RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 FRMPD1Q5SYB0 1578 aa13.29□□□□□ -0.28
ERCC8-201ENST00000265038 EHBP1L1Q8N3D4 1523 aa13.29□□□□□ -0.28
ERCC8-201ENST00000265038 TIAM1Q13009 1591 aa13.29□□□□□ -0.28
ERCC8-201ENST00000265038 CFAP74Q9C0B2 1584 aa13.29□□□□□ -0.28
ERCC8-201ENST00000265038 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
ERCC8-201ENST00000265038 AFAP1Q8N556 730 aa13.28□□□□□ -0.28
ERCC8-201ENST00000265038 CFDP1Q9UEE9 299 aaPredicted RBP13.28□□□□□ -0.28
ERCC8-201ENST00000265038 ZNF777Q9ULD5 760 aaPredicted RBP13.28□□□□□ -0.28
ERCC8-201ENST00000265038 MYO5CQ9NQX4 1742 aa13.28□□□□□ -0.28
ERCC8-201ENST00000265038 MAP3K1Q13233 1512 aa13.28□□□□□ -0.28
ERCC8-201ENST00000265038 LRRC9Q6ZRR7 1453 aa13.27□□□□□ -0.28
ERCC8-201ENST00000265038 POGZQ7Z3K3 1410 aa13.27□□□□□ -0.28
ERCC8-201ENST00000265038 ARHGEF12Q9NZN5 1544 aa13.26□□□□□ -0.29
ERCC8-201ENST00000265038 NCOA2Q15596 1464 aa13.26□□□□□ -0.29
ERCC8-201ENST00000265038 PREX2Q70Z35 1606 aa13.25□□□□□ -0.29
ERCC8-201ENST00000265038 APLP2Q06481 763 aa13.25□□□□□ -0.29
ERCC8-201ENST00000265038 CDC42BPBQ9Y5S2 1711 aa13.24□□□□□ -0.29
ERCC8-201ENST00000265038 TRAPPC8Q9Y2L5 1435 aa13.24□□□□□ -0.29
ERCC8-201ENST00000265038 HNRNPMP52272 730 aaKnown RBP eCLIP13.24□□□□□ -0.29
ERCC8-201ENST00000265038 ZNF644Q9H582 1327 aaPredicted RBP13.24□□□□□ -0.29
ERCC8-201ENST00000265038 YEATS2Q9ULM3 1422 aa13.23□□□□□ -0.29
ERCC8-201ENST00000265038 RICTORQ6R327 1708 aa13.23□□□□□ -0.29
ERCC8-201ENST00000265038 ZMYM4Q5VZL5 1548 aa13.22□□□□□ -0.29
ERCC8-201ENST00000265038 CDC42BPAQ5VT25 1732 aa13.22□□□□□ -0.29
ERCC8-201ENST00000265038 ZNF518AQ6AHZ1 1483 aa13.22□□□□□ -0.29
ERCC8-201ENST00000265038 MAGI2Q86UL8 1455 aa13.22□□□□□ -0.29
ERCC8-201ENST00000265038 ABCC1P33527 1531 aa13.22□□□□□ -0.29
ERCC8-201ENST00000265038 KIAA1107Q9UPP5 1409 aa13.21□□□□□ -0.29
ERCC8-201ENST00000265038 PHF23Q9BUL5 403 aaPredicted RBP13.21□□□□□ -0.29
ERCC8-201ENST00000265038 SAMD9LQ8IVG5 1584 aa13.21□□□□□ -0.3
ERCC8-201ENST00000265038 ZFYVE16Q7Z3T8 1539 aa13.19□□□□□ -0.3
ERCC8-201ENST00000265038 KDM5CP41229 1560 aa13.19□□□□□ -0.3
ERCC8-201ENST00000265038 SUPT6HQ7KZ85 1726 aaKnown RBP13.18□□□□□ -0.3
ERCC8-201ENST00000265038 PLEKHH2Q8IVE3 1493 aa13.18□□□□□ -0.3
ERCC8-201ENST00000265038 ARHGEF40Q8TER5 1519 aa13.18□□□□□ -0.3
ERCC8-201ENST00000265038 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
ERCC8-201ENST00000265038 ARID4BQ4LE39 1312 aaPredicted RBP13.18□□□□□ -0.3
ERCC8-201ENST00000265038 MLH3Q9UHC1 1453 aa13.18□□□□□ -0.3
ERCC8-201ENST00000265038 SYCP2Q9BX26 1530 aa13.18□□□□□ -0.3
ERCC8-201ENST00000265038 ATP10AO60312 1499 aa13.17□□□□□ -0.3
ERCC8-201ENST00000265038 MBD5Q9P267 1494 aa13.17□□□□□ -0.3
ERCC8-201ENST00000265038 SPAG9O60271 1321 aaKnown RBP13.15□□□□□ -0.3
ERCC8-201ENST00000265038 MYOM3Q5VTT5 1437 aa13.15□□□□□ -0.3
ERCC8-201ENST00000265038 ITSN2Q9NZM3 1697 aa13.14□□□□□ -0.31
ERCC8-201ENST00000265038 C9orf84Q5VXU9 1444 aa13.14□□□□□ -0.31
ERCC8-201ENST00000265038 MIA2Q96PC5 1412 aa13.13□□□□□ -0.31
ERCC8-201ENST00000265038 RSPH4AQ5TD94 716 aa13.13□□□□□ -0.31
ERCC8-201ENST00000265038 CAMSAP2Q08AD1 1489 aa13.13□□□□□ -0.31
ERCC8-201ENST00000265038 HECW2Q9P2P5 1572 aa13.12□□□□□ -0.31
ERCC8-201ENST00000265038 MLECQ14165 292 aa13.11□□□□□ -0.31
ERCC8-201ENST00000265038 DIP2CQ9Y2E4 1556 aa13.1□□□□□ -0.31
ERCC8-201ENST00000265038 SIGLEC1Q9BZZ2 1709 aa13.09□□□□□ -0.31
ERCC8-201ENST00000265038 RTEL1-TNFRSF6BF6WH68 1400 aa13.09□□□□□ -0.31
ERCC8-201ENST00000265038 CCDC141Q6ZP82 1450 aa13.08□□□□□ -0.31
ERCC8-201ENST00000265038 PPARGC1BQ86YN6 1023 aaKnown RBP13.08□□□□□ -0.31
ERCC8-201ENST00000265038 ABCA6Q8N139 1617 aa13.08□□□□□ -0.32
ERCC8-201ENST00000265038 KIDINS220Q9ULH0 1771 aa13.08□□□□□ -0.32
ERCC8-201ENST00000265038 TSPY4P0CV99 314 aa13.07□□□□□ -0.32
ERCC8-201ENST00000265038 TSPY10P0CW01 314 aa13.07□□□□□ -0.32
ERCC8-201ENST00000265038 ATP7AQ04656 1500 aa13.07□□□□□ -0.32
ERCC8-201ENST00000265038 FGD6Q6ZV73 1430 aa13.07□□□□□ -0.32
ERCC8-201ENST00000265038 ADAMTSL3P82987 1691 aa13.07□□□□□ -0.32
ERCC8-201ENST00000265038 REREQ9P2R6 1566 aa13.06□□□□□ -0.32
ERCC8-201ENST00000265038 BCORL1Q5H9F3 1711 aa13.06□□□□□ -0.32
ERCC8-201ENST00000265038 INO80Q9ULG1 1556 aaPredicted RBP13.05□□□□□ -0.32
ERCC8-201ENST00000265038 AGLP35573 1532 aa13.05□□□□□ -0.32
ERCC8-201ENST00000265038 ARHGEF5Q12774 1597 aa13.05□□□□□ -0.32
ERCC8-201ENST00000265038 A2MP01023 1474 aa13.05□□□□□ -0.32
ERCC8-201ENST00000265038 PTPRMP28827 1452 aa13.05□□□□□ -0.32
ERCC8-201ENST00000265038 TCOF1Q13428 1488 aaKnown RBP13.04□□□□□ -0.32
ERCC8-201ENST00000265038 DHX29Q7Z478 1369 aaKnown RBP13.03□□□□□ -0.32
ERCC8-201ENST00000265038 ABCC5O15440 1437 aa13.03□□□□□ -0.32
ERCC8-201ENST00000265038 MADDQ8WXG6 1647 aa13.02□□□□□ -0.33
ERCC8-201ENST00000265038 PTPN23Q9H3S7 1636 aa13.02□□□□□ -0.33
ERCC8-201ENST00000265038 FAM50AQ14320 339 aaKnown RBP13.01□□□□□ -0.33
ERCC8-201ENST00000265038 PLXNC1O60486 1568 aa13□□□□□ -0.33
ERCC8-201ENST00000265038 DAPK1P53355 1430 aa13□□□□□ -0.33
ERCC8-201ENST00000265038 PLPPR3Q6T4P5 718 aa13□□□□□ -0.33
ERCC8-201ENST00000265038 CEBPAP49715 358 aaPredicted RBP12.99□□□□□ -0.33
ERCC8-201ENST00000265038 GGT6Q6P531 493 aa12.99□□□□□ -0.33
ERCC8-201ENST00000265038 KIF3BO15066 747 aa12.98□□□□□ -0.33
ERCC8-201ENST00000265038 MAST1Q9Y2H9 1570 aa12.98□□□□□ -0.33
ERCC8-201ENST00000265038 CHIC2Q9UKJ5 165 aa12.98□□□□□ -0.33
ERCC8-201ENST00000265038 RRP7BPQ9NSQ0 103 aa12.97□□□□□ -0.33
ERCC8-201ENST00000265038 RIMS1Q86UR5 1692 aaKnown RBP12.96□□□□□ -0.33
ERCC8-201ENST00000265038 SHANK2Q9UPX8 1470 aa12.96□□□□□ -0.33
ERCC8-201ENST00000265038 ESF1Q9H501 851 aaKnown RBP12.96□□□□□ -0.34
ERCC8-201ENST00000265038 PPP6R1Q9UPN7 881 aa12.96□□□□□ -0.34
ERCC8-201ENST00000265038 ADGBQ8N7X0 1667 aa12.95□□□□□ -0.34
ERCC8-201ENST00000265038 DNMT1P26358 1616 aaKnown RBP12.94□□□□□ -0.34
ERCC8-201ENST00000265038 KIF15Q9NS87 1388 aa12.94□□□□□ -0.34
ERCC8-201ENST00000265038 PTPRKQ15262 1439 aa12.93□□□□□ -0.34
ERCC8-201ENST00000265038 CNTLNQ9NXG0 1405 aa12.93□□□□□ -0.34
ERCC8-201ENST00000265038 ZMYM3Q14202 1370 aa12.93□□□□□ -0.34
ERCC8-201ENST00000265038 NCOA1Q15788 1441 aa12.92□□□□□ -0.34
ERCC8-201ENST00000265038 ANKRD30AQ9BXX3 1397 aa12.92□□□□□ -0.34
ERCC8-201ENST00000265038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.92□□□□□ -0.34
ERCC8-201ENST00000265038 FER1L4A9Z1Z3 1794 aa12.92□□□□□ -0.34
ERCC8-201ENST00000265038 DUOX2Q9NRD8 1548 aa12.91□□□□□ -0.34
ERCC8-201ENST00000265038 RRBP1Q9P2E9 1410 aaKnown RBP12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms