RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 KANK4Q5T7N3 995 aaPredicted RBP10.63□□□□□ -0.71
SNCAIP-201ENST00000261367 DNMBPQ6XZF7 1577 aa10.63□□□□□ -0.71
SNCAIP-201ENST00000261367 HSP90AB1P08238 724 aaKnown RBP10.63□□□□□ -0.71
SNCAIP-201ENST00000261367 FANCD2Q9BXW9 1451 aa10.63□□□□□ -0.71
SNCAIP-201ENST00000261367 TAF3Q5VWG9 929 aa10.63□□□□□ -0.71
SNCAIP-201ENST00000261367 CUX2O14529 1486 aa10.62□□□□□ -0.71
SNCAIP-201ENST00000261367 SYAP1Q96A49 352 aaPredicted RBP10.62□□□□□ -0.71
SNCAIP-201ENST00000261367 TOPBP1Q92547 1522 aa10.61□□□□□ -0.71
SNCAIP-201ENST00000261367 PDE3BQ13370 1112 aa10.61□□□□□ -0.71
SNCAIP-201ENST00000261367 ISY1Q9ULR0 285 aaKnown RBP10.61□□□□□ -0.71
SNCAIP-201ENST00000261367 NUDCQ9Y266 331 aa10.61□□□□□ -0.71
SNCAIP-201ENST00000261367 POLA1P09884 1462 aaPredicted RBP10.61□□□□□ -0.71
SNCAIP-201ENST00000261367 RAD54L2Q9Y4B4 1467 aa10.61□□□□□ -0.71
SNCAIP-201ENST00000261367 URB2Q14146 1524 aaKnown RBP10.61□□□□□ -0.71
SNCAIP-201ENST00000261367 ABCA10Q8WWZ4 1543 aa10.6□□□□□ -0.71
SNCAIP-201ENST00000261367 KIF21AQ7Z4S6 1674 aa10.6□□□□□ -0.71
SNCAIP-201ENST00000261367 RRBP1Q9P2E9 1410 aaKnown RBP10.59□□□□□ -0.71
SNCAIP-201ENST00000261367 SALL2Q9Y467 1007 aaPredicted RBP10.59□□□□□ -0.71
SNCAIP-201ENST00000261367 ABCA5Q8WWZ7 1642 aa10.59□□□□□ -0.71
SNCAIP-201ENST00000261367 A0A0U1RQG5 324 aaPredicted RBP10.58□□□□□ -0.72
SNCAIP-201ENST00000261367 CALRP27797 417 aaKnown RBP10.58□□□□□ -0.72
SNCAIP-201ENST00000261367 CFAP43Q8NDM7 1665 aa10.58□□□□□ -0.72
SNCAIP-201ENST00000261367 CTTNBP2Q8WZ74 1663 aa10.57□□□□□ -0.72
SNCAIP-201ENST00000261367 TIAM1Q13009 1591 aa10.56□□□□□ -0.72
SNCAIP-201ENST00000261367 LAMC3Q9Y6N6 1575 aa10.56□□□□□ -0.72
SNCAIP-201ENST00000261367 ZRSR1Q15695 479 aaKnown RBP10.55□□□□□ -0.72
SNCAIP-201ENST00000261367 CDCA8Q53HL2 280 aa10.55□□□□□ -0.72
SNCAIP-201ENST00000261367 KCNH8Q96L42 1107 aa10.55□□□□□ -0.72
SNCAIP-201ENST00000261367 ZBED9Q6R2W3 1325 aa10.55□□□□□ -0.72
SNCAIP-201ENST00000261367 CCNB3Q8WWL7 1395 aa10.55□□□□□ -0.72
SNCAIP-201ENST00000261367 TARBP1Q13395 1621 aaKnown RBP10.55□□□□□ -0.72
SNCAIP-201ENST00000261367 PCF11O94913 1555 aaKnown RBP10.55□□□□□ -0.72
SNCAIP-201ENST00000261367 PHLDB1Q86UU1 1377 aa10.54□□□□□ -0.72
SNCAIP-201ENST00000261367 MAP3K1Q13233 1512 aa10.54□□□□□ -0.72
SNCAIP-201ENST00000261367 CCDC66A2RUB6 948 aa10.54□□□□□ -0.72
SNCAIP-201ENST00000261367 PDE4AP27815 886 aa10.54□□□□□ -0.72
SNCAIP-201ENST00000261367 GOLGA6L1Q8N7Z2 621 aa10.54□□□□□ -0.72
SNCAIP-201ENST00000261367 PHF14O94880 888 aa10.54□□□□□ -0.72
SNCAIP-201ENST00000261367 MRE11P49959 708 aa10.53□□□□□ -0.72
SNCAIP-201ENST00000261367 RCAN3Q9UKA8 241 aa10.53□□□□□ -0.72
SNCAIP-201ENST00000261367 SETD5Q9C0A6 1442 aa10.53□□□□□ -0.72
SNCAIP-201ENST00000261367 RGS3P49796 1198 aa10.53□□□□□ -0.72
SNCAIP-201ENST00000261367 FAM161AQ3B820 660 aa10.53□□□□□ -0.72
SNCAIP-201ENST00000261367 HIRIP3Q9BW71 556 aaPredicted RBP10.52□□□□□ -0.72
SNCAIP-201ENST00000261367 CARMIL1Q5VZK9 1371 aa10.52□□□□□ -0.72
SNCAIP-201ENST00000261367 CUL7Q14999 1698 aa10.52□□□□□ -0.73
SNCAIP-201ENST00000261367 SETQ01105 290 aaPredicted RBP10.52□□□□□ -0.73
SNCAIP-201ENST00000261367 CENPQQ7L2Z9 268 aaPredicted RBP10.51□□□□□ -0.73
SNCAIP-201ENST00000261367 SAMD9Q5K651 1589 aa10.5□□□□□ -0.73
SNCAIP-201ENST00000261367 DHX57Q6P158 1386 aaKnown RBP10.5□□□□□ -0.73
SNCAIP-201ENST00000261367 RALBP1Q15311 655 aa10.5□□□□□ -0.73
SNCAIP-201ENST00000261367 PMFBP1Q8TBY8 1022 aa10.5□□□□□ -0.73
SNCAIP-201ENST00000261367 MAPK8IP3Q9UPT6 1336 aa10.5□□□□□ -0.73
SNCAIP-201ENST00000261367 P3H3Q8IVL6 736 aa10.5□□□□□ -0.73
SNCAIP-201ENST00000261367 HTATSF1O43719 755 aaKnown RBP10.49□□□□□ -0.73
SNCAIP-201ENST00000261367 ROCK2O75116 1388 aaKnown RBP10.49□□□□□ -0.73
SNCAIP-201ENST00000261367 ZNF771Q7L3S4 317 aaPredicted RBP10.49□□□□□ -0.73
SNCAIP-201ENST00000261367 CALD1Q05682 793 aaKnown RBP10.48□□□□□ -0.73
SNCAIP-201ENST00000261367 SNAPC4Q5SXM2 1469 aa10.48□□□□□ -0.73
SNCAIP-201ENST00000261367 NOM1Q5C9Z4 860 aaKnown RBP10.48□□□□□ -0.73
SNCAIP-201ENST00000261367 MAPKBP1O60336 1514 aa10.48□□□□□ -0.73
SNCAIP-201ENST00000261367 TSPYL1Q9H0U9 437 aa10.48□□□□□ -0.73
SNCAIP-201ENST00000261367 FTSJ3Q8IY81 847 aaKnown RBP10.48□□□□□ -0.73
SNCAIP-201ENST00000261367 NFKBIBQ15653 356 aa10.47□□□□□ -0.73
SNCAIP-201ENST00000261367 LRRC9Q6ZRR7 1453 aa10.47□□□□□ -0.73
SNCAIP-201ENST00000261367 TEX35Q5T0J7 233 aa10.47□□□□□ -0.73
SNCAIP-201ENST00000261367 MCCP23508 829 aa10.46□□□□□ -0.73
SNCAIP-201ENST00000261367 HMGN5P82970 282 aaKnown RBP10.46□□□□□ -0.73
SNCAIP-201ENST00000261367 RWDD1Q9H446 243 aaPredicted RBP10.46□□□□□ -0.73
SNCAIP-201ENST00000261367 MTUS2Q5JR59 1369 aa10.46□□□□□ -0.74
SNCAIP-201ENST00000261367 IL27Q8NEV9 243 aa10.45□□□□□ -0.74
SNCAIP-201ENST00000261367 PBRM1Q86U86 1689 aa10.45□□□□□ -0.74
SNCAIP-201ENST00000261367 PDCL3Q9H2J4 239 aa10.45□□□□□ -0.74
SNCAIP-201ENST00000261367 GPS2Q13227 327 aa10.45□□□□□ -0.74
SNCAIP-201ENST00000261367 AAMPQ13685 434 aa10.44□□□□□ -0.74
SNCAIP-201ENST00000261367 CFAP53Q96M91 514 aa10.44□□□□□ -0.74
SNCAIP-201ENST00000261367 CHMP5Q9NZZ3 219 aa10.44□□□□□ -0.74
SNCAIP-201ENST00000261367 TPM3P06753 285 aa10.44□□□□□ -0.74
SNCAIP-201ENST00000261367 FRAT1Q92837 279 aaPredicted RBP10.44□□□□□ -0.74
SNCAIP-201ENST00000261367 APPP05067 770 aa10.43□□□□□ -0.74
SNCAIP-201ENST00000261367 GZF1Q9H116 711 aaPredicted RBP10.43□□□□□ -0.74
SNCAIP-201ENST00000261367 DIAPH3Q9NSV4 1193 aa10.43□□□□□ -0.74
SNCAIP-201ENST00000261367 FAM13BQ9NYF5 915 aa10.43□□□□□ -0.74
SNCAIP-201ENST00000261367 SLKQ9H2G2 1235 aaPredicted RBP10.43□□□□□ -0.74
SNCAIP-201ENST00000261367 PPP1R15AO75807 674 aaPredicted RBP10.43□□□□□ -0.74
SNCAIP-201ENST00000261367 EFCAB5A4FU69 1503 aa10.42□□□□□ -0.74
SNCAIP-201ENST00000261367 CCDC173Q0VFZ6 552 aa10.42□□□□□ -0.74
SNCAIP-201ENST00000261367 CWC15Q9P013 229 aaKnown RBP10.42□□□□□ -0.74
SNCAIP-201ENST00000261367 FHAD1B1AJZ9 1412 aa10.42□□□□□ -0.74
SNCAIP-201ENST00000261367 DRC7Q8IY82 874 aa10.42□□□□□ -0.74
SNCAIP-201ENST00000261367 FHOD3Q2V2M9 1422 aa10.42□□□□□ -0.74
SNCAIP-201ENST00000261367 CCDC39Q9UFE4 941 aa10.42□□□□□ -0.74
SNCAIP-201ENST00000261367 AQRO60306 1485 aaKnown RBP eCLIP10.42□□□□□ -0.74
SNCAIP-201ENST00000261367 SIN3AQ96ST3 1273 aa10.42□□□□□ -0.74
SNCAIP-201ENST00000261367 KTN1Q86UP2 1357 aaKnown RBP10.41□□□□□ -0.74
SNCAIP-201ENST00000261367 MAGI3Q5TCQ9 1506 aa10.41□□□□□ -0.74
SNCAIP-201ENST00000261367 C11orf95C9JLR9 678 aaPredicted RBP10.41□□□□□ -0.74
SNCAIP-201ENST00000261367 KNSTRNQ9Y448 316 aa10.41□□□□□ -0.74
SNCAIP-201ENST00000261367 PLCB2Q00722 1185 aa10.41□□□□□ -0.74
SNCAIP-201ENST00000261367 EIF3AQ14152 1382 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms