RNA–Protein interactions for RNA: ENST00000265140.9

SLF1-201, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLF1, Length 5,905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-201ENST00000265140 ATAD2BQ9ULI0 1458 aa8.66□□□□□ -1.02
SLF1-201ENST00000265140 PPM1GO15355 546 aaPredicted RBP8.66□□□□□ -1.02
SLF1-201ENST00000265140 CADPSQ9ULU8 1353 aa8.66□□□□□ -1.02
SLF1-201ENST00000265140 SETQ01105 290 aaPredicted RBP8.65□□□□□ -1.02
SLF1-201ENST00000265140 NEUROD2Q15784 382 aa8.65□□□□□ -1.02
SLF1-201ENST00000265140 GOLGA6L1Q8N7Z2 621 aa8.65□□□□□ -1.02
SLF1-201ENST00000265140 NOP58Q9Y2X3 529 aaKnown RBP8.65□□□□□ -1.02
SLF1-201ENST00000265140 FGD1P98174 961 aa8.65□□□□□ -1.02
SLF1-201ENST00000265140 NPHP1O15259 732 aa8.65□□□□□ -1.03
SLF1-201ENST00000265140 GOLGA6L4A6NEF3 574 aa8.64□□□□□ -1.03
SLF1-201ENST00000265140 RGS3P49796 1198 aa8.64□□□□□ -1.03
SLF1-201ENST00000265140 CC2D1BQ5T0F9 858 aaKnown RBP8.64□□□□□ -1.03
SLF1-201ENST00000265140 KRI1Q8N9T8 703 aaKnown RBP8.64□□□□□ -1.03
SLF1-201ENST00000265140 CFAP53Q96M91 514 aa8.64□□□□□ -1.03
SLF1-201ENST00000265140 TMF1P82094 1093 aa8.63□□□□□ -1.03
SLF1-201ENST00000265140 NAP1L2Q9ULW6 460 aaPredicted RBP8.63□□□□□ -1.03
SLF1-201ENST00000265140 BICRAQ9NZM4 1560 aa8.63□□□□□ -1.03
SLF1-201ENST00000265140 USP35Q9P2H5 1018 aa8.62□□□□□ -1.03
SLF1-201ENST00000265140 FHOD3Q2V2M9 1422 aa8.62□□□□□ -1.03
SLF1-201ENST00000265140 PEG3Q9GZU2 1588 aa8.62□□□□□ -1.03
SLF1-201ENST00000265140 EIF4G1Q04637 1599 aaKnown RBP8.61□□□□□ -1.03
SLF1-201ENST00000265140 C14orf37Q86TY3 774 aa8.61□□□□□ -1.03
SLF1-201ENST00000265140 PRKRIP1Q9H875 184 aaPredicted RBP8.61□□□□□ -1.03
SLF1-201ENST00000265140 LAS1LQ9Y4W2 734 aaKnown RBP8.61□□□□□ -1.03
SLF1-201ENST00000265140 NUP155O75694 1391 aa8.61□□□□□ -1.03
SLF1-201ENST00000265140 HSP90AB1P08238 724 aaKnown RBP8.6□□□□□ -1.03
SLF1-201ENST00000265140 GOLGA2Q08379 1002 aa8.6□□□□□ -1.03
SLF1-201ENST00000265140 IGF1RP08069 1367 aa8.6□□□□□ -1.03
SLF1-201ENST00000265140 PDE4CQ08493 712 aa8.6□□□□□ -1.03
SLF1-201ENST00000265140 FRAT1Q92837 279 aaPredicted RBP8.59□□□□□ -1.03
SLF1-201ENST00000265140 SENP3Q9H4L4 574 aaPredicted RBP8.59□□□□□ -1.03
SLF1-201ENST00000265140 HAP1P54257 671 aaPredicted RBP8.59□□□□□ -1.03
SLF1-201ENST00000265140 RCAN3Q9UKA8 241 aa8.59□□□□□ -1.03
SLF1-201ENST00000265140 PLEKHG5O94827 1062 aa8.59□□□□□ -1.03
SLF1-201ENST00000265140 RALBP1Q15311 655 aa8.59□□□□□ -1.03
SLF1-201ENST00000265140 ISY1Q9ULR0 285 aaKnown RBP8.59□□□□□ -1.03
SLF1-201ENST00000265140 NLRP13Q86W25 1043 aa8.58□□□□□ -1.04
SLF1-201ENST00000265140 ARID4BQ4LE39 1312 aaPredicted RBP8.58□□□□□ -1.04
SLF1-201ENST00000265140 KCNJ4P48050 445 aa8.58□□□□□ -1.04
SLF1-201ENST00000265140 NUDCQ9Y266 331 aa8.58□□□□□ -1.04
SLF1-201ENST00000265140 FTSJ3Q8IY81 847 aaKnown RBP8.57□□□□□ -1.04
SLF1-201ENST00000265140 PDS5BQ9NTI5 1447 aa8.57□□□□□ -1.04
SLF1-201ENST00000265140 GNL2Q13823 731 aaKnown RBP8.56□□□□□ -1.04
SLF1-201ENST00000265140 ANKRD30AQ9BXX3 1397 aa8.56□□□□□ -1.04
SLF1-201ENST00000265140 FBXO3Q9UK99 471 aa8.56□□□□□ -1.04
SLF1-201ENST00000265140 ST20-MTHFSA0A0A6YYL1 179 aa8.56□□□□□ -1.04
SLF1-201ENST00000265140 TCERG1O14776 1098 aaKnown RBP8.56□□□□□ -1.04
SLF1-201ENST00000265140 OS9Q13438 667 aaPredicted RBP8.56□□□□□ -1.04
SLF1-201ENST00000265140 ARID3AQ99856 593 aa8.55□□□□□ -1.04
SLF1-201ENST00000265140 KTN1Q86UP2 1357 aaKnown RBP8.55□□□□□ -1.04
SLF1-201ENST00000265140 CEP89Q96ST8 783 aa8.55□□□□□ -1.04
SLF1-201ENST00000265140 PATL2C9JE40 543 aaKnown RBP8.55□□□□□ -1.04
SLF1-201ENST00000265140 DEKP35659 375 aaKnown RBP8.55□□□□□ -1.04
SLF1-201ENST00000265140 PDE3BQ13370 1112 aa8.55□□□□□ -1.04
SLF1-201ENST00000265140 MAPK8IP3Q9UPT6 1336 aa8.54□□□□□ -1.04
SLF1-201ENST00000265140 RSPH4AQ5TD94 716 aa8.54□□□□□ -1.04
SLF1-201ENST00000265140 EFCAB2Q5VUJ9 269 aa8.53□□□□□ -1.04
SLF1-201ENST00000265140 JPH4Q96JJ6 628 aa8.53□□□□□ -1.04
SLF1-201ENST00000265140 U2SURPO15042 1029 aaKnown RBP8.53□□□□□ -1.04
SLF1-201ENST00000265140 MS4A1P11836 297 aa8.53□□□□□ -1.04
SLF1-201ENST00000265140 HMGXB3Q12766 1538 aa8.53□□□□□ -1.04
SLF1-201ENST00000265140 TPM4P67936 248 aa8.53□□□□□ -1.04
SLF1-201ENST00000265140 RRP12Q5JTH9 1297 aaKnown RBP8.53□□□□□ -1.04
SLF1-201ENST00000265140 CARMIL2Q6F5E8 1435 aa8.53□□□□□ -1.04
SLF1-201ENST00000265140 PHLDB1Q86UU1 1377 aa8.52□□□□□ -1.05
SLF1-201ENST00000265140 POGKQ9P215 609 aa8.52□□□□□ -1.05
SLF1-201ENST00000265140 ZBED9Q6R2W3 1325 aa8.52□□□□□ -1.05
SLF1-201ENST00000265140 ROCK2O75116 1388 aaKnown RBP8.51□□□□□ -1.05
SLF1-201ENST00000265140 MORC1Q86VD1 984 aa8.51□□□□□ -1.05
SLF1-201ENST00000265140 HNRNPMP52272 730 aaKnown RBP eCLIP8.51□□□□□ -1.059e-7■■■■■ 41.8
SLF1-201ENST00000265140 IPO9Q96P70 1041 aaKnown RBP8.51□□□□□ -1.05
SLF1-201ENST00000265140 MCCP23508 829 aa8.5□□□□□ -1.05
SLF1-201ENST00000265140 HSCBQ8IWL3 235 aa8.5□□□□□ -1.05
SLF1-201ENST00000265140 CHMP4BQ9H444 224 aaKnown RBP8.5□□□□□ -1.05
SLF1-201ENST00000265140 KIF21BO75037 1637 aa8.49□□□□□ -1.05
SLF1-201ENST00000265140 GGT6Q6P531 493 aa8.49□□□□□ -1.05
SLF1-201ENST00000265140 NCAPD3P42695 1498 aa8.49□□□□□ -1.05
SLF1-201ENST00000265140 PTMSP20962 102 aa8.48□□□□□ -1.05
SLF1-201ENST00000265140 CCDC18Q5T9S5 1454 aa8.48□□□□□ -1.05
SLF1-201ENST00000265140 ERCC6Q03468 1493 aa8.48□□□□□ -1.05
SLF1-201ENST00000265140 ARAP1Q96P48 1450 aa8.48□□□□□ -1.05
SLF1-201ENST00000265140 U2AF1L5P0DN76 240 aaPredicted RBP8.47□□□□□ -1.05
SLF1-201ENST00000265140 U2AF1Q01081 240 aaKnown RBP eCLIP8.47□□□□□ -1.05
SLF1-201ENST00000265140 HTATSF1O43719 755 aaKnown RBP8.47□□□□□ -1.05
SLF1-201ENST00000265140 TPM3P06753 285 aa8.47□□□□□ -1.05
SLF1-201ENST00000265140 FGD6Q6ZV73 1430 aa8.47□□□□□ -1.05
SLF1-201ENST00000265140 KANK1Q14678 1352 aa8.47□□□□□ -1.05
SLF1-201ENST00000265140 UACAQ9BZF9 1416 aa8.47□□□□□ -1.05
SLF1-201ENST00000265140 SRPK2P78362 688 aaKnown RBP8.47□□□□□ -1.05
SLF1-201ENST00000265140 SAFB2Q14151 953 aaKnown RBP eCLIP8.47□□□□□ -1.05
SLF1-201ENST00000265140 TAF7LQ5H9L4 462 aa8.47□□□□□ -1.05
SLF1-201ENST00000265140 MYBBP1AQ9BQG0 1328 aaKnown RBP8.47□□□□□ -1.05
SLF1-201ENST00000265140 KIF3BO15066 747 aa8.46□□□□□ -1.05
SLF1-201ENST00000265140 FANCIQ9NVI1 1328 aa8.46□□□□□ -1.05
SLF1-201ENST00000265140 SYNJ1O43426 1573 aa8.46□□□□□ -1.06
SLF1-201ENST00000265140 CCDC34Q96HJ3 373 aa8.46□□□□□ -1.06
SLF1-201ENST00000265140 PANK3Q9H999 370 aa8.46□□□□□ -1.06
SLF1-201ENST00000265140 WASHC2AQ641Q2 1341 aa8.46□□□□□ -1.06
SLF1-201ENST00000265140 USP47Q96K76 1375 aa8.46□□□□□ -1.06
SLF1-201ENST00000265140 RRBP1Q9P2E9 1410 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms