RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 ANP32AP39687 249 aaKnown RBP22.61■■□□□ 1.21
ACTN4-201ENST00000252699 NPM2Q86SE8 214 aaKnown RBP22.6■■□□□ 1.21
ACTN4-201ENST00000252699 ZBTB7CA1YPR0 619 aa22.59■■□□□ 1.21
ACTN4-201ENST00000252699 CYB5RLQ6IPT4 315 aa22.59■■□□□ 1.21
ACTN4-201ENST00000252699 ARAP1Q96P48 1450 aa22.58■■□□□ 1.21
ACTN4-201ENST00000252699 TNNT2P45379 298 aaPredicted RBP22.57■■□□□ 1.2
ACTN4-201ENST00000252699 HDGFP51858 240 aaKnown RBP22.56■■□□□ 1.2
ACTN4-201ENST00000252699 SAFB2Q14151 953 aaKnown RBP eCLIP22.55■■□□□ 1.22e-6■■□□□ 14.4
ACTN4-201ENST00000252699 PHLDB1Q86UU1 1377 aa22.54■■□□□ 1.2
ACTN4-201ENST00000252699 IFT140Q96RY7 1462 aa22.54■■□□□ 1.2
ACTN4-201ENST00000252699 CASKIN1Q8WXD9 1431 aa22.54■■□□□ 1.2
ACTN4-201ENST00000252699 ROCK2O75116 1388 aaKnown RBP22.53■■□□□ 1.2
ACTN4-201ENST00000252699 LRRC9Q6ZRR7 1453 aa22.52■■□□□ 1.2
ACTN4-201ENST00000252699 ZNF644Q9H582 1327 aaPredicted RBP22.52■■□□□ 1.2
ACTN4-201ENST00000252699 FGD6Q6ZV73 1430 aa22.52■■□□□ 1.2
ACTN4-201ENST00000252699 STK26Q9P289 416 aa22.51■■□□□ 1.19
ACTN4-201ENST00000252699 WASHC2CQ9Y4E1 1318 aa22.51■■□□□ 1.19
ACTN4-201ENST00000252699 SRPK2P78362 688 aaKnown RBP22.5■■□□□ 1.19
ACTN4-201ENST00000252699 MYOM3Q5VTT5 1437 aa22.5■■□□□ 1.19
ACTN4-201ENST00000252699 NEUROD2Q15784 382 aa22.5■■□□□ 1.19
ACTN4-201ENST00000252699 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
ACTN4-201ENST00000252699 SUPT16HQ9Y5B9 1047 aaKnown RBP22.49■■□□□ 1.19
ACTN4-201ENST00000252699 NUDCQ9Y266 331 aa22.48■■□□□ 1.19
ACTN4-201ENST00000252699 CCER2I3L3R5 266 aa22.47■■□□□ 1.19
ACTN4-201ENST00000252699 PEG3Q9GZU2 1588 aa22.46■■□□□ 1.19
ACTN4-201ENST00000252699 UNC13AQ9UPW8 1703 aa22.43■■□□□ 1.18
ACTN4-201ENST00000252699 MAPK8IP3Q9UPT6 1336 aa22.42■■□□□ 1.18
ACTN4-201ENST00000252699 LMOD2Q6P5Q4 547 aa22.41■■□□□ 1.18
ACTN4-201ENST00000252699 UPF2Q9HAU5 1272 aaKnown RBP22.41■■□□□ 1.18
ACTN4-201ENST00000252699 NCOA2Q15596 1464 aa22.41■■□□□ 1.18
ACTN4-201ENST00000252699 PRG4Q92954 1404 aaPredicted RBP22.4■■□□□ 1.18
ACTN4-201ENST00000252699 FYCO1Q9BQS8 1478 aa22.4■■□□□ 1.18
ACTN4-201ENST00000252699 U2SURPO15042 1029 aaKnown RBP22.4■■□□□ 1.18
ACTN4-201ENST00000252699 PRDM2Q13029 1718 aa22.39■■□□□ 1.18
ACTN4-201ENST00000252699 LAMC3Q9Y6N6 1575 aa22.39■■□□□ 1.18
ACTN4-201ENST00000252699 MORC1Q86VD1 984 aa22.38■■□□□ 1.17
ACTN4-201ENST00000252699 CCDC144AA2RUR9 1427 aa22.38■■□□□ 1.17
ACTN4-201ENST00000252699 SNAPC4Q5SXM2 1469 aa22.38■■□□□ 1.17
ACTN4-201ENST00000252699 ABCA10Q8WWZ4 1543 aa22.37■■□□□ 1.17
ACTN4-201ENST00000252699 HAP1P54257 671 aaPredicted RBP22.36■■□□□ 1.17
ACTN4-201ENST00000252699 EFCAB5A4FU69 1503 aa22.36■■□□□ 1.17
ACTN4-201ENST00000252699 NUTM2DQ5VT03 806 aaPredicted RBP22.35■■□□□ 1.17
ACTN4-201ENST00000252699 KTN1Q86UP2 1357 aaKnown RBP22.35■■□□□ 1.17
ACTN4-201ENST00000252699 A0A0G2JS52 829 aa22.33■■□□□ 1.17
ACTN4-201ENST00000252699 KIF15Q9NS87 1388 aa22.32■■□□□ 1.16
ACTN4-201ENST00000252699 MYH16Q9H6N6 1097 aa22.31■■□□□ 1.16
ACTN4-201ENST00000252699 LAS1LQ9Y4W2 734 aaKnown RBP22.31■■□□□ 1.16
ACTN4-201ENST00000252699 ST20-MTHFSA0A0A6YYL1 179 aa22.29■■□□□ 1.16
ACTN4-201ENST00000252699 SOX12O15370 315 aa22.29■■□□□ 1.16
ACTN4-201ENST00000252699 SYNJ2O15056 1496 aa22.29■■□□□ 1.16
ACTN4-201ENST00000252699 EIF3AQ14152 1382 aaKnown RBP22.29■■□□□ 1.16
ACTN4-201ENST00000252699 HDGFL2Q7Z4V5 671 aaPredicted RBP22.28■■□□□ 1.16
ACTN4-201ENST00000252699 HSP90AA1P07900 732 aaKnown RBP22.27■■□□□ 1.16
ACTN4-201ENST00000252699 RALBP1Q15311 655 aa22.27■■□□□ 1.16
ACTN4-201ENST00000252699 RRBP1Q9P2E9 1410 aaKnown RBP22.27■■□□□ 1.15
ACTN4-201ENST00000252699 FAM69CQ0P6D2 419 aa22.26■■□□□ 1.15
ACTN4-201ENST00000252699 UACAQ9BZF9 1416 aa22.26■■□□□ 1.15
ACTN4-201ENST00000252699 ANKRD50Q9ULJ7 1429 aa22.24■■□□□ 1.15
ACTN4-201ENST00000252699 TRAK1Q9UPV9 953 aa22.24■■□□□ 1.15
ACTN4-201ENST00000252699 FTSJ3Q8IY81 847 aaKnown RBP22.23■■□□□ 1.15
ACTN4-201ENST00000252699 PNNQ9H307 717 aaKnown RBP22.23■■□□□ 1.15
ACTN4-201ENST00000252699 AFAP1Q8N556 730 aa22.23■■□□□ 1.15
ACTN4-201ENST00000252699 KIAA0586Q9BVV6 1533 aa22.22■■□□□ 1.15
ACTN4-201ENST00000252699 FRAT1Q92837 279 aaPredicted RBP22.22■■□□□ 1.15
ACTN4-201ENST00000252699 URB2Q14146 1524 aaKnown RBP22.19■■□□□ 1.14
ACTN4-201ENST00000252699 EID1Q9Y6B2 187 aa22.19■■□□□ 1.14
ACTN4-201ENST00000252699 PPP4R2Q9NY27 417 aa22.19■■□□□ 1.14
ACTN4-201ENST00000252699 TROQ12816 1431 aaPredicted RBP22.18■■□□□ 1.14
ACTN4-201ENST00000252699 VGFO15240 615 aaPredicted RBP22.17■■□□□ 1.14
ACTN4-201ENST00000252699 TIAM1Q13009 1591 aa22.16■■□□□ 1.14
ACTN4-201ENST00000252699 USP47Q96K76 1375 aa22.16■■□□□ 1.14
ACTN4-201ENST00000252699 ARHGAP5Q13017 1502 aa22.15■■□□□ 1.14
ACTN4-201ENST00000252699 EHBP1L1Q8N3D4 1523 aa22.14■■□□□ 1.14
ACTN4-201ENST00000252699 U2AF1L5P0DN76 240 aaPredicted RBP22.14■■□□□ 1.13
ACTN4-201ENST00000252699 U2AF1Q01081 240 aaKnown RBP eCLIP22.14■■□□□ 1.13
ACTN4-201ENST00000252699 TERF2IPQ9NYB0 399 aa22.14■■□□□ 1.13
ACTN4-201ENST00000252699 NLRP13Q86W25 1043 aa22.14■■□□□ 1.13
ACTN4-201ENST00000252699 MIA2Q96PC5 1412 aa22.13■■□□□ 1.13
ACTN4-201ENST00000252699 PANK3Q9H999 370 aa22.1■■□□□ 1.13
ACTN4-201ENST00000252699 B4GALNT3Q6L9W6 998 aa22.09■■□□□ 1.13
ACTN4-201ENST00000252699 PAK3O75914 559 aaPredicted RBP22.09■■□□□ 1.13
ACTN4-201ENST00000252699 IQGAP2Q13576 1575 aa22.09■■□□□ 1.13
ACTN4-201ENST00000252699 HECW1Q76N89 1606 aa22.09■■□□□ 1.13
ACTN4-201ENST00000252699 EPRSP07814 1512 aaKnown RBP22.07■■□□□ 1.12
ACTN4-201ENST00000252699 CUL7Q14999 1698 aa22.06■■□□□ 1.12
ACTN4-201ENST00000252699 ZNF608Q9ULD9 1512 aaPredicted RBP22.05■■□□□ 1.12
ACTN4-201ENST00000252699 CDK13Q14004 1512 aaKnown RBP22.05■■□□□ 1.12
ACTN4-201ENST00000252699 MS4A1P11836 297 aa22.05■■□□□ 1.12
ACTN4-201ENST00000252699 ARXQ96QS3 562 aa22.05■■□□□ 1.12
ACTN4-201ENST00000252699 BIVM-ERCC5R4GMW8 1640 aa22.05■■□□□ 1.12
ACTN4-201ENST00000252699 NUTM2FA1L443 756 aa22.04■■□□□ 1.12
ACTN4-201ENST00000252699 PRKRIP1Q9H875 184 aaPredicted RBP22.04■■□□□ 1.12
ACTN4-201ENST00000252699 GRIN2AQ12879 1464 aa22.04■■□□□ 1.12
ACTN4-201ENST00000252699 C9orf84Q5VXU9 1444 aa22.03■■□□□ 1.12
ACTN4-201ENST00000252699 MAGI1Q96QZ7 1491 aaPredicted RBP22.02■■□□□ 1.12
ACTN4-201ENST00000252699 RGS3P49796 1198 aa22.01■■□□□ 1.11
ACTN4-201ENST00000252699 HFM1A2PYH4 1435 aa22.01■■□□□ 1.11
ACTN4-201ENST00000252699 NGDNQ8NEJ9 315 aaKnown RBP22■■□□□ 1.11
ACTN4-201ENST00000252699 STAC3Q96MF2 364 aa21.99■■□□□ 1.11
ACTN4-201ENST00000252699 MYBBP1AQ9BQG0 1328 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms