RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 RAPGEF6Q8TEU7 1601 aa25.48■■□□□ 1.67
RABEPK-201ENST00000259460 MED1Q15648 1581 aaPredicted RBP25.48■■□□□ 1.67
RABEPK-201ENST00000259460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.43■■□□□ 1.66
RABEPK-201ENST00000259460 HNRNPUL2Q1KMD3 747 aaKnown RBP25.43■■□□□ 1.66
RABEPK-201ENST00000259460 FAM9AQ8IZU1 332 aaPredicted RBP25.43■■□□□ 1.66
RABEPK-201ENST00000259460 SETD1BQ9UPS6 1966 aaKnown RBP25.4■■□□□ 1.66
RABEPK-201ENST00000259460 C9orf84Q5VXU9 1444 aa25.4■■□□□ 1.66
RABEPK-201ENST00000259460 P3H3Q8IVL6 736 aa25.39■■□□□ 1.66
RABEPK-201ENST00000259460 UBAP1LF5GYI3 381 aa25.38■■□□□ 1.65
RABEPK-201ENST00000259460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.37■■□□□ 1.65
RABEPK-201ENST00000259460 C3P01024 1663 aa25.37■■□□□ 1.65
RABEPK-201ENST00000259460 ATP10AO60312 1499 aa25.36■■□□□ 1.65
RABEPK-201ENST00000259460 NCOA1Q15788 1441 aa25.34■■□□□ 1.65
RABEPK-201ENST00000259460 NUP153P49790 1475 aaKnown RBP25.34■■□□□ 1.65
RABEPK-201ENST00000259460 SAMD9Q5K651 1589 aa25.3■■□□□ 1.64
RABEPK-201ENST00000259460 SCAPERQ9BY12 1400 aa25.27■■□□□ 1.64
RABEPK-201ENST00000259460 ZNF335Q9H4Z2 1342 aaPredicted RBP25.24■■□□□ 1.63
RABEPK-201ENST00000259460 CAMSAP1Q5T5Y3 1602 aa25.24■■□□□ 1.63
RABEPK-201ENST00000259460 PHF23Q9BUL5 403 aaPredicted RBP25.2■■□□□ 1.62
RABEPK-201ENST00000259460 PRXQ9BXM0 1461 aa25.19■■□□□ 1.62
RABEPK-201ENST00000259460 PLEKHD1A6NEE1 506 aa25.19■■□□□ 1.62
RABEPK-201ENST00000259460 HSPA1LP34931 641 aa25.19■■□□□ 1.62
RABEPK-201ENST00000259460 SCAF1Q9H7N4 1312 aaKnown RBP25.18■■□□□ 1.62
RABEPK-201ENST00000259460 TRAPPC8Q9Y2L5 1435 aa25.17■■□□□ 1.62
RABEPK-201ENST00000259460 DIP2CQ9Y2E4 1556 aa25.15■■□□□ 1.62
RABEPK-201ENST00000259460 REREQ9P2R6 1566 aa25.12■■□□□ 1.61
RABEPK-201ENST00000259460 MYO5CQ9NQX4 1742 aa25.11■■□□□ 1.61
RABEPK-201ENST00000259460 PLCH2O75038 1416 aa25.11■■□□□ 1.61
RABEPK-201ENST00000259460 KDM5CP41229 1560 aa25.1■■□□□ 1.61
RABEPK-201ENST00000259460 ABCA6Q8N139 1617 aa25.1■■□□□ 1.61
RABEPK-201ENST00000259460 ZNF518AQ6AHZ1 1483 aa25.1■■□□□ 1.61
RABEPK-201ENST00000259460 NCKAP5LQ9HCH0 1330 aa25.09■■□□□ 1.61
RABEPK-201ENST00000259460 PIP4K2BP78356 416 aa25.09■■□□□ 1.61
RABEPK-201ENST00000259460 SUPT6HQ7KZ85 1726 aaKnown RBP25.08■■□□□ 1.61
RABEPK-201ENST00000259460 ESF1Q9H501 851 aaKnown RBP25.08■■□□□ 1.6
RABEPK-201ENST00000259460 AGLP35573 1532 aa25.05■■□□□ 1.6
RABEPK-201ENST00000259460 ZNF142P52746 1687 aaPredicted RBP25.04■■□□□ 1.6
RABEPK-201ENST00000259460 MYT1LQ9UL68 1186 aa25.02■■□□□ 1.6
RABEPK-201ENST00000259460 MYO3AQ8NEV4 1616 aa25.01■■□□□ 1.59
RABEPK-201ENST00000259460 CDK13Q14004 1512 aaKnown RBP25.01■■□□□ 1.59
RABEPK-201ENST00000259460 MROH2AA6NES4 1674 aa25.01■■□□□ 1.59
RABEPK-201ENST00000259460 PLA2R1Q13018 1463 aa25■■□□□ 1.59
RABEPK-201ENST00000259460 CNTLNQ9NXG0 1405 aa25■■□□□ 1.59
RABEPK-201ENST00000259460 NPATQ14207 1427 aa24.99■■□□□ 1.59
RABEPK-201ENST00000259460 TCOF1Q13428 1488 aaKnown RBP24.98■■□□□ 1.59
RABEPK-201ENST00000259460 EFCAB2Q5VUJ9 269 aa24.96■■□□□ 1.59
RABEPK-201ENST00000259460 TOM1O60784 492 aa24.95■■□□□ 1.58
RABEPK-201ENST00000259460 AFAP1Q8N556 730 aa24.95■■□□□ 1.58
RABEPK-201ENST00000259460 CEP170BQ9Y4F5 1589 aaPredicted RBP24.95■■□□□ 1.58
RABEPK-201ENST00000259460 PKD2Q13563 968 aa24.94■■□□□ 1.58
RABEPK-201ENST00000259460 ARHGAP5Q13017 1502 aa24.93■■□□□ 1.58
RABEPK-201ENST00000259460 PPP6R1Q9UPN7 881 aa24.92■■□□□ 1.58
RABEPK-201ENST00000259460 CPS1P31327 1500 aa24.92■■□□□ 1.58
RABEPK-201ENST00000259460 RANGAP1P46060 587 aaPredicted RBP24.9■■□□□ 1.58
RABEPK-201ENST00000259460 KIF14Q15058 1648 aa24.9■■□□□ 1.58
RABEPK-201ENST00000259460 MLH3Q9UHC1 1453 aa24.9■■□□□ 1.58
RABEPK-201ENST00000259460 ALKQ9UM73 1620 aa24.86■■□□□ 1.57
RABEPK-201ENST00000259460 CLTCQ00610 1675 aaKnown RBP24.85■■□□□ 1.57
RABEPK-201ENST00000259460 POLR1AO95602 1720 aaPredicted RBP24.84■■□□□ 1.57
RABEPK-201ENST00000259460 SENP3Q9H4L4 574 aaPredicted RBP24.83■■□□□ 1.56
RABEPK-201ENST00000259460 ZMYM3Q14202 1370 aa24.82■■□□□ 1.56
RABEPK-201ENST00000259460 KIDINS220Q9ULH0 1771 aa24.82■■□□□ 1.56
RABEPK-201ENST00000259460 ITSN2Q9NZM3 1697 aa24.82■■□□□ 1.56
RABEPK-201ENST00000259460 PTPRKQ15262 1439 aa24.81■■□□□ 1.56
RABEPK-201ENST00000259460 SHANK2Q9UPX8 1470 aa24.8■■□□□ 1.56
RABEPK-201ENST00000259460 RGS17Q9UGC6 210 aaPredicted RBP24.79■■□□□ 1.56
RABEPK-201ENST00000259460 ABCC1P33527 1531 aa24.79■■□□□ 1.56
RABEPK-201ENST00000259460 CDC42BPBQ9Y5S2 1711 aa24.77■■□□□ 1.56
RABEPK-201ENST00000259460 NEURL4Q96JN8 1562 aa24.77■■□□□ 1.56
RABEPK-201ENST00000259460 SETD1AO15047 1707 aaKnown RBP24.74■■□□□ 1.55
RABEPK-201ENST00000259460 DNMT1P26358 1616 aaKnown RBP24.73■■□□□ 1.55
RABEPK-201ENST00000259460 PREX2Q70Z35 1606 aa24.71■■□□□ 1.55
RABEPK-201ENST00000259460 VWDEQ8N2E2 1590 aa24.71■■□□□ 1.55
RABEPK-201ENST00000259460 A2ML1A8K2U0 1454 aa24.7■■□□□ 1.54
RABEPK-201ENST00000259460 RNF17Q9BXT8 1623 aaKnown RBP24.68■■□□□ 1.54
RABEPK-201ENST00000259460 TROQ12816 1431 aaPredicted RBP24.66■■□□□ 1.54
RABEPK-201ENST00000259460 CLIP1P30622 1438 aa24.63■■□□□ 1.53
RABEPK-201ENST00000259460 ATP1B4Q9UN42 357 aaPredicted RBP24.62■■□□□ 1.53
RABEPK-201ENST00000259460 SAMD9LQ8IVG5 1584 aa24.62■■□□□ 1.53
RABEPK-201ENST00000259460 CDK11AQ9UQ88 783 aaPredicted RBP24.61■■□□□ 1.53
RABEPK-201ENST00000259460 POTEAQ6S8J7 498 aa24.61■■□□□ 1.53
RABEPK-201ENST00000259460 PLXNC1O60486 1568 aa24.6■■□□□ 1.53
RABEPK-201ENST00000259460 SYNMO15061 1565 aa24.59■■□□□ 1.53
RABEPK-201ENST00000259460 STRCP1A6NGW2 1772 aa24.58■■□□□ 1.53
RABEPK-201ENST00000259460 CSRNP3Q8WYN3 585 aa24.58■■□□□ 1.52
RABEPK-201ENST00000259460 LRRIQ1Q96JM4 1722 aa24.55■■□□□ 1.52
RABEPK-201ENST00000259460 LRRC7Q96NW7 1537 aa24.54■■□□□ 1.52
RABEPK-201ENST00000259460 CDC42BPAQ5VT25 1732 aa24.52■■□□□ 1.52
RABEPK-201ENST00000259460 IQGAP1P46940 1657 aa24.52■■□□□ 1.52
RABEPK-201ENST00000259460 ATP7AQ04656 1500 aa24.52■■□□□ 1.52
RABEPK-201ENST00000259460 SYCP2Q9BX26 1530 aa24.51■■□□□ 1.51
RABEPK-201ENST00000259460 NPHP4O75161 1426 aaPredicted RBP24.5■■□□□ 1.51
RABEPK-201ENST00000259460 FMN1Q68DA7 1419 aa24.5■■□□□ 1.51
RABEPK-201ENST00000259460 DEPDC5O75140 1603 aa24.5■■□□□ 1.51
RABEPK-201ENST00000259460 INO80Q9ULG1 1556 aaPredicted RBP24.5■■□□□ 1.51
RABEPK-201ENST00000259460 A2MP01023 1474 aa24.5■■□□□ 1.51
RABEPK-201ENST00000259460 GGT6Q6P531 493 aa24.49■■□□□ 1.51
RABEPK-201ENST00000259460 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.47■■□□□ 1.51
RABEPK-201ENST00000259460 SPAG9O60271 1321 aaKnown RBP24.46■■□□□ 1.51
RABEPK-201ENST00000259460 MED14O60244 1454 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms