RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
TMEM47-201ENST00000275954 CCER2I3L3R5 266 aa19.18■□□□□ 0.66
TMEM47-201ENST00000275954 CC2D1BQ5T0F9 858 aaKnown RBP19.18■□□□□ 0.66
TMEM47-201ENST00000275954 B4GALNT3Q6L9W6 998 aa19.18■□□□□ 0.66
TMEM47-201ENST00000275954 SPAG9O60271 1321 aaKnown RBP19.18■□□□□ 0.66
TMEM47-201ENST00000275954 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
TMEM47-201ENST00000275954 STK26Q9P289 416 aa19.17■□□□□ 0.66
TMEM47-201ENST00000275954 DNMBPQ6XZF7 1577 aa19.16■□□□□ 0.66
TMEM47-201ENST00000275954 RAPGEF3O95398 923 aa19.16■□□□□ 0.66
TMEM47-201ENST00000275954 NUP155O75694 1391 aa19.16■□□□□ 0.66
TMEM47-201ENST00000275954 PEG3Q9GZU2 1588 aa19.13■□□□□ 0.65
TMEM47-201ENST00000275954 PRDM2Q13029 1718 aa19.13■□□□□ 0.65
TMEM47-201ENST00000275954 LRRC9Q6ZRR7 1453 aa19.12■□□□□ 0.65
TMEM47-201ENST00000275954 LMOD2Q6P5Q4 547 aa19.11■□□□□ 0.65
TMEM47-201ENST00000275954 NUTM2FA1L443 756 aa19.1■□□□□ 0.65
TMEM47-201ENST00000275954 NBR1Q14596 966 aa19.1■□□□□ 0.65
TMEM47-201ENST00000275954 SOX12O15370 315 aa19.09■□□□□ 0.65
TMEM47-201ENST00000275954 WASHC2CQ9Y4E1 1318 aa19.09■□□□□ 0.65
TMEM47-201ENST00000275954 KNSTRNQ9Y448 316 aa19.08■□□□□ 0.64
TMEM47-201ENST00000275954 CCDC18Q5T9S5 1454 aa19.07■□□□□ 0.64
TMEM47-201ENST00000275954 ERICH3Q5RHP9 1530 aa19.06■□□□□ 0.64
TMEM47-201ENST00000275954 FGD6Q6ZV73 1430 aa19.06■□□□□ 0.64
TMEM47-201ENST00000275954 NEFMP07197 916 aa19.06■□□□□ 0.64
TMEM47-201ENST00000275954 TNNT2P45379 298 aaPredicted RBP19.06■□□□□ 0.64
TMEM47-201ENST00000275954 A0A0G2JS52 829 aa19.05■□□□□ 0.64
TMEM47-201ENST00000275954 NEUROD2Q15784 382 aa19.05■□□□□ 0.64
TMEM47-201ENST00000275954 RRBP1Q9P2E9 1410 aaKnown RBP19.04■□□□□ 0.64
TMEM47-201ENST00000275954 ABCA10Q8WWZ4 1543 aa19.03■□□□□ 0.64
TMEM47-201ENST00000275954 PLB1Q6P1J6 1458 aa19.02■□□□□ 0.64
TMEM47-201ENST00000275954 ANKRD30AQ9BXX3 1397 aa19.02■□□□□ 0.64
TMEM47-201ENST00000275954 PPM1GO15355 546 aaPredicted RBP19.02■□□□□ 0.63
TMEM47-201ENST00000275954 PPP4R2Q9NY27 417 aa19.02■□□□□ 0.63
TMEM47-201ENST00000275954 POGKQ9P215 609 aa18.97■□□□□ 0.63
TMEM47-201ENST00000275954 ST20-MTHFSA0A0A6YYL1 179 aa18.97■□□□□ 0.63
TMEM47-201ENST00000275954 TSHZ2Q9NRE2 1034 aa18.97■□□□□ 0.63
TMEM47-201ENST00000275954 ZBTB47Q9UFB7 747 aaPredicted RBP18.97■□□□□ 0.63
TMEM47-201ENST00000275954 MYOM3Q5VTT5 1437 aa18.96■□□□□ 0.63
TMEM47-201ENST00000275954 CASKIN1Q8WXD9 1431 aa18.96■□□□□ 0.63
TMEM47-201ENST00000275954 RBM19Q9Y4C8 960 aaKnown RBP18.95■□□□□ 0.62
TMEM47-201ENST00000275954 TMF1P82094 1093 aa18.95■□□□□ 0.62
TMEM47-201ENST00000275954 CDK13Q14004 1512 aaKnown RBP18.94■□□□□ 0.62
TMEM47-201ENST00000275954 NCOA2Q15596 1464 aa18.94■□□□□ 0.62
TMEM47-201ENST00000275954 KIF21AQ7Z4S6 1674 aa18.93■□□□□ 0.62
TMEM47-201ENST00000275954 ROCK2O75116 1388 aaKnown RBP18.93■□□□□ 0.62
TMEM47-201ENST00000275954 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.93■□□□□ 0.62
TMEM47-201ENST00000275954 PRKRIP1Q9H875 184 aaPredicted RBP18.93■□□□□ 0.62
TMEM47-201ENST00000275954 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
TMEM47-201ENST00000275954 CDCA8Q53HL2 280 aa18.9■□□□□ 0.62
TMEM47-201ENST00000275954 SYNJ2O15056 1496 aa18.9■□□□□ 0.62
TMEM47-201ENST00000275954 UACAQ9BZF9 1416 aa18.89■□□□□ 0.61
TMEM47-201ENST00000275954 KANK1Q14678 1352 aa18.88■□□□□ 0.61
TMEM47-201ENST00000275954 ANP32EQ9BTT0 268 aa18.87■□□□□ 0.61
TMEM47-201ENST00000275954 KIAA0586Q9BVV6 1533 aa18.86■□□□□ 0.61
TMEM47-201ENST00000275954 WASHC2AQ641Q2 1341 aa18.85■□□□□ 0.61
TMEM47-201ENST00000275954 SCAPERQ9BY12 1400 aa18.84■□□□□ 0.61
TMEM47-201ENST00000275954 TRAK1Q9UPV9 953 aa18.83■□□□□ 0.61
TMEM47-201ENST00000275954 SRPK2P78362 688 aaKnown RBP18.83■□□□□ 0.6
TMEM47-201ENST00000275954 TIAM1Q13009 1591 aa18.82■□□□□ 0.6
TMEM47-201ENST00000275954 RGS3P49796 1198 aa18.82■□□□□ 0.6
TMEM47-201ENST00000275954 FYCO1Q9BQS8 1478 aa18.82■□□□□ 0.6
TMEM47-201ENST00000275954 HAP1P54257 671 aaPredicted RBP18.81■□□□□ 0.6
TMEM47-201ENST00000275954 FRAT1Q92837 279 aaPredicted RBP18.81■□□□□ 0.6
TMEM47-201ENST00000275954 NBPF8Q3BBV2 869 aa18.8■□□□□ 0.6
TMEM47-201ENST00000275954 USP47Q96K76 1375 aa18.8■□□□□ 0.6
TMEM47-201ENST00000275954 KIF7Q2M1P5 1343 aa18.79■□□□□ 0.6
TMEM47-201ENST00000275954 KTN1Q86UP2 1357 aaKnown RBP18.79■□□□□ 0.6
TMEM47-201ENST00000275954 KIF15Q9NS87 1388 aa18.78■□□□□ 0.6
TMEM47-201ENST00000275954 CEBPAP49715 358 aaPredicted RBP18.77■□□□□ 0.6
TMEM47-201ENST00000275954 ARHGEF11O15085 1522 aa18.76■□□□□ 0.59
TMEM47-201ENST00000275954 U2SURPO15042 1029 aaKnown RBP18.76■□□□□ 0.59
TMEM47-201ENST00000275954 ARHGAP5Q13017 1502 aa18.75■□□□□ 0.59
TMEM47-201ENST00000275954 CFAP53Q96M91 514 aa18.75■□□□□ 0.59
TMEM47-201ENST00000275954 WDR97A6NE52 1622 aa18.75■□□□□ 0.59
TMEM47-201ENST00000275954 CCDC184Q52MB2 194 aa18.75■□□□□ 0.59
TMEM47-201ENST00000275954 PANK3Q9H999 370 aa18.75■□□□□ 0.59
TMEM47-201ENST00000275954 RCAN3Q9UKA8 241 aa18.75■□□□□ 0.59
TMEM47-201ENST00000275954 IQGAP2Q13576 1575 aa18.75■□□□□ 0.59
TMEM47-201ENST00000275954 RSPH4AQ5TD94 716 aa18.74■□□□□ 0.59
TMEM47-201ENST00000275954 RALBP1Q15311 655 aa18.74■□□□□ 0.59
TMEM47-201ENST00000275954 MAGI1Q96QZ7 1491 aaPredicted RBP18.74■□□□□ 0.59
TMEM47-201ENST00000275954 NUDCQ9Y266 331 aa18.74■□□□□ 0.59
TMEM47-201ENST00000275954 TMEM132EQ6IEE7 984 aa18.73■□□□□ 0.59
TMEM47-201ENST00000275954 UPF2Q9HAU5 1272 aaKnown RBP18.73■□□□□ 0.59
TMEM47-201ENST00000275954 PAK3O75914 559 aaPredicted RBP18.73■□□□□ 0.59
TMEM47-201ENST00000275954 CCDC7Q96M83 1385 aa18.73■□□□□ 0.59
TMEM47-201ENST00000275954 ARXQ96QS3 562 aa18.73■□□□□ 0.59
TMEM47-201ENST00000275954 NLRP13Q86W25 1043 aa18.72■□□□□ 0.59
TMEM47-201ENST00000275954 LAS1LQ9Y4W2 734 aaKnown RBP18.72■□□□□ 0.59
TMEM47-201ENST00000275954 CCDC144AA2RUR9 1427 aa18.71■□□□□ 0.59
TMEM47-201ENST00000275954 MORC1Q86VD1 984 aa18.71■□□□□ 0.59
TMEM47-201ENST00000275954 CCDC146Q8IYE0 955 aa18.71■□□□□ 0.59
TMEM47-201ENST00000275954 HFM1A2PYH4 1435 aa18.7■□□□□ 0.58
TMEM47-201ENST00000275954 RBM33Q96EV2 1170 aaKnown RBP18.7■□□□□ 0.58
TMEM47-201ENST00000275954 ANKRD50Q9ULJ7 1429 aa18.7■□□□□ 0.58
TMEM47-201ENST00000275954 NAIPQ13075 1403 aa18.69■□□□□ 0.58
TMEM47-201ENST00000275954 PCF11O94913 1555 aaKnown RBP18.68■□□□□ 0.58
TMEM47-201ENST00000275954 EPRSP07814 1512 aaKnown RBP18.68■□□□□ 0.58
TMEM47-201ENST00000275954 HSP90AA1P07900 732 aaKnown RBP18.67■□□□□ 0.58
TMEM47-201ENST00000275954 PLIN1O60240 522 aa18.66■□□□□ 0.58
TMEM47-201ENST00000275954 EFCAB5A4FU69 1503 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms