RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 SCAPERQ9BY12 1400 aa33.67■■■□□ 2.98
CCNE1-201ENST00000262643 CDC42BPBQ9Y5S2 1711 aa33.67■■■□□ 2.98
CCNE1-201ENST00000262643 PREX2Q70Z35 1606 aa33.64■■■□□ 2.98
CCNE1-201ENST00000262643 KDM4FA0A1W2PPD8 638 aa33.64■■■□□ 2.98
CCNE1-201ENST00000262643 CDC42BPAQ5VT25 1732 aa33.62■■■□□ 2.97
CCNE1-201ENST00000262643 EHBP1L1Q8N3D4 1523 aa33.6■■■□□ 2.97
CCNE1-201ENST00000262643 POGZQ7Z3K3 1410 aa33.58■■■□□ 2.97
CCNE1-201ENST00000262643 TIAM1Q13009 1591 aa33.57■■■□□ 2.96
CCNE1-201ENST00000262643 GPATCH8Q9UKJ3 1502 aaKnown RBP33.55■■■□□ 2.96
CCNE1-201ENST00000262643 CCNB3Q8WWL7 1395 aa33.55■■■□□ 2.96
CCNE1-201ENST00000262643 ZNF777Q9ULD5 760 aaPredicted RBP33.53■■■□□ 2.96
CCNE1-201ENST00000262643 ZMYM4Q5VZL5 1548 aa33.52■■■□□ 2.96
CCNE1-201ENST00000262643 ARHGEF40Q8TER5 1519 aa33.49■■■□□ 2.95
CCNE1-201ENST00000262643 AFAP1Q8N556 730 aa33.48■■■□□ 2.95
CCNE1-201ENST00000262643 CFDP1Q9UEE9 299 aaPredicted RBP33.48■■■□□ 2.95
CCNE1-201ENST00000262643 ABCC1P33527 1531 aa33.47■■■□□ 2.95
CCNE1-201ENST00000262643 ZNF518AQ6AHZ1 1483 aa33.47■■■□□ 2.95
CCNE1-201ENST00000262643 ZFYVE16Q7Z3T8 1539 aa33.46■■■□□ 2.95
CCNE1-201ENST00000262643 YEATS2Q9ULM3 1422 aa33.46■■■□□ 2.95
CCNE1-201ENST00000262643 ARHGEF12Q9NZN5 1544 aa33.45■■■□□ 2.95
CCNE1-201ENST00000262643 MAGI2Q86UL8 1455 aa33.44■■■□□ 2.94
CCNE1-201ENST00000262643 SUPT6HQ7KZ85 1726 aaKnown RBP33.44■■■□□ 2.94
CCNE1-201ENST00000262643 LRRC9Q6ZRR7 1453 aa33.43■■■□□ 2.94
CCNE1-201ENST00000262643 SAMD9LQ8IVG5 1584 aa33.43■■■□□ 2.94
CCNE1-201ENST00000262643 ARID4BQ4LE39 1312 aaPredicted RBP33.43■■■□□ 2.94
CCNE1-201ENST00000262643 NCOA2Q15596 1464 aa33.42■■■□□ 2.94
CCNE1-201ENST00000262643 ITSN2Q9NZM3 1697 aa33.41■■■□□ 2.94
CCNE1-201ENST00000262643 MYT1LQ9UL68 1186 aa33.41■■■□□ 2.94
CCNE1-201ENST00000262643 TRAPPC8Q9Y2L5 1435 aa33.41■■■□□ 2.94
CCNE1-201ENST00000262643 KANK4Q5T7N3 995 aaPredicted RBP33.4■■■□□ 2.94
CCNE1-201ENST00000262643 MAP3K1Q13233 1512 aa33.4■■■□□ 2.94
CCNE1-201ENST00000262643 KDM5CP41229 1560 aa33.39■■■□□ 2.94
CCNE1-201ENST00000262643 APLP2Q06481 763 aa33.38■■■□□ 2.93
CCNE1-201ENST00000262643 SYCP2Q9BX26 1530 aa33.37■■■□□ 2.93
CCNE1-201ENST00000262643 HNRNPMP52272 730 aaKnown RBP eCLIP33.36■■■□□ 2.93
CCNE1-201ENST00000262643 HECW2Q9P2P5 1572 aa33.33■■■□□ 2.93
CCNE1-201ENST00000262643 ZNF644Q9H582 1327 aaPredicted RBP33.33■■■□□ 2.93
CCNE1-201ENST00000262643 PLEKHH2Q8IVE3 1493 aa33.31■■■□□ 2.92
CCNE1-201ENST00000262643 ATP10AO60312 1499 aa33.29■■■□□ 2.92
CCNE1-201ENST00000262643 KIAA1107Q9UPP5 1409 aa33.29■■■□□ 2.92
CCNE1-201ENST00000262643 SIGLEC1Q9BZZ2 1709 aa33.28■■■□□ 2.92
CCNE1-201ENST00000262643 MLH3Q9UHC1 1453 aa33.28■■■□□ 2.92
CCNE1-201ENST00000262643 BCORL1Q5H9F3 1711 aa33.27■■■□□ 2.92
CCNE1-201ENST00000262643 C9orf84Q5VXU9 1444 aa33.25■■■□□ 2.91
CCNE1-201ENST00000262643 ADAMTSL3P82987 1691 aa33.23■■■□□ 2.91
CCNE1-201ENST00000262643 DIP2CQ9Y2E4 1556 aa33.23■■■□□ 2.91
CCNE1-201ENST00000262643 ABCA6Q8N139 1617 aa33.22■■■□□ 2.91
CCNE1-201ENST00000262643 SPAG9O60271 1321 aaKnown RBP33.21■■■□□ 2.91
CCNE1-201ENST00000262643 KIDINS220Q9ULH0 1771 aa33.21■■■□□ 2.91
CCNE1-201ENST00000262643 MLECQ14165 292 aa33.21■■■□□ 2.91
CCNE1-201ENST00000262643 CAMSAP2Q08AD1 1489 aa33.18■■■□□ 2.9
CCNE1-201ENST00000262643 MADDQ8WXG6 1647 aa33.16■■■□□ 2.9
CCNE1-201ENST00000262643 MBD5Q9P267 1494 aa33.16■■■□□ 2.9
CCNE1-201ENST00000262643 MYOM3Q5VTT5 1437 aa33.13■■■□□ 2.89
CCNE1-201ENST00000262643 ATP7AQ04656 1500 aa33.12■■■□□ 2.89
CCNE1-201ENST00000262643 PTPRMP28827 1452 aa33.1■■■□□ 2.89
CCNE1-201ENST00000262643 INO80Q9ULG1 1556 aaPredicted RBP33.09■■■□□ 2.89
CCNE1-201ENST00000262643 REREQ9P2R6 1566 aa33.09■■■□□ 2.89
CCNE1-201ENST00000262643 RIMS1Q86UR5 1692 aaKnown RBP33.07■■■□□ 2.89
CCNE1-201ENST00000262643 CCDC141Q6ZP82 1450 aa33.06■■■□□ 2.88
CCNE1-201ENST00000262643 MIA2Q96PC5 1412 aa33.05■■■□□ 2.88
CCNE1-201ENST00000262643 RSPH4AQ5TD94 716 aa33.02■■■□□ 2.88
CCNE1-201ENST00000262643 FER1L4A9Z1Z3 1794 aa33.02■■■□□ 2.88
CCNE1-201ENST00000262643 PLPPR3Q6T4P5 718 aa33.01■■■□□ 2.88
CCNE1-201ENST00000262643 AGLP35573 1532 aa33■■■□□ 2.87
CCNE1-201ENST00000262643 ARHGEF5Q12774 1597 aa32.99■■■□□ 2.87
CCNE1-201ENST00000262643 RTEL1-TNFRSF6BF6WH68 1400 aa32.97■■■□□ 2.87
CCNE1-201ENST00000262643 A2MP01023 1474 aa32.97■■■□□ 2.87
CCNE1-201ENST00000262643 TSPY4P0CV99 314 aa32.95■■■□□ 2.87
CCNE1-201ENST00000262643 TSPY10P0CW01 314 aa32.95■■■□□ 2.87
CCNE1-201ENST00000262643 ADGBQ8N7X0 1667 aa32.94■■■□□ 2.86
CCNE1-201ENST00000262643 PTPN23Q9H3S7 1636 aa32.93■■■□□ 2.86
CCNE1-201ENST00000262643 FGD6Q6ZV73 1430 aa32.92■■■□□ 2.86
CCNE1-201ENST00000262643 PLXNC1O60486 1568 aa32.92■■■□□ 2.86
CCNE1-201ENST00000262643 PPARGC1BQ86YN6 1023 aaKnown RBP32.87■■■□□ 2.85
CCNE1-201ENST00000262643 ESF1Q9H501 851 aaKnown RBP32.87■■■□□ 2.85
CCNE1-201ENST00000262643 CEBPAP49715 358 aaPredicted RBP32.84■■■□□ 2.85
CCNE1-201ENST00000262643 DHX29Q7Z478 1369 aaKnown RBP32.84■■■□□ 2.85
CCNE1-201ENST00000262643 GGT6Q6P531 493 aa32.82■■■□□ 2.84
CCNE1-201ENST00000262643 TCOF1Q13428 1488 aaKnown RBP32.82■■■□□ 2.84
CCNE1-201ENST00000262643 MAST1Q9Y2H9 1570 aa32.81■■■□□ 2.84
CCNE1-201ENST00000262643 ABCC5O15440 1437 aa32.78■■■□□ 2.84
CCNE1-201ENST00000262643 FAM50AQ14320 339 aaKnown RBP32.76■■■□□ 2.83
CCNE1-201ENST00000262643 KIF3BO15066 747 aa32.75■■■□□ 2.83
CCNE1-201ENST00000262643 DAPK1P53355 1430 aa32.75■■■□□ 2.83
CCNE1-201ENST00000262643 DNMT1P26358 1616 aaKnown RBP32.74■■■□□ 2.83
CCNE1-201ENST00000262643 CROCC2H7BZ55 1655 aa32.74■■■□□ 2.83
CCNE1-201ENST00000262643 CNTLNQ9NXG0 1405 aa32.73■■■□□ 2.83
CCNE1-201ENST00000262643 C3P01024 1663 aa32.72■■■□□ 2.83
CCNE1-201ENST00000262643 SHANK2Q9UPX8 1470 aa32.7■■■□□ 2.83
CCNE1-201ENST00000262643 CLTCQ00610 1675 aaKnown RBP32.69■■■□□ 2.82
CCNE1-201ENST00000262643 CHIC2Q9UKJ5 165 aa32.68■■■□□ 2.82
CCNE1-201ENST00000262643 LMTK3Q96Q04 1460 aa32.68■■■□□ 2.82
CCNE1-201ENST00000262643 RRP7BPQ9NSQ0 103 aa32.66■■■□□ 2.82
CCNE1-201ENST00000262643 ZMYM3Q14202 1370 aa32.65■■■□□ 2.82
CCNE1-201ENST00000262643 KIF15Q9NS87 1388 aa32.64■■■□□ 2.82
CCNE1-201ENST00000262643 MROH2AA6NES4 1674 aa32.64■■■□□ 2.82
CCNE1-201ENST00000262643 PPP6R1Q9UPN7 881 aa32.63■■■□□ 2.81
CCNE1-201ENST00000262643 DUOX2Q9NRD8 1548 aa32.61■■■□□ 2.81
CCNE1-201ENST00000262643 HSPA2P54652 639 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms