RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 RAPGEF2Q9Y4G8 1499 aa20.32■□□□□ 0.84
SHTN1-201ENST00000260777 MORC1Q86VD1 984 aa20.32■□□□□ 0.84
SHTN1-201ENST00000260777 ROCK2O75116 1388 aaKnown RBP20.31■□□□□ 0.84
SHTN1-201ENST00000260777 ANKRD30AQ9BXX3 1397 aa20.3■□□□□ 0.84
SHTN1-201ENST00000260777 ZRSR1Q15695 479 aaKnown RBP20.3■□□□□ 0.84
SHTN1-201ENST00000260777 DNTTIP2Q5QJE6 756 aaKnown RBP20.29■□□□□ 0.84
SHTN1-201ENST00000260777 CARMIL2Q6F5E8 1435 aa20.28■□□□□ 0.84
SHTN1-201ENST00000260777 CFAP44Q96MT7 982 aa20.27■□□□□ 0.84
SHTN1-201ENST00000260777 NUP155O75694 1391 aa20.27■□□□□ 0.83
SHTN1-201ENST00000260777 L3MBTL2Q969R5 705 aa20.26■□□□□ 0.83
SHTN1-201ENST00000260777 FHOD3Q2V2M9 1422 aa20.22■□□□□ 0.83
SHTN1-201ENST00000260777 PDE3BQ13370 1112 aa20.22■□□□□ 0.83
SHTN1-201ENST00000260777 PDS5BQ9NTI5 1447 aa20.22■□□□□ 0.83
SHTN1-201ENST00000260777 HAP1P54257 671 aaPredicted RBP20.21■□□□□ 0.83
SHTN1-201ENST00000260777 ARID4BQ4LE39 1312 aaPredicted RBP20.21■□□□□ 0.83
SHTN1-201ENST00000260777 IPO9Q96P70 1041 aaKnown RBP20.2■□□□□ 0.82
SHTN1-201ENST00000260777 IPO8O15397 1037 aaKnown RBP20.2■□□□□ 0.82
SHTN1-201ENST00000260777 SRPK2P78362 688 aaKnown RBP20.2■□□□□ 0.82
SHTN1-201ENST00000260777 PLEKHG5O94827 1062 aa20.19■□□□□ 0.82
SHTN1-201ENST00000260777 TDRD9Q8NDG6 1382 aaKnown RBP20.19■□□□□ 0.82
SHTN1-201ENST00000260777 RWDD1Q9H446 243 aaPredicted RBP20.18■□□□□ 0.82
SHTN1-201ENST00000260777 NLRP13Q86W25 1043 aa20.18■□□□□ 0.82
SHTN1-201ENST00000260777 CDK11BP21127 795 aaKnown RBP20.17■□□□□ 0.82
SHTN1-201ENST00000260777 TPRNQ4KMQ1 711 aa20.17■□□□□ 0.82
SHTN1-201ENST00000260777 CCDC18Q5T9S5 1454 aa20.17■□□□□ 0.82
SHTN1-201ENST00000260777 EIF3AQ14152 1382 aaKnown RBP20.17■□□□□ 0.82
SHTN1-201ENST00000260777 OS9Q13438 667 aaPredicted RBP20.16■□□□□ 0.82
SHTN1-201ENST00000260777 MCCP23508 829 aa20.16■□□□□ 0.82
SHTN1-201ENST00000260777 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
SHTN1-201ENST00000260777 PTMSP20962 102 aa20.16■□□□□ 0.82
SHTN1-201ENST00000260777 RUSC2Q8N2Y8 1516 aa20.15■□□□□ 0.82
SHTN1-201ENST00000260777 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
SHTN1-201ENST00000260777 PMFBP1Q8TBY8 1022 aa20.14■□□□□ 0.81
SHTN1-201ENST00000260777 KIF15Q9NS87 1388 aa20.13■□□□□ 0.81
SHTN1-201ENST00000260777 PLCB2Q00722 1185 aa20.13■□□□□ 0.81
SHTN1-201ENST00000260777 CADPSQ9ULU8 1353 aa20.13■□□□□ 0.81
SHTN1-201ENST00000260777 GOLGA2Q08379 1002 aa20.13■□□□□ 0.81
SHTN1-201ENST00000260777 A0A0G2JS52 829 aa20.12■□□□□ 0.81
SHTN1-201ENST00000260777 GOLGA6L6A8MZA4 724 aa20.12■□□□□ 0.81
SHTN1-201ENST00000260777 HDGFP51858 240 aaKnown RBP20.12■□□□□ 0.81
SHTN1-201ENST00000260777 CALD1Q05682 793 aaKnown RBP20.12■□□□□ 0.81
SHTN1-201ENST00000260777 HDGFL2Q7Z4V5 671 aaPredicted RBP20.12■□□□□ 0.81
SHTN1-201ENST00000260777 SPRYD3Q8NCJ5 442 aa20.12■□□□□ 0.81
SHTN1-201ENST00000260777 MSNP26038 577 aaKnown RBP20.11■□□□□ 0.81
SHTN1-201ENST00000260777 GBP4Q96PP9 640 aa20.11■□□□□ 0.81
SHTN1-201ENST00000260777 KCNJ4P48050 445 aa20.11■□□□□ 0.81
SHTN1-201ENST00000260777 ATAD2BQ9ULI0 1458 aa20.1■□□□□ 0.81
SHTN1-201ENST00000260777 RSPH4AQ5TD94 716 aa20.1■□□□□ 0.81
SHTN1-201ENST00000260777 U2AF1L5P0DN76 240 aaPredicted RBP20.09■□□□□ 0.81
SHTN1-201ENST00000260777 U2AF1Q01081 240 aaKnown RBP eCLIP20.09■□□□□ 0.816e-8■■■■■ 27.5
SHTN1-201ENST00000260777 EFCAB2Q5VUJ9 269 aa20.09■□□□□ 0.81
SHTN1-201ENST00000260777 MYBBP1AQ9BQG0 1328 aaKnown RBP20.09■□□□□ 0.81
SHTN1-201ENST00000260777 FGD1P98174 961 aa20.08■□□□□ 0.8
SHTN1-201ENST00000260777 ITPRIPQ8IWB1 547 aa20.07■□□□□ 0.8
SHTN1-201ENST00000260777 SAFB2Q14151 953 aaKnown RBP eCLIP20.06■□□□□ 0.8
SHTN1-201ENST00000260777 ZBED9Q6R2W3 1325 aa20.06■□□□□ 0.8
SHTN1-201ENST00000260777 GOLGA6L4A6NEF3 574 aa20.06■□□□□ 0.8
SHTN1-201ENST00000260777 PRKRIP1Q9H875 184 aaPredicted RBP20.06■□□□□ 0.8
SHTN1-201ENST00000260777 NRDCO43847 1150 aa20.05■□□□□ 0.8
SHTN1-201ENST00000260777 SLKQ9H2G2 1235 aaPredicted RBP20.04■□□□□ 0.8
SHTN1-201ENST00000260777 RTF1Q92541 710 aaKnown RBP20.03■□□□□ 0.8
SHTN1-201ENST00000260777 CHAF1AQ13111 956 aaPredicted RBP20.03■□□□□ 0.8
SHTN1-201ENST00000260777 GGT6Q6P531 493 aa20.03■□□□□ 0.8
SHTN1-201ENST00000260777 CENPJQ9HC77 1338 aaPredicted RBP20.02■□□□□ 0.79
SHTN1-201ENST00000260777 STK26Q9P289 416 aa20■□□□□ 0.79
SHTN1-201ENST00000260777 HNRNPMP52272 730 aaKnown RBP eCLIP20■□□□□ 0.79
SHTN1-201ENST00000260777 USP35Q9P2H5 1018 aa20■□□□□ 0.79
SHTN1-201ENST00000260777 LMOD2Q6P5Q4 547 aa19.99■□□□□ 0.79
SHTN1-201ENST00000260777 SMC4Q9NTJ3 1288 aa19.98■□□□□ 0.79
SHTN1-201ENST00000260777 ST20-MTHFSA0A0A6YYL1 179 aa19.97■□□□□ 0.79
SHTN1-201ENST00000260777 CENPQQ7L2Z9 268 aaPredicted RBP19.96■□□□□ 0.79
SHTN1-201ENST00000260777 FANCIQ9NVI1 1328 aa19.96■□□□□ 0.79
SHTN1-201ENST00000260777 MFAP1P55081 439 aaKnown RBP19.96■□□□□ 0.79
SHTN1-201ENST00000260777 CCDC146Q8IYE0 955 aa19.96■□□□□ 0.79
SHTN1-201ENST00000260777 GOLGA6L3A6NEY3 463 aa19.95■□□□□ 0.78
SHTN1-201ENST00000260777 CCDC144AA2RUR9 1427 aa19.95■□□□□ 0.78
SHTN1-201ENST00000260777 RRP1P56182 461 aaKnown RBP19.95■□□□□ 0.78
SHTN1-201ENST00000260777 NAP1L2Q9ULW6 460 aaPredicted RBP19.95■□□□□ 0.78
SHTN1-201ENST00000260777 GZF1Q9H116 711 aaPredicted RBP19.94■□□□□ 0.78
SHTN1-201ENST00000260777 USP47Q96K76 1375 aa19.94■□□□□ 0.78
SHTN1-201ENST00000260777 KIAA1211Q6ZU35 1233 aa19.94■□□□□ 0.78
SHTN1-201ENST00000260777 TERF2IPQ9NYB0 399 aa19.94■□□□□ 0.78
SHTN1-201ENST00000260777 SOX12O15370 315 aa19.93■□□□□ 0.78
SHTN1-201ENST00000260777 APBB1O00213 710 aa19.93■□□□□ 0.78
SHTN1-201ENST00000260777 PDE4AP27815 886 aa19.93■□□□□ 0.78
SHTN1-201ENST00000260777 KIF3BO15066 747 aa19.92■□□□□ 0.78
SHTN1-201ENST00000260777 PANK3Q9H999 370 aa19.92■□□□□ 0.78
SHTN1-201ENST00000260777 SYAP1Q96A49 352 aaPredicted RBP19.91■□□□□ 0.78
SHTN1-201ENST00000260777 FAM161AQ3B820 660 aa19.9■□□□□ 0.78
SHTN1-201ENST00000260777 KIF21BO75037 1637 aa19.9■□□□□ 0.78
SHTN1-201ENST00000260777 SPAG9O60271 1321 aaKnown RBP19.9■□□□□ 0.78
SHTN1-201ENST00000260777 DRC7Q8IY82 874 aa19.89■□□□□ 0.77
SHTN1-201ENST00000260777 CHMP4AQ9BY43 222 aa19.89■□□□□ 0.77
SHTN1-201ENST00000260777 CLUAP1Q96AJ1 413 aa19.89■□□□□ 0.77
SHTN1-201ENST00000260777 EXOC6Q8TAG9 804 aa19.88■□□□□ 0.77
SHTN1-201ENST00000260777 HMMRO75330 724 aa19.88■□□□□ 0.77
SHTN1-201ENST00000260777 MLECQ14165 292 aa19.87■□□□□ 0.77
SHTN1-201ENST00000260777 KIAA2012Q0VF49 1180 aa19.87■□□□□ 0.77
SHTN1-201ENST00000260777 E9PSI1 815 aa19.87■□□□□ 0.77
SHTN1-201ENST00000260777 LMOD3Q0VAK6 560 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms