RNA–Protein interactions for RNA: ENST00000263212.9

PPM1F-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PPM1F, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-201ENST00000263212 KANK1Q14678 1352 aa18.87■□□□□ 0.61
PPM1F-201ENST00000263212 PDE3BQ13370 1112 aa18.86■□□□□ 0.61
PPM1F-201ENST00000263212 MORC1Q86VD1 984 aa18.86■□□□□ 0.61
PPM1F-201ENST00000263212 ROCK2O75116 1388 aaKnown RBP18.85■□□□□ 0.61
PPM1F-201ENST00000263212 ANKRD30AQ9BXX3 1397 aa18.84■□□□□ 0.61
PPM1F-201ENST00000263212 CFAP44Q96MT7 982 aa18.84■□□□□ 0.61
PPM1F-201ENST00000263212 NUP155O75694 1391 aa18.83■□□□□ 0.61
PPM1F-201ENST00000263212 C14orf37Q86TY3 774 aa18.83■□□□□ 0.6
PPM1F-201ENST00000263212 ZRSR1Q15695 479 aaKnown RBP18.83■□□□□ 0.6
PPM1F-201ENST00000263212 NLRP13Q86W25 1043 aa18.82■□□□□ 0.6
PPM1F-201ENST00000263212 ARID4BQ4LE39 1312 aaPredicted RBP18.81■□□□□ 0.6
PPM1F-201ENST00000263212 RUSC2Q8N2Y8 1516 aa18.79■□□□□ 0.6
PPM1F-201ENST00000263212 ZBTB7CA1YPR0 619 aa18.79■□□□□ 0.6
PPM1F-201ENST00000263212 FHOD3Q2V2M9 1422 aa18.78■□□□□ 0.6
PPM1F-201ENST00000263212 HAP1P54257 671 aaPredicted RBP18.78■□□□□ 0.6
PPM1F-201ENST00000263212 RWDD1Q9H446 243 aaPredicted RBP18.78■□□□□ 0.6
PPM1F-201ENST00000263212 CARMIL2Q6F5E8 1435 aa18.78■□□□□ 0.6
PPM1F-201ENST00000263212 IPO8O15397 1037 aaKnown RBP18.78■□□□□ 0.6
PPM1F-201ENST00000263212 PHLDB1Q86UU1 1377 aa18.75■□□□□ 0.59
PPM1F-201ENST00000263212 TDRD9Q8NDG6 1382 aaKnown RBP18.75■□□□□ 0.59
PPM1F-201ENST00000263212 GOLGA2Q08379 1002 aa18.75■□□□□ 0.59
PPM1F-201ENST00000263212 ERCC6Q03468 1493 aa18.74■□□□□ 0.59
PPM1F-201ENST00000263212 PTMSP20962 102 aa18.74■□□□□ 0.59
PPM1F-201ENST00000263212 PRKRIP1Q9H875 184 aaPredicted RBP18.74■□□□□ 0.59
PPM1F-201ENST00000263212 PMFBP1Q8TBY8 1022 aa18.73■□□□□ 0.59
PPM1F-201ENST00000263212 ZBED9Q6R2W3 1325 aa18.73■□□□□ 0.59
PPM1F-201ENST00000263212 SRPK2P78362 688 aaKnown RBP18.73■□□□□ 0.59
PPM1F-201ENST00000263212 GBP4Q96PP9 640 aa18.72■□□□□ 0.59
PPM1F-201ENST00000263212 KIF15Q9NS87 1388 aa18.72■□□□□ 0.59
PPM1F-201ENST00000263212 MSNP26038 577 aaKnown RBP18.72■□□□□ 0.59
PPM1F-201ENST00000263212 PLCB2Q00722 1185 aa18.71■□□□□ 0.59
PPM1F-201ENST00000263212 TPRNQ4KMQ1 711 aa18.71■□□□□ 0.59
PPM1F-201ENST00000263212 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
PPM1F-201ENST00000263212 MCCP23508 829 aa18.71■□□□□ 0.59
PPM1F-201ENST00000263212 SPRYD3Q8NCJ5 442 aa18.71■□□□□ 0.59
PPM1F-201ENST00000263212 USP35Q9P2H5 1018 aa18.7■□□□□ 0.58
PPM1F-201ENST00000263212 CCDC18Q5T9S5 1454 aa18.7■□□□□ 0.58
PPM1F-201ENST00000263212 FANCIQ9NVI1 1328 aa18.7■□□□□ 0.58
PPM1F-201ENST00000263212 MYBBP1AQ9BQG0 1328 aaKnown RBP18.69■□□□□ 0.58
PPM1F-201ENST00000263212 SLKQ9H2G2 1235 aaPredicted RBP18.69■□□□□ 0.58
PPM1F-201ENST00000263212 CADPSQ9ULU8 1353 aa18.68■□□□□ 0.58
PPM1F-201ENST00000263212 U2AF1L5P0DN76 240 aaPredicted RBP18.68■□□□□ 0.58
PPM1F-201ENST00000263212 U2AF1Q01081 240 aaKnown RBP eCLIP18.68■□□□□ 0.58
PPM1F-201ENST00000263212 OS9Q13438 667 aaPredicted RBP18.68■□□□□ 0.58
PPM1F-201ENST00000263212 SMARCA4P51532 1647 aa18.68■□□□□ 0.58
PPM1F-201ENST00000263212 EIF3AQ14152 1382 aaKnown RBP18.68■□□□□ 0.58
PPM1F-201ENST00000263212 CALD1Q05682 793 aaKnown RBP18.67■□□□□ 0.58
PPM1F-201ENST00000263212 RSPH4AQ5TD94 716 aa18.67■□□□□ 0.58
PPM1F-201ENST00000263212 ATAD2BQ9ULI0 1458 aa18.66■□□□□ 0.58
PPM1F-201ENST00000263212 KCNJ4P48050 445 aa18.66■□□□□ 0.58
PPM1F-201ENST00000263212 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
PPM1F-201ENST00000263212 CDK11BP21127 795 aaKnown RBP18.65■□□□□ 0.58
PPM1F-201ENST00000263212 EFCAB2Q5VUJ9 269 aa18.65■□□□□ 0.58
PPM1F-201ENST00000263212 GOLGA6L6A8MZA4 724 aa18.65■□□□□ 0.58
PPM1F-201ENST00000263212 HDGFL2Q7Z4V5 671 aaPredicted RBP18.64■□□□□ 0.58
PPM1F-201ENST00000263212 NRDCO43847 1150 aa18.64■□□□□ 0.57
PPM1F-201ENST00000263212 GOLGA6L4A6NEF3 574 aa18.63■□□□□ 0.57
PPM1F-201ENST00000263212 ITPRIPQ8IWB1 547 aa18.63■□□□□ 0.57
PPM1F-201ENST00000263212 FGD1P98174 961 aa18.63■□□□□ 0.57
PPM1F-201ENST00000263212 CHAF1AQ13111 956 aaPredicted RBP18.63■□□□□ 0.57
PPM1F-201ENST00000263212 CENPJQ9HC77 1338 aaPredicted RBP18.62■□□□□ 0.57
PPM1F-201ENST00000263212 PDE4AP27815 886 aa18.62■□□□□ 0.57
PPM1F-201ENST00000263212 ST20-MTHFSA0A0A6YYL1 179 aa18.61■□□□□ 0.57
PPM1F-201ENST00000263212 CENPQQ7L2Z9 268 aaPredicted RBP18.61■□□□□ 0.57
PPM1F-201ENST00000263212 GOLGA6L3A6NEY3 463 aa18.6■□□□□ 0.57
PPM1F-201ENST00000263212 HDGFP51858 240 aaKnown RBP18.6■□□□□ 0.57
PPM1F-201ENST00000263212 SAFB2Q14151 953 aaKnown RBP eCLIP18.6■□□□□ 0.57
PPM1F-201ENST00000263212 RRP1P56182 461 aaKnown RBP18.6■□□□□ 0.57
PPM1F-201ENST00000263212 GZF1Q9H116 711 aaPredicted RBP18.59■□□□□ 0.57
PPM1F-201ENST00000263212 SMC4Q9NTJ3 1288 aa18.58■□□□□ 0.56
PPM1F-201ENST00000263212 MFAP1P55081 439 aaKnown RBP18.57■□□□□ 0.56
PPM1F-201ENST00000263212 GGT6Q6P531 493 aa18.57■□□□□ 0.56
PPM1F-201ENST00000263212 FAM161AQ3B820 660 aa18.56■□□□□ 0.56
PPM1F-201ENST00000263212 RTF1Q92541 710 aaKnown RBP18.56■□□□□ 0.56
PPM1F-201ENST00000263212 A0A0G2JS52 829 aa18.56■□□□□ 0.56
PPM1F-201ENST00000263212 HNRNPMP52272 730 aaKnown RBP eCLIP18.56■□□□□ 0.562e-6■□□□□ 8.9
PPM1F-201ENST00000263212 USP47Q96K76 1375 aa18.56■□□□□ 0.56
PPM1F-201ENST00000263212 EXOC6Q8TAG9 804 aa18.55■□□□□ 0.56
PPM1F-201ENST00000263212 CCDC146Q8IYE0 955 aa18.55■□□□□ 0.56
PPM1F-201ENST00000263212 STK26Q9P289 416 aa18.54■□□□□ 0.56
PPM1F-201ENST00000263212 PANK3Q9H999 370 aa18.53■□□□□ 0.56
PPM1F-201ENST00000263212 CLUAP1Q96AJ1 413 aa18.52■□□□□ 0.56
PPM1F-201ENST00000263212 CCDC144AA2RUR9 1427 aa18.52■□□□□ 0.56
PPM1F-201ENST00000263212 KIAA1211Q6ZU35 1233 aa18.52■□□□□ 0.56
PPM1F-201ENST00000263212 KIF21BO75037 1637 aa18.51■□□□□ 0.55
PPM1F-201ENST00000263212 SYAP1Q96A49 352 aaPredicted RBP18.51■□□□□ 0.55
PPM1F-201ENST00000263212 APBB1O00213 710 aa18.51■□□□□ 0.55
PPM1F-201ENST00000263212 TERF2IPQ9NYB0 399 aa18.5■□□□□ 0.55
PPM1F-201ENST00000263212 KIAA2012Q0VF49 1180 aa18.5■□□□□ 0.55
PPM1F-201ENST00000263212 UACAQ9BZF9 1416 aa18.5■□□□□ 0.55
PPM1F-201ENST00000263212 CGNL1Q0VF96 1302 aa18.49■□□□□ 0.55
PPM1F-201ENST00000263212 E9PSI1 815 aa18.49■□□□□ 0.55
PPM1F-201ENST00000263212 LMOD2Q6P5Q4 547 aa18.49■□□□□ 0.55
PPM1F-201ENST00000263212 CCDC7Q96M83 1385 aa18.49■□□□□ 0.55
PPM1F-201ENST00000263212 KIF3BO15066 747 aa18.48■□□□□ 0.55
PPM1F-201ENST00000263212 CRBNQ96SW2 442 aa18.48■□□□□ 0.55
PPM1F-201ENST00000263212 GSE1Q14687 1217 aa18.48■□□□□ 0.55
PPM1F-201ENST00000263212 NAP1L2Q9ULW6 460 aaPredicted RBP18.48■□□□□ 0.55
PPM1F-201ENST00000263212 FGD6Q6ZV73 1430 aa18.48■□□□□ 0.55
PPM1F-201ENST00000263212 IGF1RP08069 1367 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms