RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 CHD1O14646 1710 aa23.6■■□□□ 1.37
CDK4-201ENST00000257904 HSPA5P11021 654 aaKnown RBP23.6■■□□□ 1.37
CDK4-201ENST00000257904 RRP7BPQ9NSQ0 103 aa23.6■■□□□ 1.37
CDK4-201ENST00000257904 ARID3CA6NKF2 412 aa23.58■■□□□ 1.36
CDK4-201ENST00000257904 CARMIL2Q6F5E8 1435 aa23.57■■□□□ 1.36
CDK4-201ENST00000257904 CDK13Q14004 1512 aaKnown RBP23.56■■□□□ 1.36
CDK4-201ENST00000257904 KDM6BO15054 1643 aa23.55■■□□□ 1.36
CDK4-201ENST00000257904 CHIC2Q9UKJ5 165 aa23.55■■□□□ 1.36
CDK4-201ENST00000257904 EIF4G2P78344 907 aaKnown RBP eCLIP23.53■■□□□ 1.36
CDK4-201ENST00000257904 CNTLNQ9NXG0 1405 aa23.52■■□□□ 1.36
CDK4-201ENST00000257904 MIA2Q96PC5 1412 aa23.51■■□□□ 1.35
CDK4-201ENST00000257904 RAPGEF6Q8TEU7 1601 aa23.49■■□□□ 1.35
CDK4-201ENST00000257904 MPHOSPH9Q99550 1183 aa23.48■■□□□ 1.35
CDK4-201ENST00000257904 NUP153P49790 1475 aaKnown RBP23.47■■□□□ 1.35
CDK4-201ENST00000257904 NCOA1Q15788 1441 aa23.45■■□□□ 1.34
CDK4-201ENST00000257904 PRG4Q92954 1404 aaPredicted RBP23.45■■□□□ 1.34
CDK4-201ENST00000257904 L3MBTL2Q969R5 705 aa23.45■■□□□ 1.34
CDK4-201ENST00000257904 PLB1Q6P1J6 1458 aa23.42■■□□□ 1.34
CDK4-201ENST00000257904 CCDC7Q96M83 1385 aa23.42■■□□□ 1.34
CDK4-201ENST00000257904 IRX6P78412 446 aaPredicted RBP23.42■■□□□ 1.34
CDK4-201ENST00000257904 ERICH6BQ5W0A0 696 aa23.42■■□□□ 1.34
CDK4-201ENST00000257904 SHROOM2Q13796 1616 aa23.4■■□□□ 1.34
CDK4-201ENST00000257904 CCDC184Q52MB2 194 aa23.4■■□□□ 1.34
CDK4-201ENST00000257904 CDK11AQ9UQ88 783 aaPredicted RBP23.4■■□□□ 1.34
CDK4-201ENST00000257904 PRKRIP1Q9H875 184 aaPredicted RBP23.39■■□□□ 1.34
CDK4-201ENST00000257904 RPRD2Q5VT52 1461 aaKnown RBP23.39■■□□□ 1.34
CDK4-201ENST00000257904 C11orf95C9JLR9 678 aaPredicted RBP23.39■■□□□ 1.33
CDK4-201ENST00000257904 ROCK1Q13464 1354 aa23.38■■□□□ 1.33
CDK4-201ENST00000257904 FANCIQ9NVI1 1328 aa23.37■■□□□ 1.33
CDK4-201ENST00000257904 ANKRD30BQ9BXX2 1392 aa23.37■■□□□ 1.33
CDK4-201ENST00000257904 MSH5O43196 834 aa23.37■■□□□ 1.33
CDK4-201ENST00000257904 FOXD1Q16676 465 aa23.37■■□□□ 1.33
CDK4-201ENST00000257904 TEX14Q8IWB6 1497 aa23.36■■□□□ 1.33
CDK4-201ENST00000257904 DAPK1P53355 1430 aa23.36■■□□□ 1.33
CDK4-201ENST00000257904 ABCA8O94911 1581 aa23.35■■□□□ 1.33
CDK4-201ENST00000257904 CLASP1Q7Z460 1538 aa23.33■■□□□ 1.33
CDK4-201ENST00000257904 PTPRGP23470 1445 aa23.33■■□□□ 1.32
CDK4-201ENST00000257904 NBPF8Q3BBV2 869 aa23.32■■□□□ 1.32
CDK4-201ENST00000257904 PPP4R2Q9NY27 417 aa23.32■■□□□ 1.32
CDK4-201ENST00000257904 DNMT1P26358 1616 aaKnown RBP23.32■■□□□ 1.32
CDK4-201ENST00000257904 ZBED9Q6R2W3 1325 aa23.31■■□□□ 1.32
CDK4-201ENST00000257904 SPATA31E1Q6ZUB1 1445 aa23.31■■□□□ 1.32
CDK4-201ENST00000257904 POLR1AO95602 1720 aaPredicted RBP23.31■■□□□ 1.32
CDK4-201ENST00000257904 MRS2Q9HD23 443 aa23.31■■□□□ 1.32
CDK4-201ENST00000257904 ABCC5O15440 1437 aa23.3■■□□□ 1.32
CDK4-201ENST00000257904 FAM9BQ8IZU0 186 aa23.29■■□□□ 1.32
CDK4-201ENST00000257904 TROQ12816 1431 aaPredicted RBP23.27■■□□□ 1.32
CDK4-201ENST00000257904 KIF7Q2M1P5 1343 aa23.27■■□□□ 1.32
CDK4-201ENST00000257904 ERCC6L2Q5T890 1561 aa23.26■■□□□ 1.31
CDK4-201ENST00000257904 ATP10BO94823 1461 aa23.23■■□□□ 1.31
CDK4-201ENST00000257904 SLC4A1APQ9BWU0 796 aaKnown RBP23.23■■□□□ 1.31
CDK4-201ENST00000257904 BCL11AQ9H165 835 aa23.2■■□□□ 1.3
CDK4-201ENST00000257904 ZNF644Q9H582 1327 aaPredicted RBP23.2■■□□□ 1.3
CDK4-201ENST00000257904 KIF14Q15058 1648 aa23.18■■□□□ 1.3
CDK4-201ENST00000257904 PZPP20742 1482 aa23.18■■□□□ 1.3
CDK4-201ENST00000257904 ADCY10Q96PN6 1610 aa23.18■■□□□ 1.3
CDK4-201ENST00000257904 MBD5Q9P267 1494 aa23.16■■□□□ 1.3
CDK4-201ENST00000257904 PLEKHD1A6NEE1 506 aa23.16■■□□□ 1.3
CDK4-201ENST00000257904 B4GALNT3Q6L9W6 998 aa23.15■■□□□ 1.3
CDK4-201ENST00000257904 ITSN2Q9NZM3 1697 aa23.14■■□□□ 1.29
CDK4-201ENST00000257904 CFDP1Q9UEE9 299 aaPredicted RBP23.13■■□□□ 1.29
CDK4-201ENST00000257904 ERICH6Q7L0X2 663 aa23.13■■□□□ 1.29
CDK4-201ENST00000257904 DHX29Q7Z478 1369 aaKnown RBP23.13■■□□□ 1.29
CDK4-201ENST00000257904 GPATCH8Q9UKJ3 1502 aaKnown RBP23.12■■□□□ 1.29
CDK4-201ENST00000257904 SMG6Q86US8 1419 aaKnown RBP23.11■■□□□ 1.29
CDK4-201ENST00000257904 ADGBQ8N7X0 1667 aa23.11■■□□□ 1.29
CDK4-201ENST00000257904 CAMSAP2Q08AD1 1489 aa23.1■■□□□ 1.29
CDK4-201ENST00000257904 ABCC2Q92887 1545 aa23.1■■□□□ 1.29
CDK4-201ENST00000257904 ZNF777Q9ULD5 760 aaPredicted RBP23.09■■□□□ 1.29
CDK4-201ENST00000257904 KIAA1107Q9UPP5 1409 aa23.09■■□□□ 1.29
CDK4-201ENST00000257904 USP47Q96K76 1375 aa23.08■■□□□ 1.29
CDK4-201ENST00000257904 BCORL1Q5H9F3 1711 aa23.08■■□□□ 1.28
CDK4-201ENST00000257904 ADGRL2O95490 1459 aa23.06■■□□□ 1.28
CDK4-201ENST00000257904 OSCARQ8IYS5 282 aa23.05■■□□□ 1.28
CDK4-201ENST00000257904 ABCC10Q5T3U5 1492 aa23.04■■□□□ 1.28
CDK4-201ENST00000257904 KDM5CP41229 1560 aa23.04■■□□□ 1.28
CDK4-201ENST00000257904 CROCC2H7BZ55 1655 aa23.04■■□□□ 1.28
CDK4-201ENST00000257904 ARID4BQ4LE39 1312 aaPredicted RBP23.04■■□□□ 1.28
CDK4-201ENST00000257904 UHRF1BP1LA0JNW5 1464 aa23.03■■□□□ 1.28
CDK4-201ENST00000257904 CDC42BPAQ5VT25 1732 aa23.03■■□□□ 1.28
CDK4-201ENST00000257904 NUDCQ9Y266 331 aa23.02■■□□□ 1.28
CDK4-201ENST00000257904 RNF123Q5XPI4 1314 aa23.01■■□□□ 1.27
CDK4-201ENST00000257904 PKD2Q13563 968 aa22.98■■□□□ 1.27
CDK4-201ENST00000257904 UHRF1BP1Q6BDS2 1440 aa22.98■■□□□ 1.27
CDK4-201ENST00000257904 ZNF326Q5BKZ1 582 aaKnown RBP22.97■■□□□ 1.27
CDK4-201ENST00000257904 ANKRD30AQ9BXX3 1397 aa22.97■■□□□ 1.27
CDK4-201ENST00000257904 POLR3GLQ9BT43 218 aa22.96■■□□□ 1.27
CDK4-201ENST00000257904 ROCK2O75116 1388 aaKnown RBP22.96■■□□□ 1.27
CDK4-201ENST00000257904 RALGAPBQ86X10 1494 aa22.96■■□□□ 1.27
CDK4-201ENST00000257904 CNGB1Q14028 1251 aaPredicted RBP22.94■■□□□ 1.26
CDK4-201ENST00000257904 ANKRD50Q9ULJ7 1429 aa22.94■■□□□ 1.26
CDK4-201ENST00000257904 ZCCHC11Q5TAX3 1644 aaKnown RBP22.93■■□□□ 1.26
CDK4-201ENST00000257904 PNISRQ8TF01 805 aaKnown RBP22.93■■□□□ 1.26
CDK4-201ENST00000257904 MYT1LQ9UL68 1186 aa22.92■■□□□ 1.26
CDK4-201ENST00000257904 ARHGEF12Q9NZN5 1544 aa22.91■■□□□ 1.26
CDK4-201ENST00000257904 CCDC136Q96JN2 1154 aa22.88■■□□□ 1.25
CDK4-201ENST00000257904 TMC1Q8TDI8 760 aa22.88■■□□□ 1.25
CDK4-201ENST00000257904 KIF15Q9NS87 1388 aa22.88■■□□□ 1.25
CDK4-201ENST00000257904 SHANK2Q9UPX8 1470 aa22.88■■□□□ 1.25
CDK4-201ENST00000257904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.87■■□□□ 1.252e-6■■■■□ 26.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms