RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 EIF3AQ14152 1382 aaKnown RBP23.67■■□□□ 1.38
EFR3A-201ENST00000254624 CCER2I3L3R5 266 aa23.67■■□□□ 1.38
EFR3A-201ENST00000254624 CASC1Q6TDU7 716 aa23.66■■□□□ 1.38
EFR3A-201ENST00000254624 PTPRGP23470 1445 aa23.66■■□□□ 1.38
EFR3A-201ENST00000254624 FOXD1Q16676 465 aa23.66■■□□□ 1.38
EFR3A-201ENST00000254624 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
EFR3A-201ENST00000254624 GAPVD1Q14C86 1478 aa23.65■■□□□ 1.38
EFR3A-201ENST00000254624 SUPT16HQ9Y5B9 1047 aaKnown RBP23.64■■□□□ 1.38
EFR3A-201ENST00000254624 ARXQ96QS3 562 aa23.64■■□□□ 1.37
EFR3A-201ENST00000254624 KTN1Q86UP2 1357 aaKnown RBP23.63■■□□□ 1.37
EFR3A-201ENST00000254624 STK26Q9P289 416 aa23.62■■□□□ 1.37
EFR3A-201ENST00000254624 SAFB2Q14151 953 aaKnown RBP eCLIP23.62■■□□□ 1.37
EFR3A-201ENST00000254624 WASHC2CQ9Y4E1 1318 aa23.58■■□□□ 1.37
EFR3A-201ENST00000254624 SENP3-EIF4A1A0A087X0R7 540 aa23.58■■□□□ 1.36
EFR3A-201ENST00000254624 RUSC2Q8N2Y8 1516 aa23.57■■□□□ 1.36
EFR3A-201ENST00000254624 PPP4R2Q9NY27 417 aa23.56■■□□□ 1.36
EFR3A-201ENST00000254624 FRAT1Q92837 279 aaPredicted RBP23.56■■□□□ 1.36
EFR3A-201ENST00000254624 OSCARQ8IYS5 282 aa23.55■■□□□ 1.36
EFR3A-201ENST00000254624 RALBP1Q15311 655 aa23.55■■□□□ 1.36
EFR3A-201ENST00000254624 IGF1RP08069 1367 aa23.54■■□□□ 1.36
EFR3A-201ENST00000254624 EID1Q9Y6B2 187 aa23.54■■□□□ 1.36
EFR3A-201ENST00000254624 NCLP19338 710 aaKnown RBP23.5■■□□□ 1.35
EFR3A-201ENST00000254624 RAD54L2Q9Y4B4 1467 aa23.49■■□□□ 1.35
EFR3A-201ENST00000254624 RTF1Q92541 710 aaKnown RBP23.49■■□□□ 1.35
EFR3A-201ENST00000254624 GOLGA6L22H0YM25 854 aa23.47■■□□□ 1.35
EFR3A-201ENST00000254624 SOX12O15370 315 aa23.47■■□□□ 1.35
EFR3A-201ENST00000254624 L3MBTL2Q969R5 705 aa23.47■■□□□ 1.35
EFR3A-201ENST00000254624 ANP32EQ9BTT0 268 aa23.47■■□□□ 1.35
EFR3A-201ENST00000254624 CALD1Q05682 793 aaKnown RBP23.46■■□□□ 1.35
EFR3A-201ENST00000254624 UACAQ9BZF9 1416 aa23.46■■□□□ 1.35
EFR3A-201ENST00000254624 TERF2IPQ9NYB0 399 aa23.46■■□□□ 1.35
EFR3A-201ENST00000254624 NBR1Q14596 966 aa23.44■■□□□ 1.34
EFR3A-201ENST00000254624 OS9Q13438 667 aaPredicted RBP23.44■■□□□ 1.34
EFR3A-201ENST00000254624 NPHP1O15259 732 aa23.43■■□□□ 1.34
EFR3A-201ENST00000254624 CCDC144AA2RUR9 1427 aa23.42■■□□□ 1.34
EFR3A-201ENST00000254624 PAK3O75914 559 aaPredicted RBP23.4■■□□□ 1.34
EFR3A-201ENST00000254624 CHMP4AQ9BY43 222 aa23.37■■□□□ 1.33
EFR3A-201ENST00000254624 IPO8O15397 1037 aaKnown RBP23.37■■□□□ 1.33
EFR3A-201ENST00000254624 U2AF1L5P0DN76 240 aaPredicted RBP23.37■■□□□ 1.33
EFR3A-201ENST00000254624 U2AF1Q01081 240 aaKnown RBP eCLIP23.37■■□□□ 1.33
EFR3A-201ENST00000254624 CUX1P39880 1505 aa23.36■■□□□ 1.33
EFR3A-201ENST00000254624 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
EFR3A-201ENST00000254624 CYB5RLQ6IPT4 315 aa23.36■■□□□ 1.33
EFR3A-201ENST00000254624 MYOM3Q5VTT5 1437 aa23.36■■□□□ 1.33
EFR3A-201ENST00000254624 RGS3P49796 1198 aa23.35■■□□□ 1.33
EFR3A-201ENST00000254624 CFTRP13569 1480 aa23.34■■□□□ 1.33
EFR3A-201ENST00000254624 AQRO60306 1485 aaKnown RBP eCLIP23.33■■□□□ 1.33
EFR3A-201ENST00000254624 CFAP44Q96MT7 982 aa23.31■■□□□ 1.32
EFR3A-201ENST00000254624 VGFO15240 615 aaPredicted RBP23.31■■□□□ 1.32
EFR3A-201ENST00000254624 CSB-PGBD3P0DP91 1061 aa23.31■■□□□ 1.32
EFR3A-201ENST00000254624 HMGXB3Q12766 1538 aa23.29■■□□□ 1.32
EFR3A-201ENST00000254624 DHX57Q6P158 1386 aaKnown RBP23.28■■□□□ 1.32
EFR3A-201ENST00000254624 MRC2Q9UBG0 1479 aa23.28■■□□□ 1.32
EFR3A-201ENST00000254624 NGDNQ8NEJ9 315 aaKnown RBP23.27■■□□□ 1.32
EFR3A-201ENST00000254624 PHLDB1Q86UU1 1377 aa23.27■■□□□ 1.32
EFR3A-201ENST00000254624 GOLGA2Q08379 1002 aa23.26■■□□□ 1.31
EFR3A-201ENST00000254624 NUTM2DQ5VT03 806 aaPredicted RBP23.26■■□□□ 1.31
EFR3A-201ENST00000254624 CDK11BP21127 795 aaKnown RBP23.26■■□□□ 1.31
EFR3A-201ENST00000254624 NLRP13Q86W25 1043 aa23.26■■□□□ 1.31
EFR3A-201ENST00000254624 ZRSR1Q15695 479 aaKnown RBP23.25■■□□□ 1.31
EFR3A-201ENST00000254624 ERICH6BQ5W0A0 696 aa23.25■■□□□ 1.31
EFR3A-201ENST00000254624 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
EFR3A-201ENST00000254624 IFT140Q96RY7 1462 aa23.23■■□□□ 1.31
EFR3A-201ENST00000254624 CASKIN1Q8WXD9 1431 aa23.23■■□□□ 1.31
EFR3A-201ENST00000254624 FGD6Q6ZV73 1430 aa23.23■■□□□ 1.31
EFR3A-201ENST00000254624 TRAK1Q9UPV9 953 aa23.23■■□□□ 1.31
EFR3A-201ENST00000254624 KIF15Q9NS87 1388 aa23.23■■□□□ 1.31
EFR3A-201ENST00000254624 KCNJ4P48050 445 aa23.22■■□□□ 1.31
EFR3A-201ENST00000254624 LMOD3Q0VAK6 560 aa23.21■■□□□ 1.31
EFR3A-201ENST00000254624 KIF21BO75037 1637 aa23.21■■□□□ 1.31
EFR3A-201ENST00000254624 B4GALNT3Q6L9W6 998 aa23.21■■□□□ 1.31
EFR3A-201ENST00000254624 RCAN3Q9UKA8 241 aa23.2■■□□□ 1.31
EFR3A-201ENST00000254624 CC2D2AQ9P2K1 1620 aa23.2■■□□□ 1.31
EFR3A-201ENST00000254624 FGD1P98174 961 aa23.19■■□□□ 1.3
EFR3A-201ENST00000254624 PRDM2Q13029 1718 aa23.19■■□□□ 1.3
EFR3A-201ENST00000254624 FYCO1Q9BQS8 1478 aa23.19■■□□□ 1.3
EFR3A-201ENST00000254624 MCCP23508 829 aa23.18■■□□□ 1.3
EFR3A-201ENST00000254624 EVC2Q86UK5 1308 aa23.18■■□□□ 1.3
EFR3A-201ENST00000254624 STAC3Q96MF2 364 aa23.18■■□□□ 1.3
EFR3A-201ENST00000254624 ST20-MTHFSA0A0A6YYL1 179 aa23.16■■□□□ 1.3
EFR3A-201ENST00000254624 PDE3BQ13370 1112 aa23.16■■□□□ 1.3
EFR3A-201ENST00000254624 LRRC9Q6ZRR7 1453 aa23.16■■□□□ 1.3
EFR3A-201ENST00000254624 HSP90AB1P08238 724 aaKnown RBP23.16■■□□□ 1.3
EFR3A-201ENST00000254624 STK31Q9BXU1 1019 aa23.16■■□□□ 1.3
EFR3A-201ENST00000254624 AMPHP49418 695 aa23.15■■□□□ 1.3
EFR3A-201ENST00000254624 FAM69CQ0P6D2 419 aa23.15■■□□□ 1.3
EFR3A-201ENST00000254624 HDAC5Q9UQL6 1122 aa23.15■■□□□ 1.3
EFR3A-201ENST00000254624 RWDD1Q9H446 243 aaPredicted RBP23.14■■□□□ 1.29
EFR3A-201ENST00000254624 MYBBP1AQ9BQG0 1328 aaKnown RBP23.13■■□□□ 1.29
EFR3A-201ENST00000254624 SYNJ2O15056 1496 aa23.13■■□□□ 1.29
EFR3A-201ENST00000254624 TRIM44Q96DX7 344 aaPredicted RBP23.13■■□□□ 1.29
EFR3A-201ENST00000254624 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.12■■□□□ 1.29
EFR3A-201ENST00000254624 EFCAB5A4FU69 1503 aa23.1■■□□□ 1.29
EFR3A-201ENST00000254624 ITPRIPQ8IWB1 547 aa23.1■■□□□ 1.29
EFR3A-201ENST00000254624 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.1■■□□□ 1.29
EFR3A-201ENST00000254624 SYNJ1O43426 1573 aa23.1■■□□□ 1.29
EFR3A-201ENST00000254624 CGNL1Q0VF96 1302 aa23.1■■□□□ 1.29
EFR3A-201ENST00000254624 TOPBP1Q92547 1522 aa23.1■■□□□ 1.29
EFR3A-201ENST00000254624 NESP48681 1621 aa23.09■■□□□ 1.29
EFR3A-201ENST00000254624 USP47Q96K76 1375 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms