RNA–Protein interactions for RNA: ENST00000274026.9

CCNA2-201, Transcript of cyclin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNA2, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2-201ENST00000274026 THOC2Q8NI27 1593 aaKnown RBP22.4■■□□□ 1.18
CCNA2-201ENST00000274026 ANO8Q9HCE9 1232 aaPredicted RBP22.39■■□□□ 1.18
CCNA2-201ENST00000274026 SPATA31E1Q6ZUB1 1445 aa22.38■■□□□ 1.17
CCNA2-201ENST00000274026 TCOF1Q13428 1488 aaKnown RBP22.38■■□□□ 1.17
CCNA2-201ENST00000274026 KDM6BO15054 1643 aa22.38■■□□□ 1.17
CCNA2-201ENST00000274026 ARHGEF11O15085 1522 aa22.38■■□□□ 1.17
CCNA2-201ENST00000274026 RAD54L2Q9Y4B4 1467 aa22.37■■□□□ 1.17
CCNA2-201ENST00000274026 NBPF8Q3BBV2 869 aa22.37■■□□□ 1.17
CCNA2-201ENST00000274026 SAMD9Q5K651 1589 aa22.37■■□□□ 1.17
CCNA2-201ENST00000274026 RPRD2Q5VT52 1461 aaKnown RBP22.33■■□□□ 1.17
CCNA2-201ENST00000274026 FOXD1Q16676 465 aa22.33■■□□□ 1.16
CCNA2-201ENST00000274026 TEX14Q8IWB6 1497 aa22.31■■□□□ 1.16
CCNA2-201ENST00000274026 DNMBPQ6XZF7 1577 aa22.31■■□□□ 1.16
CCNA2-201ENST00000274026 DHX29Q7Z478 1369 aaKnown RBP22.3■■□□□ 1.16
CCNA2-201ENST00000274026 ANKRD30BQ9BXX2 1392 aa22.3■■□□□ 1.16
CCNA2-201ENST00000274026 POLA1P09884 1462 aaPredicted RBP22.29■■□□□ 1.16
CCNA2-201ENST00000274026 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
CCNA2-201ENST00000274026 MAGI3Q5TCQ9 1506 aa22.29■■□□□ 1.16
CCNA2-201ENST00000274026 SALL2Q9Y467 1007 aaPredicted RBP22.28■■□□□ 1.16
CCNA2-201ENST00000274026 IL27Q8NEV9 243 aa22.28■■□□□ 1.16
CCNA2-201ENST00000274026 USP35Q9P2H5 1018 aa22.25■■□□□ 1.15
CCNA2-201ENST00000274026 MIA2Q96PC5 1412 aa22.25■■□□□ 1.15
CCNA2-201ENST00000274026 TOPBP1Q92547 1522 aa22.23■■□□□ 1.15
CCNA2-201ENST00000274026 TCERG1O14776 1098 aaKnown RBP22.22■■□□□ 1.15
CCNA2-201ENST00000274026 NPM2Q86SE8 214 aaKnown RBP22.22■■□□□ 1.15
CCNA2-201ENST00000274026 PNISRQ8TF01 805 aaKnown RBP22.21■■□□□ 1.15
CCNA2-201ENST00000274026 CNGB1Q14028 1251 aaPredicted RBP22.21■■□□□ 1.15
CCNA2-201ENST00000274026 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.14
CCNA2-201ENST00000274026 NEFMP07197 916 aa22.2■■□□□ 1.14
CCNA2-201ENST00000274026 PDE4AP27815 886 aa22.17■■□□□ 1.14
CCNA2-201ENST00000274026 LAS1LQ9Y4W2 734 aaKnown RBP22.17■■□□□ 1.14
CCNA2-201ENST00000274026 TMC1Q8TDI8 760 aa22.16■■□□□ 1.14
CCNA2-201ENST00000274026 RTN4Q9NQC3 1192 aaKnown RBP22.16■■□□□ 1.14
CCNA2-201ENST00000274026 SENP3-EIF4A1A0A087X0R7 540 aa22.16■■□□□ 1.14
CCNA2-201ENST00000274026 RRP1P56182 461 aaKnown RBP22.16■■□□□ 1.14
CCNA2-201ENST00000274026 BCORL1Q5H9F3 1711 aa22.15■■□□□ 1.14
CCNA2-201ENST00000274026 POLR3GLQ9BT43 218 aa22.15■■□□□ 1.14
CCNA2-201ENST00000274026 ARID4BQ4LE39 1312 aaPredicted RBP22.15■■□□□ 1.14
CCNA2-201ENST00000274026 PPM1GO15355 546 aaPredicted RBP22.15■■□□□ 1.14
CCNA2-201ENST00000274026 ROCK1Q13464 1354 aa22.15■■□□□ 1.14
CCNA2-201ENST00000274026 WASHC2CQ9Y4E1 1318 aa22.14■■□□□ 1.14
CCNA2-201ENST00000274026 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.13
CCNA2-201ENST00000274026 BACH2Q9BYV9 841 aa22.14■■□□□ 1.13
CCNA2-201ENST00000274026 MS4A1P11836 297 aa22.13■■□□□ 1.13
CCNA2-201ENST00000274026 EXOC6Q8TAG9 804 aa22.13■■□□□ 1.13
CCNA2-201ENST00000274026 USP47Q96K76 1375 aa22.13■■□□□ 1.13
CCNA2-201ENST00000274026 LRPPRCP42704 1394 aaKnown RBP22.11■■□□□ 1.13
CCNA2-201ENST00000274026 EPRSP07814 1512 aaKnown RBP22.09■■□□□ 1.13
CCNA2-201ENST00000274026 DAPK1P53355 1430 aa22.09■■□□□ 1.13
CCNA2-201ENST00000274026 ROCK2O75116 1388 aaKnown RBP22.09■■□□□ 1.13
CCNA2-201ENST00000274026 MBD5Q9P267 1494 aa22.09■■□□□ 1.13
CCNA2-201ENST00000274026 NESP48681 1621 aa22.07■■□□□ 1.12
CCNA2-201ENST00000274026 RCAN3Q9UKA8 241 aa22.07■■□□□ 1.12
CCNA2-201ENST00000274026 KDM5CP41229 1560 aa22.05■■□□□ 1.12
CCNA2-201ENST00000274026 BRD4O60885 1362 aaPredicted RBP22.05■■□□□ 1.12
CCNA2-201ENST00000274026 KIF15Q9NS87 1388 aa22.04■■□□□ 1.12
CCNA2-201ENST00000274026 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
CCNA2-201ENST00000274026 ABCC5O15440 1437 aa22.03■■□□□ 1.12
CCNA2-201ENST00000274026 DNMT1P26358 1616 aaKnown RBP22.03■■□□□ 1.12
CCNA2-201ENST00000274026 TDRD9Q8NDG6 1382 aaKnown RBP22.03■■□□□ 1.12
CCNA2-201ENST00000274026 KIF14Q15058 1648 aa22.03■■□□□ 1.12
CCNA2-201ENST00000274026 CDK13Q14004 1512 aaKnown RBP22.02■■□□□ 1.12
CCNA2-201ENST00000274026 GAPVD1Q14C86 1478 aa22.02■■□□□ 1.12
CCNA2-201ENST00000274026 ZNF326Q5BKZ1 582 aaKnown RBP22.01■■□□□ 1.11
CCNA2-201ENST00000274026 DDRGK1Q96HY6 314 aa22.01■■□□□ 1.11
CCNA2-201ENST00000274026 MYBBP1AQ9BQG0 1328 aaKnown RBP22.01■■□□□ 1.11
CCNA2-201ENST00000274026 KTN1Q86UP2 1357 aaKnown RBP22.01■■□□□ 1.11
CCNA2-201ENST00000274026 PZPP20742 1482 aa22■■□□□ 1.11
CCNA2-201ENST00000274026 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
CCNA2-201ENST00000274026 RALBP1Q15311 655 aa21.99■■□□□ 1.11
CCNA2-201ENST00000274026 PDE3BQ13370 1112 aa21.98■■□□□ 1.11
CCNA2-201ENST00000274026 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.98■■□□□ 1.11
CCNA2-201ENST00000274026 GSE1Q14687 1217 aa21.97■■□□□ 1.11
CCNA2-201ENST00000274026 KIAA1107Q9UPP5 1409 aa21.95■■□□□ 1.1
CCNA2-201ENST00000274026 WDR62O43379 1518 aa21.94■■□□□ 1.1
CCNA2-201ENST00000274026 BRPF3Q9ULD4 1205 aa21.93■■□□□ 1.1
CCNA2-201ENST00000274026 ZNF644Q9H582 1327 aaPredicted RBP21.92■■□□□ 1.1
CCNA2-201ENST00000274026 URB2Q14146 1524 aaKnown RBP21.92■■□□□ 1.1
CCNA2-201ENST00000274026 RALGAPBQ86X10 1494 aa21.92■■□□□ 1.1
CCNA2-201ENST00000274026 UHRF1BP1Q6BDS2 1440 aa21.92■■□□□ 1.1
CCNA2-201ENST00000274026 ARID3CA6NKF2 412 aa21.91■■□□□ 1.1
CCNA2-201ENST00000274026 NFKBIBQ15653 356 aa21.9■■□□□ 1.1
CCNA2-201ENST00000274026 CARD11Q9BXL7 1154 aa21.9■■□□□ 1.1
CCNA2-201ENST00000274026 NLRP13Q86W25 1043 aa21.87■■□□□ 1.09
CCNA2-201ENST00000274026 IQGAP2Q13576 1575 aa21.87■■□□□ 1.09
CCNA2-201ENST00000274026 PKD2Q13563 968 aa21.87■■□□□ 1.09
CCNA2-201ENST00000274026 E9PCH4 1651 aa21.86■■□□□ 1.09
CCNA2-201ENST00000274026 CDCA7LQ96GN5 454 aa21.85■■□□□ 1.09
CCNA2-201ENST00000274026 ST20-MTHFSA0A0A6YYL1 179 aa21.84■■□□□ 1.09
CCNA2-201ENST00000274026 PLIN1O60240 522 aa21.84■■□□□ 1.09
CCNA2-201ENST00000274026 CRBNQ96SW2 442 aa21.84■■□□□ 1.09
CCNA2-201ENST00000274026 SKAP1Q86WV1 359 aa21.83■■□□□ 1.09
CCNA2-201ENST00000274026 FRAT1Q92837 279 aaPredicted RBP21.83■■□□□ 1.09
CCNA2-201ENST00000274026 DAXXQ9UER7 740 aaPredicted RBP21.82■■□□□ 1.08
CCNA2-201ENST00000274026 UBE2Q2Q8WVN8 375 aa21.82■■□□□ 1.08
CCNA2-201ENST00000274026 PARD3Q8TEW0 1356 aa21.81■■□□□ 1.08
CCNA2-201ENST00000274026 ADGBQ8N7X0 1667 aa21.81■■□□□ 1.08
CCNA2-201ENST00000274026 ARHGEF12Q9NZN5 1544 aa21.8■■□□□ 1.08
CCNA2-201ENST00000274026 SLC4A3P48751 1232 aa21.79■■□□□ 1.08
CCNA2-201ENST00000274026 ADGRL2O95490 1459 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms