RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 KDM5BQ9UGL1 1544 aa26.94■■□□□ 1.9
CPNE7-201ENST00000268720 CNGB1Q14028 1251 aaPredicted RBP26.93■■□□□ 1.9
CPNE7-201ENST00000268720 JPH4Q96JJ6 628 aa26.93■■□□□ 1.9
CPNE7-201ENST00000268720 CDK11AQ9UQ88 783 aaPredicted RBP26.93■■□□□ 1.9
CPNE7-201ENST00000268720 DAPK1P53355 1430 aa26.92■■□□□ 1.9
CPNE7-201ENST00000268720 MYT1Q01538 1121 aa26.92■■□□□ 1.9
CPNE7-201ENST00000268720 MPHOSPH9Q99550 1183 aa26.92■■□□□ 1.9
CPNE7-201ENST00000268720 ABCC5O15440 1437 aa26.91■■□□□ 1.9
CPNE7-201ENST00000268720 NUP160Q12769 1436 aa26.87■■□□□ 1.89
CPNE7-201ENST00000268720 TSHZ2Q9NRE2 1034 aa26.86■■□□□ 1.89
CPNE7-201ENST00000268720 TROQ12816 1431 aaPredicted RBP26.85■■□□□ 1.89
CPNE7-201ENST00000268720 ANP32CO43423 234 aa26.84■■□□□ 1.89
CPNE7-201ENST00000268720 DNMT1P26358 1616 aaKnown RBP26.84■■□□□ 1.89
CPNE7-201ENST00000268720 CFDP1Q9UEE9 299 aaPredicted RBP26.82■■□□□ 1.88
CPNE7-201ENST00000268720 ROCK1Q13464 1354 aa26.81■■□□□ 1.88
CPNE7-201ENST00000268720 CARMIL2Q6F5E8 1435 aa26.81■■□□□ 1.88
CPNE7-201ENST00000268720 IRX6P78412 446 aaPredicted RBP26.81■■□□□ 1.88
CPNE7-201ENST00000268720 ZNF777Q9ULD5 760 aaPredicted RBP26.81■■□□□ 1.88
CPNE7-201ENST00000268720 KIF14Q15058 1648 aa26.8■■□□□ 1.88
CPNE7-201ENST00000268720 GPATCH8Q9UKJ3 1502 aaKnown RBP26.77■■□□□ 1.88
CPNE7-201ENST00000268720 L3MBTL2Q969R5 705 aa26.77■■□□□ 1.88
CPNE7-201ENST00000268720 CAMSAP2Q08AD1 1489 aa26.76■■□□□ 1.87
CPNE7-201ENST00000268720 SENP3-EIF4A1A0A087X0R7 540 aa26.75■■□□□ 1.87
CPNE7-201ENST00000268720 SLC4A1APQ9BWU0 796 aaKnown RBP26.73■■□□□ 1.87
CPNE7-201ENST00000268720 ANKRD30BQ9BXX2 1392 aa26.71■■□□□ 1.87
CPNE7-201ENST00000268720 HSPA5P11021 654 aaKnown RBP26.71■■□□□ 1.87
CPNE7-201ENST00000268720 NCOA1Q15788 1441 aa26.68■■□□□ 1.86
CPNE7-201ENST00000268720 PLEKHD1A6NEE1 506 aa26.67■■□□□ 1.86
CPNE7-201ENST00000268720 CCDC184Q52MB2 194 aa26.67■■□□□ 1.86
CPNE7-201ENST00000268720 ATP10BO94823 1461 aa26.67■■□□□ 1.86
CPNE7-201ENST00000268720 ABCA8O94911 1581 aa26.65■■□□□ 1.86
CPNE7-201ENST00000268720 ADCY10Q96PN6 1610 aa26.65■■□□□ 1.86
CPNE7-201ENST00000268720 ITSN2Q9NZM3 1697 aa26.65■■□□□ 1.86
CPNE7-201ENST00000268720 WASHC2AQ641Q2 1341 aa26.65■■□□□ 1.86
CPNE7-201ENST00000268720 HNRNPUQ00839 825 aaKnown RBP eCLIP26.64■■□□□ 1.86
CPNE7-201ENST00000268720 RPRD2Q5VT52 1461 aaKnown RBP26.64■■□□□ 1.85
CPNE7-201ENST00000268720 CCER2I3L3R5 266 aa26.63■■□□□ 1.85
CPNE7-201ENST00000268720 NBPF8Q3BBV2 869 aa26.63■■□□□ 1.85
CPNE7-201ENST00000268720 C11orf95C9JLR9 678 aaPredicted RBP26.62■■□□□ 1.85
CPNE7-201ENST00000268720 EIF4G2P78344 907 aaKnown RBP eCLIP26.61■■□□□ 1.855e-6■■□□□ 11.4
CPNE7-201ENST00000268720 POLR3GLQ9BT43 218 aa26.61■■□□□ 1.85
CPNE7-201ENST00000268720 PZPP20742 1482 aa26.6■■□□□ 1.85
CPNE7-201ENST00000268720 ZNF326Q5BKZ1 582 aaKnown RBP26.59■■□□□ 1.85
CPNE7-201ENST00000268720 TEX14Q8IWB6 1497 aa26.58■■□□□ 1.85
CPNE7-201ENST00000268720 ABCC10Q5T3U5 1492 aa26.57■■□□□ 1.84
CPNE7-201ENST00000268720 NEFLP07196 543 aa26.56■■□□□ 1.84
CPNE7-201ENST00000268720 CDC42BPAQ5VT25 1732 aa26.56■■□□□ 1.84
CPNE7-201ENST00000268720 ADGRL2O95490 1459 aa26.55■■□□□ 1.84
CPNE7-201ENST00000268720 PTPRGP23470 1445 aa26.54■■□□□ 1.84
CPNE7-201ENST00000268720 ADGBQ8N7X0 1667 aa26.53■■□□□ 1.84
CPNE7-201ENST00000268720 CROCC2H7BZ55 1655 aa26.53■■□□□ 1.84
CPNE7-201ENST00000268720 ANKRD30AQ9BXX3 1397 aa26.53■■□□□ 1.84
CPNE7-201ENST00000268720 FAM9BQ8IZU0 186 aa26.52■■□□□ 1.84
CPNE7-201ENST00000268720 PKD2Q13563 968 aa26.5■■□□□ 1.83
CPNE7-201ENST00000268720 ANKRD50Q9ULJ7 1429 aa26.5■■□□□ 1.83
CPNE7-201ENST00000268720 HNRNPMP52272 730 aaKnown RBP eCLIP26.49■■□□□ 1.836e-12■■□□□ 12.6
CPNE7-201ENST00000268720 C9orf84Q5VXU9 1444 aa26.46■■□□□ 1.83
CPNE7-201ENST00000268720 KIAA1107Q9UPP5 1409 aa26.45■■□□□ 1.82
CPNE7-201ENST00000268720 CHD1O14646 1710 aa26.43■■□□□ 1.82
CPNE7-201ENST00000268720 TSPY4P0CV99 314 aa26.42■■□□□ 1.82
CPNE7-201ENST00000268720 TSPY10P0CW01 314 aa26.42■■□□□ 1.82
CPNE7-201ENST00000268720 CCDC7Q96M83 1385 aa26.41■■□□□ 1.82
CPNE7-201ENST00000268720 NUP155O75694 1391 aa26.41■■□□□ 1.82
CPNE7-201ENST00000268720 SPATA31E1Q6ZUB1 1445 aa26.39■■□□□ 1.82
CPNE7-201ENST00000268720 CNTLNQ9NXG0 1405 aa26.38■■□□□ 1.81
CPNE7-201ENST00000268720 SHANK2Q9UPX8 1470 aa26.38■■□□□ 1.81
CPNE7-201ENST00000268720 MBD5Q9P267 1494 aa26.37■■□□□ 1.81
CPNE7-201ENST00000268720 ANP32EQ9BTT0 268 aa26.36■■□□□ 1.81
CPNE7-201ENST00000268720 ERCC6L2Q5T890 1561 aa26.35■■□□□ 1.81
CPNE7-201ENST00000268720 KIF15Q9NS87 1388 aa26.35■■□□□ 1.81
CPNE7-201ENST00000268720 KIF7Q2M1P5 1343 aa26.34■■□□□ 1.81
CPNE7-201ENST00000268720 RBM19Q9Y4C8 960 aaKnown RBP26.32■■□□□ 1.8
CPNE7-201ENST00000268720 MRS2Q9HD23 443 aa26.32■■□□□ 1.8
CPNE7-201ENST00000268720 SAMD9LQ8IVG5 1584 aa26.32■■□□□ 1.8
CPNE7-201ENST00000268720 CDC42BPBQ9Y5S2 1711 aa26.32■■□□□ 1.8
CPNE7-201ENST00000268720 PRKRIP1Q9H875 184 aaPredicted RBP26.28■■□□□ 1.8
CPNE7-201ENST00000268720 ARHGEF5Q12774 1597 aa26.28■■□□□ 1.8
CPNE7-201ENST00000268720 SHROOM2Q13796 1616 aa26.27■■□□□ 1.8
CPNE7-201ENST00000268720 PREX2Q70Z35 1606 aa26.26■■□□□ 1.79
CPNE7-201ENST00000268720 CCDC141Q6ZP82 1450 aa26.26■■□□□ 1.79
CPNE7-201ENST00000268720 TTC37Q6PGP7 1564 aa26.25■■□□□ 1.79
CPNE7-201ENST00000268720 KDM2AQ9Y2K7 1162 aa26.24■■□□□ 1.79
CPNE7-201ENST00000268720 USP47Q96K76 1375 aa26.24■■□□□ 1.79
CPNE7-201ENST00000268720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.22■■□□□ 1.799e-7■■■□□ 15.6
CPNE7-201ENST00000268720 SYCP2Q9BX26 1530 aa26.22■■□□□ 1.79
CPNE7-201ENST00000268720 KDM5DQ9BY66 1539 aa26.21■■□□□ 1.79
CPNE7-201ENST00000268720 ARHGAP5Q13017 1502 aa26.2■■□□□ 1.78
CPNE7-201ENST00000268720 ABCC2Q92887 1545 aa26.18■■□□□ 1.78
CPNE7-201ENST00000268720 BCORL1Q5H9F3 1711 aa26.18■■□□□ 1.78
CPNE7-201ENST00000268720 RSPH4AQ5TD94 716 aa26.16■■□□□ 1.78
CPNE7-201ENST00000268720 B4GALNT3Q6L9W6 998 aa26.16■■□□□ 1.78
CPNE7-201ENST00000268720 DCAF11Q8TEB1 546 aa26.15■■□□□ 1.78
CPNE7-201ENST00000268720 POLR1AO95602 1720 aaPredicted RBP26.15■■□□□ 1.78
CPNE7-201ENST00000268720 FAM135AQ9P2D6 1515 aa26.14■■□□□ 1.78
CPNE7-201ENST00000268720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.14■■□□□ 1.778e-9■□□□□ 9.1
CPNE7-201ENST00000268720 UHRF1BP1Q6BDS2 1440 aa26.13■■□□□ 1.77
CPNE7-201ENST00000268720 KDM5CP41229 1560 aa26.13■■□□□ 1.77
CPNE7-201ENST00000268720 CARD11Q9BXL7 1154 aa26.12■■□□□ 1.77
CPNE7-201ENST00000268720 RALGAPBQ86X10 1494 aa26.09■■□□□ 1.77
CPNE7-201ENST00000268720 ARHGEF12Q9NZN5 1544 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms