RNA–Protein interactions for RNA: ENST00000263212.9

PPM1F-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PPM1F, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-201ENST00000263212 DCAF8L2P0C7V8 631 aa24.99■■□□□ 1.59
PPM1F-201ENST00000263212 NISCHQ9Y2I1 1504 aa24.88■■□□□ 1.57
PPM1F-201ENST00000263212 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
PPM1F-201ENST00000263212 SHROOM4Q9ULL8 1493 aa23.85■■□□□ 1.41
PPM1F-201ENST00000263212 EHMT2Q96KQ7 1210 aa23.18■■□□□ 1.3
PPM1F-201ENST00000263212 PELP1Q8IZL8 1130 aaKnown RBP23.15■■□□□ 1.3
PPM1F-201ENST00000263212 PCGF6Q9BYE7 350 aa23.08■■□□□ 1.29
PPM1F-201ENST00000263212 APLP2Q06481 763 aa22.9■■□□□ 1.26
PPM1F-201ENST00000263212 ZEB1P37275 1124 aaPredicted RBP22.84■■□□□ 1.25
PPM1F-201ENST00000263212 FAM9AQ8IZU1 332 aaPredicted RBP22.84■■□□□ 1.25
PPM1F-201ENST00000263212 CENPBP07199 599 aaPredicted RBP22.64■■□□□ 1.21
PPM1F-201ENST00000263212 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
PPM1F-201ENST00000263212 TTBK1Q5TCY1 1321 aaPredicted RBP22.49■■□□□ 1.19
PPM1F-201ENST00000263212 CCER1Q8TC90 406 aaPredicted RBP22.49■■□□□ 1.19
PPM1F-201ENST00000263212 HRCP23327 699 aa22.28■■□□□ 1.16
PPM1F-201ENST00000263212 TRIM26Q12899 539 aaPredicted RBP22.24■■□□□ 1.15
PPM1F-201ENST00000263212 UBTFP17480 764 aaKnown RBP22.16■■□□□ 1.14
PPM1F-201ENST00000263212 MYT1Q01538 1121 aa22.15■■□□□ 1.14
PPM1F-201ENST00000263212 RANGAP1P46060 587 aaPredicted RBP22.1■■□□□ 1.13
PPM1F-201ENST00000263212 ERICH6Q7L0X2 663 aa22.06■■□□□ 1.12
PPM1F-201ENST00000263212 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
PPM1F-201ENST00000263212 YTHDC1Q96MU7 727 aaKnown RBP21.94■■□□□ 1.1
PPM1F-201ENST00000263212 NEFLP07196 543 aa21.91■■□□□ 1.1
PPM1F-201ENST00000263212 PPARGC1BQ86YN6 1023 aaKnown RBP21.89■■□□□ 1.1
PPM1F-201ENST00000263212 LOC105371045A0A1W2PR82 267 aa21.87■■□□□ 1.09
PPM1F-201ENST00000263212 ATP1B4Q9UN42 357 aaPredicted RBP21.85■■□□□ 1.09
PPM1F-201ENST00000263212 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
PPM1F-201ENST00000263212 DIEXFQ68CQ4 756 aaKnown RBP21.43■■□□□ 1.02
PPM1F-201ENST00000263212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.4■■□□□ 1.02
PPM1F-201ENST00000263212 ITGAEP38570 1179 aa21.38■■□□□ 1.01
PPM1F-201ENST00000263212 DAXXQ9UER7 740 aaPredicted RBP21.08■□□□□ 0.97
PPM1F-201ENST00000263212 GTF3C3Q9Y5Q9 886 aa21.07■□□□□ 0.96
PPM1F-201ENST00000263212 POLR3GLQ9BT43 218 aa21.06■□□□□ 0.96
PPM1F-201ENST00000263212 ZNF316A6NFI3 1004 aaPredicted RBP20.97■□□□□ 0.95
PPM1F-201ENST00000263212 ACIN1Q9UKV3 1341 aaKnown RBP20.91■□□□□ 0.94
PPM1F-201ENST00000263212 FAM50AQ14320 339 aaKnown RBP20.9■□□□□ 0.94
PPM1F-201ENST00000263212 DCAF1Q9Y4B6 1507 aa20.87■□□□□ 0.93
PPM1F-201ENST00000263212 CNGB1Q14028 1251 aaPredicted RBP20.84■□□□□ 0.93
PPM1F-201ENST00000263212 RTL5Q5HYW3 569 aaPredicted RBP20.82■□□□□ 0.92
PPM1F-201ENST00000263212 NEUROD1Q13562 356 aa20.79■□□□□ 0.92
PPM1F-201ENST00000263212 ABCC9O60706 1549 aa20.78■□□□□ 0.92
PPM1F-201ENST00000263212 ANP32CO43423 234 aa20.78■□□□□ 0.92
PPM1F-201ENST00000263212 CSRNP3Q8WYN3 585 aa20.76■□□□□ 0.91
PPM1F-201ENST00000263212 MYT1LQ9UL68 1186 aa20.73■□□□□ 0.91
PPM1F-201ENST00000263212 BCANQ96GW7 911 aa20.72■□□□□ 0.91
PPM1F-201ENST00000263212 TRIM52Q96A61 297 aa20.72■□□□□ 0.91
PPM1F-201ENST00000263212 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
PPM1F-201ENST00000263212 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
PPM1F-201ENST00000263212 CDK11AQ9UQ88 783 aaPredicted RBP20.66■□□□□ 0.9
PPM1F-201ENST00000263212 CLSPNQ9HAW4 1339 aa20.62■□□□□ 0.89
PPM1F-201ENST00000263212 SLC4A1APQ9BWU0 796 aaKnown RBP20.46■□□□□ 0.87
PPM1F-201ENST00000263212 ZNF326Q5BKZ1 582 aaKnown RBP20.41■□□□□ 0.86
PPM1F-201ENST00000263212 SCRIBQ14160 1630 aa20.34■□□□□ 0.85
PPM1F-201ENST00000263212 P3H3Q8IVL6 736 aa20.32■□□□□ 0.84
PPM1F-201ENST00000263212 SCAF1Q9H7N4 1312 aaKnown RBP20.32■□□□□ 0.84
PPM1F-201ENST00000263212 FKBP8Q14318 412 aa20.31■□□□□ 0.84
PPM1F-201ENST00000263212 MYO15BQ96JP2 1530 aa20.3■□□□□ 0.84
PPM1F-201ENST00000263212 ANP32AP39687 249 aaKnown RBP20.29■□□□□ 0.84
PPM1F-201ENST00000263212 TONSLQ96HA7 1378 aa20.27■□□□□ 0.83
PPM1F-201ENST00000263212 CCDC180Q9P1Z9 1646 aa20.25■□□□□ 0.83
PPM1F-201ENST00000263212 DDX10Q13206 875 aaKnown RBP20.22■□□□□ 0.83
PPM1F-201ENST00000263212 HNRNPUQ00839 825 aaKnown RBP eCLIP20.18■□□□□ 0.82
PPM1F-201ENST00000263212 MIER1Q8N108 512 aa20.17■□□□□ 0.82
PPM1F-201ENST00000263212 CANXP27824 592 aaKnown RBP20.13■□□□□ 0.81
PPM1F-201ENST00000263212 ZBTB47Q9UFB7 747 aaPredicted RBP20.11■□□□□ 0.81
PPM1F-201ENST00000263212 EEA1Q15075 1411 aa20.09■□□□□ 0.81
PPM1F-201ENST00000263212 CLIP1P30622 1438 aa20.09■□□□□ 0.81
PPM1F-201ENST00000263212 FBLN2P98095 1184 aa20.07■□□□□ 0.8
PPM1F-201ENST00000263212 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
PPM1F-201ENST00000263212 ARID3CA6NKF2 412 aa20.06■□□□□ 0.8
PPM1F-201ENST00000263212 NPM2Q86SE8 214 aaKnown RBP20.03■□□□□ 0.8
PPM1F-201ENST00000263212 FAM9BQ8IZU0 186 aa20.03■□□□□ 0.8
PPM1F-201ENST00000263212 ZNF777Q9ULD5 760 aaPredicted RBP20.03■□□□□ 0.8
PPM1F-201ENST00000263212 CEP162Q5TB80 1403 aa20.02■□□□□ 0.79
PPM1F-201ENST00000263212 GOLGA3Q08378 1498 aa19.98■□□□□ 0.79
PPM1F-201ENST00000263212 NEFMP07197 916 aa19.96■□□□□ 0.79
PPM1F-201ENST00000263212 CCDC136Q96JN2 1154 aa19.94■□□□□ 0.78
PPM1F-201ENST00000263212 TNIKQ9UKE5 1360 aa19.91■□□□□ 0.78
PPM1F-201ENST00000263212 MRS2Q9HD23 443 aa19.91■□□□□ 0.78
PPM1F-201ENST00000263212 TMC1Q8TDI8 760 aa19.91■□□□□ 0.78
PPM1F-201ENST00000263212 MTUS2Q5JR59 1369 aa19.87■□□□□ 0.77
PPM1F-201ENST00000263212 CHIC2Q9UKJ5 165 aa19.87■□□□□ 0.77
PPM1F-201ENST00000263212 EIF4G2P78344 907 aaKnown RBP eCLIP19.83■□□□□ 0.76
PPM1F-201ENST00000263212 UPF2Q9HAU5 1272 aaKnown RBP19.83■□□□□ 0.76
PPM1F-201ENST00000263212 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.8■□□□□ 0.76
PPM1F-201ENST00000263212 WRNQ14191 1432 aaPredicted RBP eCLIP19.79■□□□□ 0.765e-12■■■■□ 20.3
PPM1F-201ENST00000263212 HIRIP3Q9BW71 556 aaPredicted RBP19.78■□□□□ 0.76
PPM1F-201ENST00000263212 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
PPM1F-201ENST00000263212 SALL2Q9Y467 1007 aaPredicted RBP19.77■□□□□ 0.76
PPM1F-201ENST00000263212 BCL11AQ9H165 835 aa19.75■□□□□ 0.75
PPM1F-201ENST00000263212 IRX6P78412 446 aaPredicted RBP19.75■□□□□ 0.75
PPM1F-201ENST00000263212 NBR1Q14596 966 aa19.75■□□□□ 0.75
PPM1F-201ENST00000263212 RB1CC1Q8TDY2 1594 aa19.74■□□□□ 0.75
PPM1F-201ENST00000263212 ANP32BQ92688 251 aaKnown RBP19.73■□□□□ 0.75
PPM1F-201ENST00000263212 EIF5BO60841 1220 aaKnown RBP19.72■□□□□ 0.75
PPM1F-201ENST00000263212 TSPY4P0CV99 314 aa19.71■□□□□ 0.75
PPM1F-201ENST00000263212 TSPY10P0CW01 314 aa19.71■□□□□ 0.75
PPM1F-201ENST00000263212 ANP32EQ9BTT0 268 aa19.7■□□□□ 0.74
PPM1F-201ENST00000263212 HSP90AA1P07900 732 aaKnown RBP19.7■□□□□ 0.74
PPM1F-201ENST00000263212 WDR43Q15061 677 aaKnown RBP eCLIP19.69■□□□□ 0.742e-6■□□□□ 8.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms