UPP5 1409 aa8.36□□□□□ -1.07
TNFSF4-201ENST00000281834 RPRD2Q5VT52 1461 aaKnown RBP8.36□□□□□ -1.07
TNFSF4-201ENST00000281834 ABCC10Q5T3U5 1492 aa8.35□□□□□ -1.07
TNFSF4-201ENST00000281834 KIF7Q2M1P5 1343 aa8.35□□□□□ -1.07
TNFSF4-201ENST00000281834 NEFLP07196 543 aa8.35□□□□□ -1.07
TNFSF4-201ENST00000281834 KDM5BQ9UGL1 1544 aa8.34□□□□□ -1.07
TNFSF4-201ENST00000281834 ST20-MTHFSA0A0A6YYL1 179 aa8.34□□□□□ -1.07
TNFSF4-201ENST00000281834 CCER2I3L3R5 266 aa8.34□□□□□ -1.07
TNFSF4-201ENST00000281834 USP47Q96K76 1375 aa8.34□□□□□ -1.07
TNFSF4-201ENST00000281834 NPM1P06748 294 aaKnown RBP eCLIP8.34□□□□□ -1.07
TNFSF4-201ENST00000281834 CCDC7Q96M83 1385 aa8.34□□□□□ -1.08
TNFSF4-201ENST00000281834 SYCP2Q9BX26 1530 aa8.33□□□□□ -1.08
TNFSF4-201ENST00000281834 ITSN2Q9NZM3 1697 aa8.33□□□□□ -1.08
TNFSF4-201ENST00000281834 SPAG9O60271 1321 aaKnown RBP8.33□□□□□ -1.08
TNFSF4-201ENST00000281834 NBPF1Q3BBV0 1214 aa8.33□□□□□ -1.08
TNFSF4-201ENST00000281834 CCDC141Q6ZP82 1450 aa8.32□□□□□ -1.08
TNFSF4-201ENST00000281834 KIF3BO15066 747 aa8.32□□□□□ -1.08
TNFSF4-201ENST00000281834 CHGAP10645 457 aaKnown RBP8.32□□□□□ -1.08
TNFSF4-201ENST00000281834 PRKRIP1Q9H875 184 aaPredicted RBP8.32□□□□□ -1.08
TNFSF4-201ENST00000281834 SALL2Q9Y467 1007 aaPredicted RBP8.32□□□□□ -1.08
TNFSF4-201ENST00000281834 PLEKHH2Q8IVE3 1493 aa8.32□□□□□ -1.08
TNFSF4-201ENST00000281834 CDC42BPAQ5VT25 1732 aa8.31□□□□□ -1.08
TNFSF4-201ENST00000281834 TEX14Q8IWB6 1497 aa8.31□□□□□ -1.08
TNFSF4-201ENST00000281834 MBD5Q9P267 1494 aa8.31□□□□□ -1.08
TNFSF4-201ENST00000281834 RSPH4AQ5TD94 716 aa8.31□□□□□ -1.08
TNFSF4-201ENST00000281834 ROCK2O75116 1388 aaKnown RBP8.31□□□□□ -1.08
TNFSF4-201ENST00000281834 OSCARQ8IYS5 282 aa8.3□□□□□ -1.08
TNFSF4-201ENST00000281834 CCDC144AA2RUR9 1427 aa8.3□□□□□ -1.08
TNFSF4-201ENST00000281834 TTC37Q6PGP7 1564 aa8.3□□□□□ -1.08
TNFSF4-201ENST00000281834 TRAPPC8Q9Y2L5 1435 aa8.29□□□□□ -1.08
TNFSF4-201ENST00000281834 ADGRL2O95490 1459 aa8.29□□□□□ -1.08
TNFSF4-201ENST00000281834 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.29□□□□□ -1.08
TNFSF4-201ENST00000281834 ABCC2Q92887 1545 aa8.29□□□□□ -1.08
TNFSF4-201ENST00000281834 SAMD9LQ8IVG5 1584 aa8.29□□□□□ -1.08
TNFSF4-201ENST00000281834 CNTLNQ9NXG0 1405 aa8.29□□□□□ -1.08
TNFSF4-201ENST00000281834 GGT6Q6P531 493 aa8.28□□□□□ -1.08
TNFSF4-201ENST00000281834 ADCY10Q96PN6 1610 aa8.27□□□□□ -1.09
TNFSF4-201ENST00000281834 CYB5RLQ6IPT4 315 aa8.27□□□□□ -1.09
TNFSF4-201ENST00000281834 TMC1Q8TDI8 760 aa8.27□□□□□ -1.09
TNFSF4-201ENST00000281834 SCAPERQ9BY12 1400 aa8.27□□□□□ -1.09
TNFSF4-201ENST00000281834 ARHGEF12Q9NZN5 1544 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms