RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 PTPRGP23470 1445 aa21.8■■□□□ 1.08
RFX1-201ENST00000254325 HSPA5P11021 654 aaKnown RBP21.8■■□□□ 1.08
RFX1-201ENST00000254325 BCANQ96GW7 911 aa21.8■■□□□ 1.08
RFX1-201ENST00000254325 UGGT2Q9NYU1 1516 aa21.79■■□□□ 1.08
RFX1-201ENST00000254325 KDM2AQ9Y2K7 1162 aa21.79■■□□□ 1.08
RFX1-201ENST00000254325 ANKRD30AQ9BXX3 1397 aa21.78■■□□□ 1.08
RFX1-201ENST00000254325 PKD2Q13563 968 aa21.77■■□□□ 1.08
RFX1-201ENST00000254325 TROQ12816 1431 aaPredicted RBP21.76■■□□□ 1.07
RFX1-201ENST00000254325 PLB1Q6P1J6 1458 aa21.76■■□□□ 1.07
RFX1-201ENST00000254325 EIF4G3O43432 1585 aaKnown RBP21.75■■□□□ 1.07
RFX1-201ENST00000254325 HNRNPMP52272 730 aaKnown RBP eCLIP21.75■■□□□ 1.07
RFX1-201ENST00000254325 HNRNPUQ00839 825 aaKnown RBP eCLIP21.73■■□□□ 1.07
RFX1-201ENST00000254325 DAPK1P53355 1430 aa21.71■■□□□ 1.07
RFX1-201ENST00000254325 NUP155O75694 1391 aa21.7■■□□□ 1.06
RFX1-201ENST00000254325 KIAA0556O60303 1618 aa21.7■■□□□ 1.06
RFX1-201ENST00000254325 NUP153P49790 1475 aaKnown RBP21.69■■□□□ 1.06
RFX1-201ENST00000254325 MAGI3Q5TCQ9 1506 aa21.68■■□□□ 1.06
RFX1-201ENST00000254325 DISP1Q96F81 1524 aa21.67■■□□□ 1.06
RFX1-201ENST00000254325 CCER2I3L3R5 266 aa21.67■■□□□ 1.06
RFX1-201ENST00000254325 FKBP8Q14318 412 aa21.66■■□□□ 1.06
RFX1-201ENST00000254325 RAPGEF6Q8TEU7 1601 aa21.65■■□□□ 1.06
RFX1-201ENST00000254325 FAM9BQ8IZU0 186 aa21.65■■□□□ 1.06
RFX1-201ENST00000254325 ABCC5O15440 1437 aa21.64■■□□□ 1.05
RFX1-201ENST00000254325 RGL3Q3MIN7 710 aa21.63■■□□□ 1.05
RFX1-201ENST00000254325 MRS2Q9HD23 443 aa21.62■■□□□ 1.05
RFX1-201ENST00000254325 TCOF1Q13428 1488 aaKnown RBP21.62■■□□□ 1.05
RFX1-201ENST00000254325 ROCK1Q13464 1354 aa21.61■■□□□ 1.05
RFX1-201ENST00000254325 CARD11Q9BXL7 1154 aa21.59■■□□□ 1.05
RFX1-201ENST00000254325 MYT1Q01538 1121 aa21.59■■□□□ 1.05
RFX1-201ENST00000254325 NPM1P06748 294 aaKnown RBP eCLIP21.57■■□□□ 1.04
RFX1-201ENST00000254325 DCAF11Q8TEB1 546 aa21.57■■□□□ 1.04
RFX1-201ENST00000254325 ANKRD50Q9ULJ7 1429 aa21.57■■□□□ 1.04
RFX1-201ENST00000254325 CAMSAP2Q08AD1 1489 aa21.57■■□□□ 1.04
RFX1-201ENST00000254325 AKNAQ7Z591 1439 aa21.56■■□□□ 1.04
RFX1-201ENST00000254325 RSPH4AQ5TD94 716 aa21.55■■□□□ 1.04
RFX1-201ENST00000254325 SUPT16HQ9Y5B9 1047 aaKnown RBP21.55■■□□□ 1.04
RFX1-201ENST00000254325 CEP170Q5SW79 1584 aa21.52■■□□□ 1.04
RFX1-201ENST00000254325 EFCAB2Q5VUJ9 269 aa21.52■■□□□ 1.04
RFX1-201ENST00000254325 NUP160Q12769 1436 aa21.52■■□□□ 1.04
RFX1-201ENST00000254325 KIF15Q9NS87 1388 aa21.52■■□□□ 1.03
RFX1-201ENST00000254325 GPATCH8Q9UKJ3 1502 aaKnown RBP21.51■■□□□ 1.03
RFX1-201ENST00000254325 ARHGEF11O15085 1522 aa21.51■■□□□ 1.03
RFX1-201ENST00000254325 C9orf84Q5VXU9 1444 aa21.49■■□□□ 1.03
RFX1-201ENST00000254325 NBPF8Q3BBV2 869 aa21.48■■□□□ 1.03
RFX1-201ENST00000254325 LRRIQ1Q96JM4 1722 aa21.48■■□□□ 1.03
RFX1-201ENST00000254325 WASHC2AQ641Q2 1341 aa21.48■■□□□ 1.03
RFX1-201ENST00000254325 NCOA1Q15788 1441 aa21.48■■□□□ 1.03
RFX1-201ENST00000254325 ANKRD30BQ9BXX2 1392 aa21.47■■□□□ 1.03
RFX1-201ENST00000254325 ATP10BO94823 1461 aa21.46■■□□□ 1.03
RFX1-201ENST00000254325 KIF14Q15058 1648 aa21.44■■□□□ 1.02
RFX1-201ENST00000254325 TMC1Q8TDI8 760 aa21.43■■□□□ 1.02
RFX1-201ENST00000254325 KIAA1107Q9UPP5 1409 aa21.43■■□□□ 1.02
RFX1-201ENST00000254325 ARHGAP5Q13017 1502 aa21.4■■□□□ 1.02
RFX1-201ENST00000254325 CCDC7Q96M83 1385 aa21.39■■□□□ 1.01
RFX1-201ENST00000254325 ITSN2Q9NZM3 1697 aa21.39■■□□□ 1.01
RFX1-201ENST00000254325 IRX6P78412 446 aaPredicted RBP21.38■■□□□ 1.01
RFX1-201ENST00000254325 DNMT1P26358 1616 aaKnown RBP21.38■■□□□ 1.01
RFX1-201ENST00000254325 USP47Q96K76 1375 aa21.38■■□□□ 1.01
RFX1-201ENST00000254325 CHGAP10645 457 aaKnown RBP21.36■■□□□ 1.01
RFX1-201ENST00000254325 RPRD2Q5VT52 1461 aaKnown RBP21.36■■□□□ 1.01
RFX1-201ENST00000254325 SPAG9O60271 1321 aaKnown RBP21.36■■□□□ 1.01
RFX1-201ENST00000254325 GCC2Q8IWJ2 1684 aa21.35■■□□□ 1.01
RFX1-201ENST00000254325 ROCK2O75116 1388 aaKnown RBP21.35■■□□□ 1.01
RFX1-201ENST00000254325 KIF7Q2M1P5 1343 aa21.35■■□□□ 1.01
RFX1-201ENST00000254325 CCDC144AA2RUR9 1427 aa21.34■■□□□ 1.01
RFX1-201ENST00000254325 PRKRIP1Q9H875 184 aaPredicted RBP21.34■■□□□ 1.01
RFX1-201ENST00000254325 KDM6BO15054 1643 aa21.34■■□□□ 1.01
RFX1-201ENST00000254325 SENP3-EIF4A1A0A087X0R7 540 aa21.33■■□□□ 1
RFX1-201ENST00000254325 CNTLNQ9NXG0 1405 aa21.32■■□□□ 1
RFX1-201ENST00000254325 ST20-MTHFSA0A0A6YYL1 179 aa21.31■■□□□ 1
RFX1-201ENST00000254325 CCDC141Q6ZP82 1450 aa21.3■■□□□ 1
RFX1-201ENST00000254325 C11orf95C9JLR9 678 aaPredicted RBP21.29■■□□□ 1
RFX1-201ENST00000254325 SALL2Q9Y467 1007 aaPredicted RBP21.27■■□□□ 1
RFX1-201ENST00000254325 KANK1Q14678 1352 aa21.25■□□□□ 0.99
RFX1-201ENST00000254325 KIF3BO15066 747 aa21.24■□□□□ 0.99
RFX1-201ENST00000254325 AFAP1Q8N556 730 aa21.24■□□□□ 0.99
RFX1-201ENST00000254325 ABCA8O94911 1581 aa21.23■□□□□ 0.99
RFX1-201ENST00000254325 PZPP20742 1482 aa21.22■□□□□ 0.99
RFX1-201ENST00000254325 PLEKHH2Q8IVE3 1493 aa21.22■□□□□ 0.99
RFX1-201ENST00000254325 ADGRL2O95490 1459 aa21.19■□□□□ 0.98
RFX1-201ENST00000254325 TMF1P82094 1093 aa21.18■□□□□ 0.98
RFX1-201ENST00000254325 ERICH6Q7L0X2 663 aa21.17■□□□□ 0.98
RFX1-201ENST00000254325 CCDC184Q52MB2 194 aa21.16■□□□□ 0.98
RFX1-201ENST00000254325 OSCARQ8IYS5 282 aa21.16■□□□□ 0.98
RFX1-201ENST00000254325 ABCC10Q5T3U5 1492 aa21.16■□□□□ 0.98
RFX1-201ENST00000254325 CC2D1BQ5T0F9 858 aaKnown RBP21.16■□□□□ 0.98
RFX1-201ENST00000254325 SHANK2Q9UPX8 1470 aa21.15■□□□□ 0.98
RFX1-201ENST00000254325 DENND4BO75064 1496 aaPredicted RBP21.13■□□□□ 0.97
RFX1-201ENST00000254325 SYCP2Q9BX26 1530 aa21.13■□□□□ 0.97
RFX1-201ENST00000254325 GGT6Q6P531 493 aa21.12■□□□□ 0.97
RFX1-201ENST00000254325 TEX14Q8IWB6 1497 aa21.12■□□□□ 0.97
RFX1-201ENST00000254325 ARID4BQ4LE39 1312 aaPredicted RBP21.12■□□□□ 0.97
RFX1-201ENST00000254325 ADGBQ8N7X0 1667 aa21.11■□□□□ 0.97
RFX1-201ENST00000254325 NBPF1Q3BBV0 1214 aa21.11■□□□□ 0.97
RFX1-201ENST00000254325 CDCA8Q53HL2 280 aa21.1■□□□□ 0.97
RFX1-201ENST00000254325 KNSTRNQ9Y448 316 aa21.1■□□□□ 0.97
RFX1-201ENST00000254325 CHD1O14646 1710 aa21.09■□□□□ 0.97
RFX1-201ENST00000254325 RALBP1Q15311 655 aa21.09■□□□□ 0.97
RFX1-201ENST00000254325 ABCC2Q92887 1545 aa21.09■□□□□ 0.97
RFX1-201ENST00000254325 KTN1Q86UP2 1357 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms