RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 NISCHQ9Y2I1 1504 aa15.12■□□□□ 0.01
SNCAIP-201ENST00000261367 MYT1Q01538 1121 aa14.17□□□□□ -0.14
SNCAIP-201ENST00000261367 PELP1Q8IZL8 1130 aaKnown RBP14.13□□□□□ -0.15
SNCAIP-201ENST00000261367 ZEB1P37275 1124 aaPredicted RBP13.2□□□□□ -0.3
SNCAIP-201ENST00000261367 CENPBP07199 599 aaPredicted RBP13.16□□□□□ -0.3
SNCAIP-201ENST00000261367 TTBK1Q5TCY1 1321 aaPredicted RBP13.12□□□□□ -0.31
SNCAIP-201ENST00000261367 CCDC180Q9P1Z9 1646 aa12.97□□□□□ -0.33
SNCAIP-201ENST00000261367 CCER1Q8TC90 406 aaPredicted RBP12.93□□□□□ -0.34
SNCAIP-201ENST00000261367 HRCP23327 699 aa12.87□□□□□ -0.35
SNCAIP-201ENST00000261367 ERICH6Q7L0X2 663 aa12.82□□□□□ -0.36
SNCAIP-201ENST00000261367 ZCCHC6Q5VYS8 1495 aaKnown RBP12.82□□□□□ -0.36
SNCAIP-201ENST00000261367 PCGF6Q9BYE7 350 aa12.77□□□□□ -0.36
SNCAIP-201ENST00000261367 SHROOM4Q9ULL8 1493 aa12.76□□□□□ -0.37
SNCAIP-201ENST00000261367 SUPT5HO00267 1087 aaKnown RBP12.74□□□□□ -0.37
SNCAIP-201ENST00000261367 YTHDC1Q96MU7 727 aaKnown RBP12.52□□□□□ -0.4
SNCAIP-201ENST00000261367 NEFLP07196 543 aa12.49□□□□□ -0.41
SNCAIP-201ENST00000261367 TRIM26Q12899 539 aaPredicted RBP12.49□□□□□ -0.41
SNCAIP-201ENST00000261367 DCAF1Q9Y4B6 1507 aa12.46□□□□□ -0.41
SNCAIP-201ENST00000261367 DCAF8L2P0C7V8 631 aa12.4□□□□□ -0.42
SNCAIP-201ENST00000261367 CLSPNQ9HAW4 1339 aa12.32□□□□□ -0.44
SNCAIP-201ENST00000261367 APLP2Q06481 763 aa12.31□□□□□ -0.44
SNCAIP-201ENST00000261367 MYT1LQ9UL68 1186 aa12.28□□□□□ -0.44
SNCAIP-201ENST00000261367 ACIN1Q9UKV3 1341 aaKnown RBP12.18□□□□□ -0.46
SNCAIP-201ENST00000261367 MYO15BQ96JP2 1530 aa12.15□□□□□ -0.46
SNCAIP-201ENST00000261367 RTL5Q5HYW3 569 aaPredicted RBP12.15□□□□□ -0.47
SNCAIP-201ENST00000261367 GTF3C3Q9Y5Q9 886 aa12.14□□□□□ -0.47
SNCAIP-201ENST00000261367 DIEXFQ68CQ4 756 aaKnown RBP12.11□□□□□ -0.47
SNCAIP-201ENST00000261367 ABCC9O60706 1549 aa12.09□□□□□ -0.47
SNCAIP-201ENST00000261367 PPARGC1BQ86YN6 1023 aaKnown RBP12.08□□□□□ -0.48
SNCAIP-201ENST00000261367 SCRIBQ14160 1630 aa12.03□□□□□ -0.48
SNCAIP-201ENST00000261367 CHIC1Q5VXU3 224 aa12.03□□□□□ -0.48
SNCAIP-201ENST00000261367 DAXXQ9UER7 740 aaPredicted RBP12.01□□□□□ -0.49
SNCAIP-201ENST00000261367 GLIPR1L2Q4G1C9 344 aa12□□□□□ -0.49
SNCAIP-201ENST00000261367 TRIM41Q8WV44 630 aa11.99□□□□□ -0.49
SNCAIP-201ENST00000261367 LOC105371045A0A1W2PR82 267 aa11.95□□□□□ -0.5
SNCAIP-201ENST00000261367 RSF1Q96T23 1441 aaPredicted RBP11.91□□□□□ -0.5
SNCAIP-201ENST00000261367 NACADO15069 1562 aa11.9□□□□□ -0.5
SNCAIP-201ENST00000261367 SCAF1Q9H7N4 1312 aaKnown RBP11.88□□□□□ -0.51
SNCAIP-201ENST00000261367 FAM9AQ8IZU1 332 aaPredicted RBP11.88□□□□□ -0.51
SNCAIP-201ENST00000261367 CDK11AQ9UQ88 783 aaPredicted RBP11.88□□□□□ -0.51
SNCAIP-201ENST00000261367 EHMT2Q96KQ7 1210 aa11.86□□□□□ -0.51
SNCAIP-201ENST00000261367 UNC13AQ9UPW8 1703 aa11.86□□□□□ -0.51
SNCAIP-201ENST00000261367 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
SNCAIP-201ENST00000261367 ANP32EQ9BTT0 268 aa11.82□□□□□ -0.52
SNCAIP-201ENST00000261367 CECR2Q9BXF3 1484 aa11.82□□□□□ -0.52
SNCAIP-201ENST00000261367 ZNF316A6NFI3 1004 aaPredicted RBP11.82□□□□□ -0.52
SNCAIP-201ENST00000261367 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
SNCAIP-201ENST00000261367 WIZO95785 1651 aa11.75□□□□□ -0.53
SNCAIP-201ENST00000261367 EIF4G1Q04637 1599 aaKnown RBP11.73□□□□□ -0.53
SNCAIP-201ENST00000261367 BCL11AQ9H165 835 aa11.71□□□□□ -0.53
SNCAIP-201ENST00000261367 ANP32AP39687 249 aaKnown RBP11.69□□□□□ -0.54
SNCAIP-201ENST00000261367 NEUROD1Q13562 356 aa11.69□□□□□ -0.54
SNCAIP-201ENST00000261367 UBTFP17480 764 aaKnown RBP11.65□□□□□ -0.54
SNCAIP-201ENST00000261367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.64□□□□□ -0.55
SNCAIP-201ENST00000261367 BAZ1AQ9NRL2 1556 aaPredicted RBP11.64□□□□□ -0.55
SNCAIP-201ENST00000261367 BICRAQ9NZM4 1560 aa11.62□□□□□ -0.55
SNCAIP-201ENST00000261367 EIF5BO60841 1220 aaKnown RBP11.59□□□□□ -0.55
SNCAIP-201ENST00000261367 SMARCA4P51532 1647 aa11.57□□□□□ -0.56
SNCAIP-201ENST00000261367 ANP32CO43423 234 aa11.56□□□□□ -0.56
SNCAIP-201ENST00000261367 BCANQ96GW7 911 aa11.53□□□□□ -0.56
SNCAIP-201ENST00000261367 ERICH6BQ5W0A0 696 aa11.49□□□□□ -0.57
SNCAIP-201ENST00000261367 SMARCA2P51531 1590 aa11.49□□□□□ -0.57
SNCAIP-201ENST00000261367 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
SNCAIP-201ENST00000261367 FKBP8Q14318 412 aa11.45□□□□□ -0.58
SNCAIP-201ENST00000261367 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
SNCAIP-201ENST00000261367 ZBTB47Q9UFB7 747 aaPredicted RBP11.44□□□□□ -0.58
SNCAIP-201ENST00000261367 PEG3Q9GZU2 1588 aa11.44□□□□□ -0.58
SNCAIP-201ENST00000261367 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
SNCAIP-201ENST00000261367 ANP32BQ92688 251 aaKnown RBP11.42□□□□□ -0.58
SNCAIP-201ENST00000261367 ABCC8Q09428 1581 aa11.38□□□□□ -0.59
SNCAIP-201ENST00000261367 PPM1GO15355 546 aaPredicted RBP11.36□□□□□ -0.59
SNCAIP-201ENST00000261367 DDRGK1Q96HY6 314 aa11.36□□□□□ -0.59
SNCAIP-201ENST00000261367 TNNT2P45379 298 aaPredicted RBP11.34□□□□□ -0.59
SNCAIP-201ENST00000261367 NCLP19338 710 aaKnown RBP11.33□□□□□ -0.6
SNCAIP-201ENST00000261367 NBR1Q14596 966 aa11.28□□□□□ -0.6
SNCAIP-201ENST00000261367 SUPT16HQ9Y5B9 1047 aaKnown RBP11.27□□□□□ -0.61
SNCAIP-201ENST00000261367 PABPN1Q86U42 306 aaKnown RBP eCLIP11.26□□□□□ -0.61
SNCAIP-201ENST00000261367 MIER1Q8N108 512 aa11.26□□□□□ -0.61
SNCAIP-201ENST00000261367 DEKP35659 375 aaKnown RBP11.25□□□□□ -0.61
SNCAIP-201ENST00000261367 TRIM44Q96DX7 344 aaPredicted RBP11.25□□□□□ -0.61
SNCAIP-201ENST00000261367 NOP58Q9Y2X3 529 aaKnown RBP11.25□□□□□ -0.61
SNCAIP-201ENST00000261367 RUSC2Q8N2Y8 1516 aa11.24□□□□□ -0.61
SNCAIP-201ENST00000261367 ATAD2BQ9ULI0 1458 aa11.23□□□□□ -0.61
SNCAIP-201ENST00000261367 NEFMP07197 916 aa11.22□□□□□ -0.61
SNCAIP-201ENST00000261367 RANGAP1P46060 587 aaPredicted RBP11.22□□□□□ -0.61
SNCAIP-201ENST00000261367 UPF2Q9HAU5 1272 aaKnown RBP11.22□□□□□ -0.61
SNCAIP-201ENST00000261367 SYNJ1O43426 1573 aa11.21□□□□□ -0.61
SNCAIP-201ENST00000261367 CSRNP3Q8WYN3 585 aa11.21□□□□□ -0.61
SNCAIP-201ENST00000261367 SOGA1O94964 1423 aa11.21□□□□□ -0.62
SNCAIP-201ENST00000261367 ATP1B4Q9UN42 357 aaPredicted RBP11.19□□□□□ -0.62
SNCAIP-201ENST00000261367 NPM2Q86SE8 214 aaKnown RBP11.18□□□□□ -0.62
SNCAIP-201ENST00000261367 CCDC136Q96JN2 1154 aa11.18□□□□□ -0.62
SNCAIP-201ENST00000261367 RSPH6AQ9H0K4 717 aa11.16□□□□□ -0.62
SNCAIP-201ENST00000261367 PPP4R2Q9NY27 417 aa11.16□□□□□ -0.62
SNCAIP-201ENST00000261367 RBM19Q9Y4C8 960 aaKnown RBP11.15□□□□□ -0.62
SNCAIP-201ENST00000261367 ITGAEP38570 1179 aa11.15□□□□□ -0.62
SNCAIP-201ENST00000261367 HNRNPUQ00839 825 aaKnown RBP eCLIP11.14□□□□□ -0.63
SNCAIP-201ENST00000261367 BECN1Q14457 450 aa11.14□□□□□ -0.63
SNCAIP-201ENST00000261367 L1TD1Q5T7N2 865 aaKnown RBP11.14□□□□□ -0.63
SNCAIP-201ENST00000261367 TSHZ2Q9NRE2 1034 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms