RNA–Protein interactions for RNA: ENST00000265362.8

SEMA3A-201, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA3A, Length 8,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-201ENST00000265362 CCDC136Q96JN2 1154 aa7.85□□□□□ -1.15
SEMA3A-201ENST00000265362 ARID4BQ4LE39 1312 aaPredicted RBP7.85□□□□□ -1.15
SEMA3A-201ENST00000265362 NUP155O75694 1391 aa7.85□□□□□ -1.15
SEMA3A-201ENST00000265362 NCOA2Q15596 1464 aa7.84□□□□□ -1.15
SEMA3A-201ENST00000265362 STAC3Q96MF2 364 aa7.84□□□□□ -1.15
SEMA3A-201ENST00000265362 UPF2Q9HAU5 1272 aaKnown RBP7.84□□□□□ -1.15
SEMA3A-201ENST00000265362 ITSN2Q9NZM3 1697 aa7.84□□□□□ -1.15
SEMA3A-201ENST00000265362 TMF1P82094 1093 aa7.84□□□□□ -1.15
SEMA3A-201ENST00000265362 WDR97A6NE52 1622 aa7.84□□□□□ -1.16
SEMA3A-201ENST00000265362 CFAP43Q8NDM7 1665 aa7.83□□□□□ -1.16
SEMA3A-201ENST00000265362 PTPRGP23470 1445 aa7.83□□□□□ -1.16
SEMA3A-201ENST00000265362 MAGI1Q96QZ7 1491 aaPredicted RBP7.83□□□□□ -1.16
SEMA3A-201ENST00000265362 EIF3AQ14152 1382 aaKnown RBP7.83□□□□□ -1.16
SEMA3A-201ENST00000265362 PCF11O94913 1555 aaKnown RBP7.83□□□□□ -1.16
SEMA3A-201ENST00000265362 NESP48681 1621 aa7.83□□□□□ -1.16
SEMA3A-201ENST00000265362 CFAP53Q96M91 514 aa7.83□□□□□ -1.16
SEMA3A-201ENST00000265362 SYNJ2O15056 1496 aa7.82□□□□□ -1.16
SEMA3A-201ENST00000265362 EIF5BO60841 1220 aaKnown RBP7.82□□□□□ -1.16
SEMA3A-201ENST00000265362 PKD2Q13563 968 aa7.82□□□□□ -1.16
SEMA3A-201ENST00000265362 KIAA0586Q9BVV6 1533 aa7.81□□□□□ -1.16
SEMA3A-201ENST00000265362 DCAF11Q8TEB1 546 aa7.81□□□□□ -1.16
SEMA3A-201ENST00000265362 RALBP1Q15311 655 aa7.81□□□□□ -1.16
SEMA3A-201ENST00000265362 PLEKHH2Q8IVE3 1493 aa7.81□□□□□ -1.16
SEMA3A-201ENST00000265362 HFM1A2PYH4 1435 aa7.81□□□□□ -1.16
SEMA3A-201ENST00000265362 HDGFP51858 240 aaKnown RBP7.81□□□□□ -1.16
SEMA3A-201ENST00000265362 RGL3Q3MIN7 710 aa7.81□□□□□ -1.16
SEMA3A-201ENST00000265362 PNNQ9H307 717 aaKnown RBP7.81□□□□□ -1.16
SEMA3A-201ENST00000265362 PTPN23Q9H3S7 1636 aa7.8□□□□□ -1.16
SEMA3A-201ENST00000265362 PHLDB1Q86UU1 1377 aa7.8□□□□□ -1.16
SEMA3A-201ENST00000265362 HIRIP3Q9BW71 556 aaPredicted RBP7.8□□□□□ -1.16
SEMA3A-201ENST00000265362 PBRM1Q86U86 1689 aa7.8□□□□□ -1.16
SEMA3A-201ENST00000265362 CCDC144AA2RUR9 1427 aa7.79□□□□□ -1.16
SEMA3A-201ENST00000265362 KTN1Q86UP2 1357 aaKnown RBP7.78□□□□□ -1.16
SEMA3A-201ENST00000265362 EPRSP07814 1512 aaKnown RBP7.77□□□□□ -1.16
SEMA3A-201ENST00000265362 SPAG9O60271 1321 aaKnown RBP7.77□□□□□ -1.16
SEMA3A-201ENST00000265362 CHMP4BQ9H444 224 aaKnown RBP7.77□□□□□ -1.17
SEMA3A-201ENST00000265362 TROQ12816 1431 aaPredicted RBP7.77□□□□□ -1.17
SEMA3A-201ENST00000265362 KIF14Q15058 1648 aa7.77□□□□□ -1.17
SEMA3A-201ENST00000265362 HSPA5P11021 654 aaKnown RBP7.77□□□□□ -1.17
SEMA3A-201ENST00000265362 MS4A1P11836 297 aa7.77□□□□□ -1.17
SEMA3A-201ENST00000265362 PPP4R2Q9NY27 417 aa7.77□□□□□ -1.17
SEMA3A-201ENST00000265362 ROCK1Q13464 1354 aa7.76□□□□□ -1.17
SEMA3A-201ENST00000265362 L3MBTL2Q969R5 705 aa7.76□□□□□ -1.17
SEMA3A-201ENST00000265362 NUDCQ9Y266 331 aa7.76□□□□□ -1.17
SEMA3A-201ENST00000265362 URB2Q14146 1524 aaKnown RBP7.75□□□□□ -1.17
SEMA3A-201ENST00000265362 SNAPC4Q5SXM2 1469 aa7.74□□□□□ -1.17
SEMA3A-201ENST00000265362 AKNAQ7Z591 1439 aa7.74□□□□□ -1.17
SEMA3A-201ENST00000265362 ANKRD50Q9ULJ7 1429 aa7.74□□□□□ -1.17
SEMA3A-201ENST00000265362 KIF15Q9NS87 1388 aa7.74□□□□□ -1.17
SEMA3A-201ENST00000265362 DDRGK1Q96HY6 314 aa7.73□□□□□ -1.17
SEMA3A-201ENST00000265362 HAP1P54257 671 aaPredicted RBP7.73□□□□□ -1.17
SEMA3A-201ENST00000265362 SUPT16HQ9Y5B9 1047 aaKnown RBP7.73□□□□□ -1.17
SEMA3A-201ENST00000265362 PDE3BQ13370 1112 aa7.73□□□□□ -1.17
SEMA3A-201ENST00000265362 NGEFQ8N5V2 710 aa7.73□□□□□ -1.17
SEMA3A-201ENST00000265362 GRIN2AQ12879 1464 aa7.73□□□□□ -1.17
SEMA3A-201ENST00000265362 ARHGAP5Q13017 1502 aa7.73□□□□□ -1.17
SEMA3A-201ENST00000265362 RAPGEF6Q8TEU7 1601 aa7.72□□□□□ -1.17
SEMA3A-201ENST00000265362 NLRP13Q86W25 1043 aa7.72□□□□□ -1.17
SEMA3A-201ENST00000265362 MYH16Q9H6N6 1097 aa7.72□□□□□ -1.17
SEMA3A-201ENST00000265362 HNRNPMP52272 730 aaKnown RBP eCLIP7.72□□□□□ -1.17
SEMA3A-201ENST00000265362 USP47Q96K76 1375 aa7.71□□□□□ -1.17
SEMA3A-201ENST00000265362 POGKQ9P215 609 aa7.7□□□□□ -1.18
SEMA3A-201ENST00000265362 ABCA5Q8WWZ7 1642 aa7.7□□□□□ -1.18
SEMA3A-201ENST00000265362 ANP32EQ9BTT0 268 aa7.7□□□□□ -1.18
SEMA3A-201ENST00000265362 C9orf84Q5VXU9 1444 aa7.7□□□□□ -1.18
SEMA3A-201ENST00000265362 BECN1Q14457 450 aa7.69□□□□□ -1.18
SEMA3A-201ENST00000265362 SALL2Q9Y467 1007 aaPredicted RBP7.69□□□□□ -1.18
SEMA3A-201ENST00000265362 UGGT2Q9NYU1 1516 aa7.69□□□□□ -1.18
SEMA3A-201ENST00000265362 DAPK1P53355 1430 aa7.69□□□□□ -1.18
SEMA3A-201ENST00000265362 NAIPQ13075 1403 aa7.69□□□□□ -1.18
SEMA3A-201ENST00000265362 PRG4Q92954 1404 aaPredicted RBP7.69□□□□□ -1.18
SEMA3A-201ENST00000265362 KIAA1107Q9UPP5 1409 aa7.69□□□□□ -1.18
SEMA3A-201ENST00000265362 MAPK8IP3Q9UPT6 1336 aa7.69□□□□□ -1.18
SEMA3A-201ENST00000265362 FOXD1Q16676 465 aa7.69□□□□□ -1.18
SEMA3A-201ENST00000265362 WASHC2AQ641Q2 1341 aa7.69□□□□□ -1.18
SEMA3A-201ENST00000265362 WASHC2CQ9Y4E1 1318 aa7.69□□□□□ -1.18
SEMA3A-201ENST00000265362 ADAMTS12P58397 1594 aa7.68□□□□□ -1.18
SEMA3A-201ENST00000265362 ZBED9Q6R2W3 1325 aa7.68□□□□□ -1.18
SEMA3A-201ENST00000265362 CFAP65Q6ZU64 1925 aaKnown RBP7.68□□□□□ -1.18
SEMA3A-201ENST00000265362 HSP90AA1P07900 732 aaKnown RBP7.68□□□□□ -1.18
SEMA3A-201ENST00000265362 OSCARQ8IYS5 282 aa7.68□□□□□ -1.18
SEMA3A-201ENST00000265362 CALD1Q05682 793 aaKnown RBP7.68□□□□□ -1.18
SEMA3A-201ENST00000265362 KIF3BO15066 747 aa7.68□□□□□ -1.18
SEMA3A-201ENST00000265362 CFAP44Q96MT7 982 aa7.68□□□□□ -1.18
SEMA3A-201ENST00000265362 ADGBQ8N7X0 1667 aa7.67□□□□□ -1.18
SEMA3A-201ENST00000265362 SCAPERQ9BY12 1400 aa7.67□□□□□ -1.18
SEMA3A-201ENST00000265362 MYBBP1AQ9BQG0 1328 aaKnown RBP7.67□□□□□ -1.18
SEMA3A-201ENST00000265362 CHMP4AQ9BY43 222 aa7.67□□□□□ -1.18
SEMA3A-201ENST00000265362 SAMD9Q5K651 1589 aa7.66□□□□□ -1.18
SEMA3A-201ENST00000265362 FTSJ3Q8IY81 847 aaKnown RBP7.66□□□□□ -1.18
SEMA3A-201ENST00000265362 ANP32BQ92688 251 aaKnown RBP7.66□□□□□ -1.18
SEMA3A-201ENST00000265362 CCDC141Q6ZP82 1450 aa7.66□□□□□ -1.18
SEMA3A-201ENST00000265362 PRKRIP1Q9H875 184 aaPredicted RBP7.66□□□□□ -1.18
SEMA3A-201ENST00000265362 CNTLNQ9NXG0 1405 aa7.65□□□□□ -1.18
SEMA3A-201ENST00000265362 CDK13Q14004 1512 aaKnown RBP7.65□□□□□ -1.18
SEMA3A-201ENST00000265362 TERF2IPQ9NYB0 399 aa7.65□□□□□ -1.18
SEMA3A-201ENST00000265362 CAMSAP2Q08AD1 1489 aa7.65□□□□□ -1.18
SEMA3A-201ENST00000265362 GCC2Q8IWJ2 1684 aa7.65□□□□□ -1.18
SEMA3A-201ENST00000265362 VGFO15240 615 aaPredicted RBP7.65□□□□□ -1.19
SEMA3A-201ENST00000265362 KAT6BQ8WYB5 2073 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms