RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MPHOSPH9Q99550 1183 aa22.41■■□□□ 1.18
LRFN1-201ENST00000248668 DAPK1P53355 1430 aa22.39■■□□□ 1.17
LRFN1-201ENST00000248668 NUP160Q12769 1436 aa22.38■■□□□ 1.17
LRFN1-201ENST00000248668 ABCC5O15440 1437 aa22.37■■□□□ 1.17
LRFN1-201ENST00000248668 TROQ12816 1431 aaPredicted RBP22.36■■□□□ 1.17
LRFN1-201ENST00000248668 DENND4BO75064 1496 aaPredicted RBP22.35■■□□□ 1.17
LRFN1-201ENST00000248668 PLEKHD1A6NEE1 506 aa22.33■■□□□ 1.17
LRFN1-201ENST00000248668 SLC4A1APQ9BWU0 796 aaKnown RBP22.32■■□□□ 1.16
LRFN1-201ENST00000248668 GCC2Q8IWJ2 1684 aa22.31■■□□□ 1.16
LRFN1-201ENST00000248668 KIF14Q15058 1648 aa22.31■■□□□ 1.16
LRFN1-201ENST00000248668 L3MBTL2Q969R5 705 aa22.28■■□□□ 1.16
LRFN1-201ENST00000248668 AKNAQ7Z591 1439 aa22.28■■□□□ 1.16
LRFN1-201ENST00000248668 CAMSAP2Q08AD1 1489 aa22.27■■□□□ 1.16
LRFN1-201ENST00000248668 GPATCH8Q9UKJ3 1502 aaKnown RBP22.27■■□□□ 1.16
LRFN1-201ENST00000248668 BCL11AQ9H165 835 aa22.25■■□□□ 1.15
LRFN1-201ENST00000248668 DNMT1P26358 1616 aaKnown RBP22.25■■□□□ 1.15
LRFN1-201ENST00000248668 ROCK1Q13464 1354 aa22.23■■□□□ 1.15
LRFN1-201ENST00000248668 KDM5BQ9UGL1 1544 aa22.23■■□□□ 1.15
LRFN1-201ENST00000248668 ATP10BO94823 1461 aa22.23■■□□□ 1.15
LRFN1-201ENST00000248668 PTPRGP23470 1445 aa22.22■■□□□ 1.15
LRFN1-201ENST00000248668 HSPA5P11021 654 aaKnown RBP22.22■■□□□ 1.15
LRFN1-201ENST00000248668 ANP32CO43423 234 aa22.21■■□□□ 1.15
LRFN1-201ENST00000248668 HNRNPMP52272 730 aaKnown RBP eCLIP22.19■■□□□ 1.14
LRFN1-201ENST00000248668 NCOA1Q15788 1441 aa22.17■■□□□ 1.14
LRFN1-201ENST00000248668 ANKRD30BQ9BXX2 1392 aa22.16■■□□□ 1.14
LRFN1-201ENST00000248668 ABCA8O94911 1581 aa22.16■■□□□ 1.14
LRFN1-201ENST00000248668 ZNF326Q5BKZ1 582 aaKnown RBP22.16■■□□□ 1.14
LRFN1-201ENST00000248668 NBPF8Q3BBV2 869 aa22.15■■□□□ 1.14
LRFN1-201ENST00000248668 EIF4G2P78344 907 aaKnown RBP eCLIP22.13■■□□□ 1.136e-7■■■■□ 19.7
LRFN1-201ENST00000248668 PKD2Q13563 968 aa22.13■■□□□ 1.13
LRFN1-201ENST00000248668 ITSN2Q9NZM3 1697 aa22.12■■□□□ 1.13
LRFN1-201ENST00000248668 ANKRD30AQ9BXX3 1397 aa22.11■■□□□ 1.13
LRFN1-201ENST00000248668 TSPY4P0CV99 314 aa22.11■■□□□ 1.13
LRFN1-201ENST00000248668 TSPY10P0CW01 314 aa22.11■■□□□ 1.13
LRFN1-201ENST00000248668 WASHC2AQ641Q2 1341 aa22.1■■□□□ 1.13
LRFN1-201ENST00000248668 CHD1O14646 1710 aa22.09■■□□□ 1.13
LRFN1-201ENST00000248668 PZPP20742 1482 aa22.08■■□□□ 1.12
LRFN1-201ENST00000248668 ABCC10Q5T3U5 1492 aa22.08■■□□□ 1.12
LRFN1-201ENST00000248668 ADCY10Q96PN6 1610 aa22.07■■□□□ 1.12
LRFN1-201ENST00000248668 ANKRD50Q9ULJ7 1429 aa22.07■■□□□ 1.12
LRFN1-201ENST00000248668 PRKCSHP14314 528 aaPredicted RBP22.06■■□□□ 1.12
LRFN1-201ENST00000248668 RPRD2Q5VT52 1461 aaKnown RBP22.06■■□□□ 1.12
LRFN1-201ENST00000248668 C11orf95C9JLR9 678 aaPredicted RBP22.06■■□□□ 1.12
LRFN1-201ENST00000248668 CDC42BPAQ5VT25 1732 aa22.05■■□□□ 1.12
LRFN1-201ENST00000248668 C9orf84Q5VXU9 1444 aa22.05■■□□□ 1.12
LRFN1-201ENST00000248668 NUP155O75694 1391 aa22.05■■□□□ 1.12
LRFN1-201ENST00000248668 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
LRFN1-201ENST00000248668 CNGB1Q14028 1251 aaPredicted RBP22.03■■□□□ 1.12
LRFN1-201ENST00000248668 POLR3GLQ9BT43 218 aa22.02■■□□□ 1.12
LRFN1-201ENST00000248668 SUPT16HQ9Y5B9 1047 aaKnown RBP22.01■■□□□ 1.11
LRFN1-201ENST00000248668 TEX14Q8IWB6 1497 aa22■■□□□ 1.11
LRFN1-201ENST00000248668 CCER2I3L3R5 266 aa22■■□□□ 1.11
LRFN1-201ENST00000248668 ADGRL2O95490 1459 aa21.99■■□□□ 1.11
LRFN1-201ENST00000248668 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
LRFN1-201ENST00000248668 ADGBQ8N7X0 1667 aa21.99■■□□□ 1.11
LRFN1-201ENST00000248668 KIAA1107Q9UPP5 1409 aa21.98■■□□□ 1.11
LRFN1-201ENST00000248668 CROCC2H7BZ55 1655 aa21.96■■□□□ 1.11
LRFN1-201ENST00000248668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.96■■□□□ 1.11
LRFN1-201ENST00000248668 KDM2AQ9Y2K7 1162 aa21.96■■□□□ 1.11
LRFN1-201ENST00000248668 BCANQ96GW7 911 aa21.95■■□□□ 1.1
LRFN1-201ENST00000248668 MBD5Q9P267 1494 aa21.91■■□□□ 1.1
LRFN1-201ENST00000248668 CCDC7Q96M83 1385 aa21.9■■□□□ 1.1
LRFN1-201ENST00000248668 ARHGAP5Q13017 1502 aa21.9■■□□□ 1.1
LRFN1-201ENST00000248668 CCDC184Q52MB2 194 aa21.89■■□□□ 1.09
LRFN1-201ENST00000248668 SAMD9LQ8IVG5 1584 aa21.89■■□□□ 1.09
LRFN1-201ENST00000248668 KIF7Q2M1P5 1343 aa21.88■■□□□ 1.09
LRFN1-201ENST00000248668 TTC37Q6PGP7 1564 aa21.87■■□□□ 1.09
LRFN1-201ENST00000248668 HNRNPUQ00839 825 aaKnown RBP eCLIP21.87■■□□□ 1.09
LRFN1-201ENST00000248668 SHANK2Q9UPX8 1470 aa21.87■■□□□ 1.09
LRFN1-201ENST00000248668 CDC42BPBQ9Y5S2 1711 aa21.87■■□□□ 1.09
LRFN1-201ENST00000248668 SYCP2Q9BX26 1530 aa21.87■■□□□ 1.09
LRFN1-201ENST00000248668 CCDC141Q6ZP82 1450 aa21.87■■□□□ 1.09
LRFN1-201ENST00000248668 FKBP8Q14318 412 aa21.85■■□□□ 1.09
LRFN1-201ENST00000248668 DCAF11Q8TEB1 546 aa21.85■■□□□ 1.09
LRFN1-201ENST00000248668 CNTLNQ9NXG0 1405 aa21.84■■□□□ 1.09
LRFN1-201ENST00000248668 RGL3Q3MIN7 710 aa21.84■■□□□ 1.09
LRFN1-201ENST00000248668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.83■■□□□ 1.09
LRFN1-201ENST00000248668 SHROOM2Q13796 1616 aa21.83■■□□□ 1.09
LRFN1-201ENST00000248668 ABCC2Q92887 1545 aa21.83■■□□□ 1.08
LRFN1-201ENST00000248668 USP47Q96K76 1375 aa21.82■■□□□ 1.08
LRFN1-201ENST00000248668 PREX2Q70Z35 1606 aa21.82■■□□□ 1.08
LRFN1-201ENST00000248668 FAM9BQ8IZU0 186 aa21.81■■□□□ 1.08
LRFN1-201ENST00000248668 SPATA31E1Q6ZUB1 1445 aa21.8■■□□□ 1.08
LRFN1-201ENST00000248668 CARD11Q9BXL7 1154 aa21.8■■□□□ 1.08
LRFN1-201ENST00000248668 PRKRIP1Q9H875 184 aaPredicted RBP21.79■■□□□ 1.08
LRFN1-201ENST00000248668 ARHGEF5Q12774 1597 aa21.78■■□□□ 1.08
LRFN1-201ENST00000248668 RSPH4AQ5TD94 716 aa21.78■■□□□ 1.08
LRFN1-201ENST00000248668 ANP32EQ9BTT0 268 aa21.78■■□□□ 1.08
LRFN1-201ENST00000248668 MRS2Q9HD23 443 aa21.76■■□□□ 1.07
LRFN1-201ENST00000248668 PLEKHH2Q8IVE3 1493 aa21.74■■□□□ 1.07
LRFN1-201ENST00000248668 EFCAB2Q5VUJ9 269 aa21.73■■□□□ 1.07
LRFN1-201ENST00000248668 ARHGEF12Q9NZN5 1544 aa21.73■■□□□ 1.07
LRFN1-201ENST00000248668 FAM135AQ9P2D6 1515 aa21.73■■□□□ 1.07
LRFN1-201ENST00000248668 SENP3-EIF4A1A0A087X0R7 540 aa21.72■■□□□ 1.07
LRFN1-201ENST00000248668 NEFLP07196 543 aa21.72■■□□□ 1.07
LRFN1-201ENST00000248668 AFAP1Q8N556 730 aa21.72■■□□□ 1.07
LRFN1-201ENST00000248668 MYT1LQ9UL68 1186 aa21.71■■□□□ 1.07
LRFN1-201ENST00000248668 ST20-MTHFSA0A0A6YYL1 179 aa21.71■■□□□ 1.07
LRFN1-201ENST00000248668 CLASP1Q7Z460 1538 aa21.69■■□□□ 1.06
LRFN1-201ENST00000248668 ZCCHC11Q5TAX3 1644 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms