RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 CDC42BPAQ5VT25 1732 aa34.07■■■■□ 3.05
NXT1-201ENST00000254998 ADGRL1O94910 1474 aa34.06■■■■□ 3.04
NXT1-201ENST00000254998 GPATCH8Q9UKJ3 1502 aaKnown RBP34.05■■■■□ 3.04
NXT1-201ENST00000254998 LRRC9Q6ZRR7 1453 aa34.05■■■■□ 3.04
NXT1-201ENST00000254998 FRMPD1Q5SYB0 1578 aa34.05■■■■□ 3.04
NXT1-201ENST00000254998 RAPGEF3O95398 923 aa34.04■■■■□ 3.04
NXT1-201ENST00000254998 CCNB3Q8WWL7 1395 aa34.02■■■■□ 3.04
NXT1-201ENST00000254998 RICTORQ6R327 1708 aa34.01■■■■□ 3.04
NXT1-201ENST00000254998 SCAPERQ9BY12 1400 aa34.01■■■■□ 3.03
NXT1-201ENST00000254998 SUPT6HQ7KZ85 1726 aaKnown RBP33.99■■■■□ 3.03
NXT1-201ENST00000254998 POGZQ7Z3K3 1410 aa33.96■■■■□ 3.03
NXT1-201ENST00000254998 NCOA2Q15596 1464 aa33.96■■■■□ 3.03
NXT1-201ENST00000254998 APLP2Q06481 763 aa33.95■■■■□ 3.03
NXT1-201ENST00000254998 ZMYM4Q5VZL5 1548 aa33.94■■■■□ 3.02
NXT1-201ENST00000254998 KANK4Q5T7N3 995 aaPredicted RBP33.93■■■■□ 3.02
NXT1-201ENST00000254998 ABCC1P33527 1531 aa33.92■■■■□ 3.02
NXT1-201ENST00000254998 ITSN2Q9NZM3 1697 aa33.91■■■■□ 3.02
NXT1-201ENST00000254998 CFDP1Q9UEE9 299 aaPredicted RBP33.91■■■■□ 3.02
NXT1-201ENST00000254998 SAMD9LQ8IVG5 1584 aa33.88■■■■□ 3.01
NXT1-201ENST00000254998 ZNF518AQ6AHZ1 1483 aa33.88■■■■□ 3.01
NXT1-201ENST00000254998 MAGI2Q86UL8 1455 aa33.87■■■■□ 3.01
NXT1-201ENST00000254998 ARHGEF12Q9NZN5 1544 aa33.85■■■■□ 3.01
NXT1-201ENST00000254998 PLEKHH2Q8IVE3 1493 aa33.85■■■■□ 3.01
NXT1-201ENST00000254998 KDM5CP41229 1560 aa33.83■■■■□ 3.01
NXT1-201ENST00000254998 KIAA1107Q9UPP5 1409 aa33.83■■■■□ 3.01
NXT1-201ENST00000254998 ARHGEF40Q8TER5 1519 aa33.83■■■■□ 3.01
NXT1-201ENST00000254998 ZNF777Q9ULD5 760 aaPredicted RBP33.82■■■■□ 3
NXT1-201ENST00000254998 TRAPPC8Q9Y2L5 1435 aa33.79■■■■□ 3
NXT1-201ENST00000254998 ZFYVE16Q7Z3T8 1539 aa33.79■■■■□ 3
NXT1-201ENST00000254998 AFAP1Q8N556 730 aa33.78■■■■□ 3
NXT1-201ENST00000254998 SYCP2Q9BX26 1530 aa33.77■■■■□ 3
NXT1-201ENST00000254998 YEATS2Q9ULM3 1422 aa33.74■■■□□ 2.99
NXT1-201ENST00000254998 MLH3Q9UHC1 1453 aa33.73■■■□□ 2.99
NXT1-201ENST00000254998 ZNF644Q9H582 1327 aaPredicted RBP33.72■■■□□ 2.99
NXT1-201ENST00000254998 MYOM3Q5VTT5 1437 aa33.71■■■□□ 2.99
NXT1-201ENST00000254998 HECW2Q9P2P5 1572 aa33.71■■■□□ 2.99
NXT1-201ENST00000254998 HNRNPMP52272 730 aaKnown RBP eCLIP33.7■■■□□ 2.99
NXT1-201ENST00000254998 MIA2Q96PC5 1412 aa33.69■■■□□ 2.98
NXT1-201ENST00000254998 CAMSAP2Q08AD1 1489 aa33.68■■■□□ 2.98
NXT1-201ENST00000254998 MBD5Q9P267 1494 aa33.68■■■□□ 2.98
NXT1-201ENST00000254998 KDM4FA0A1W2PPD8 638 aa33.67■■■□□ 2.98
NXT1-201ENST00000254998 ATP10AO60312 1499 aa33.65■■■□□ 2.98
NXT1-201ENST00000254998 C9orf84Q5VXU9 1444 aa33.6■■■□□ 2.97
NXT1-201ENST00000254998 KIDINS220Q9ULH0 1771 aa33.6■■■□□ 2.97
NXT1-201ENST00000254998 DIP2CQ9Y2E4 1556 aa33.6■■■□□ 2.97
NXT1-201ENST00000254998 SPAG9O60271 1321 aaKnown RBP33.59■■■□□ 2.97
NXT1-201ENST00000254998 RSPH4AQ5TD94 716 aa33.58■■■□□ 2.97
NXT1-201ENST00000254998 ABCA6Q8N139 1617 aa33.57■■■□□ 2.97
NXT1-201ENST00000254998 ARHGEF5Q12774 1597 aa33.56■■■□□ 2.96
NXT1-201ENST00000254998 MYT1LQ9UL68 1186 aa33.56■■■□□ 2.96
NXT1-201ENST00000254998 CCDC141Q6ZP82 1450 aa33.56■■■□□ 2.96
NXT1-201ENST00000254998 REREQ9P2R6 1566 aa33.55■■■□□ 2.96
NXT1-201ENST00000254998 INO80Q9ULG1 1556 aaPredicted RBP33.55■■■□□ 2.96
NXT1-201ENST00000254998 ATP7AQ04656 1500 aa33.54■■■□□ 2.96
NXT1-201ENST00000254998 SIGLEC1Q9BZZ2 1709 aa33.53■■■□□ 2.96
NXT1-201ENST00000254998 FGD6Q6ZV73 1430 aa33.53■■■□□ 2.96
NXT1-201ENST00000254998 ARID4BQ4LE39 1312 aaPredicted RBP33.53■■■□□ 2.96
NXT1-201ENST00000254998 BCORL1Q5H9F3 1711 aa33.51■■■□□ 2.96
NXT1-201ENST00000254998 RTEL1-TNFRSF6BF6WH68 1400 aa33.51■■■□□ 2.95
NXT1-201ENST00000254998 AEBP2Q6ZN18 517 aaPredicted RBP33.49■■■□□ 2.95
NXT1-201ENST00000254998 PTPN23Q9H3S7 1636 aa33.48■■■□□ 2.95
NXT1-201ENST00000254998 ADAMTSL3P82987 1691 aa33.48■■■□□ 2.95
NXT1-201ENST00000254998 TCOF1Q13428 1488 aaKnown RBP33.47■■■□□ 2.95
NXT1-201ENST00000254998 AGLP35573 1532 aa33.44■■■□□ 2.94
NXT1-201ENST00000254998 TSPY4P0CV99 314 aa33.39■■■□□ 2.94
NXT1-201ENST00000254998 TSPY10P0CW01 314 aa33.39■■■□□ 2.94
NXT1-201ENST00000254998 MAST1Q9Y2H9 1570 aa33.38■■■□□ 2.93
NXT1-201ENST00000254998 ADGBQ8N7X0 1667 aa33.37■■■□□ 2.93
NXT1-201ENST00000254998 PLXNC1O60486 1568 aa33.37■■■□□ 2.93
NXT1-201ENST00000254998 A2MP01023 1474 aa33.37■■■□□ 2.93
NXT1-201ENST00000254998 MADDQ8WXG6 1647 aa33.35■■■□□ 2.93
NXT1-201ENST00000254998 ABCC5O15440 1437 aa33.32■■■□□ 2.92
NXT1-201ENST00000254998 DNMT1P26358 1616 aaKnown RBP33.31■■■□□ 2.92
NXT1-201ENST00000254998 SHANK2Q9UPX8 1470 aa33.31■■■□□ 2.92
NXT1-201ENST00000254998 PPARGC1BQ86YN6 1023 aaKnown RBP33.3■■■□□ 2.92
NXT1-201ENST00000254998 MLECQ14165 292 aa33.29■■■□□ 2.92
NXT1-201ENST00000254998 DHX29Q7Z478 1369 aaKnown RBP33.29■■■□□ 2.92
NXT1-201ENST00000254998 CROCC2H7BZ55 1655 aa33.29■■■□□ 2.92
NXT1-201ENST00000254998 DAPK1P53355 1430 aa33.28■■■□□ 2.92
NXT1-201ENST00000254998 PTPRMP28827 1452 aa33.27■■■□□ 2.92
NXT1-201ENST00000254998 FER1L4A9Z1Z3 1794 aa33.24■■■□□ 2.91
NXT1-201ENST00000254998 RIMS1Q86UR5 1692 aaKnown RBP33.23■■■□□ 2.91
NXT1-201ENST00000254998 FAM50AQ14320 339 aaKnown RBP33.22■■■□□ 2.91
NXT1-201ENST00000254998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.19■■■□□ 2.9
NXT1-201ENST00000254998 DUOX2Q9NRD8 1548 aa33.12■■■□□ 2.89
NXT1-201ENST00000254998 CNTLNQ9NXG0 1405 aa33.12■■■□□ 2.89
NXT1-201ENST00000254998 PPP6R1Q9UPN7 881 aa33.12■■■□□ 2.89
NXT1-201ENST00000254998 ADGRL2O95490 1459 aa33.12■■■□□ 2.89
NXT1-201ENST00000254998 RRBP1Q9P2E9 1410 aaKnown RBP33.11■■■□□ 2.89
NXT1-201ENST00000254998 KIF15Q9NS87 1388 aa33.11■■■□□ 2.89
NXT1-201ENST00000254998 ANKRD30AQ9BXX3 1397 aa33.1■■■□□ 2.89
NXT1-201ENST00000254998 KIF3BO15066 747 aa33.08■■■□□ 2.89
NXT1-201ENST00000254998 EIF2AK4Q9P2K8 1649 aaKnown RBP33.08■■■□□ 2.89
NXT1-201ENST00000254998 NCOA1Q15788 1441 aa33.08■■■□□ 2.89
NXT1-201ENST00000254998 ESF1Q9H501 851 aaKnown RBP33.07■■■□□ 2.88
NXT1-201ENST00000254998 GGT6Q6P531 493 aa33.06■■■□□ 2.88
NXT1-201ENST00000254998 CHIC2Q9UKJ5 165 aa33.06■■■□□ 2.88
NXT1-201ENST00000254998 FAM135AQ9P2D6 1515 aa33.04■■■□□ 2.88
NXT1-201ENST00000254998 RRP7BPQ9NSQ0 103 aa33.04■■■□□ 2.88
NXT1-201ENST00000254998 PTPRKQ15262 1439 aa33.03■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 240 ms