RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 PREX2Q70Z35 1606 aa33.95■■■■□ 3.03
HCFC1R1-201ENST00000248089 EFCAB2Q5VUJ9 269 aa33.93■■■■□ 3.02
HCFC1R1-201ENST00000248089 SCAPERQ9BY12 1400 aa33.93■■■■□ 3.02
HCFC1R1-201ENST00000248089 ZMYM4Q5VZL5 1548 aa33.93■■■■□ 3.02
HCFC1R1-201ENST00000248089 CDC42BPAQ5VT25 1732 aa33.9■■■■□ 3.02
HCFC1R1-201ENST00000248089 POGZQ7Z3K3 1410 aa33.89■■■■□ 3.02
HCFC1R1-201ENST00000248089 ZFYVE16Q7Z3T8 1539 aa33.86■■■■□ 3.01
HCFC1R1-201ENST00000248089 YEATS2Q9ULM3 1422 aa33.8■■■■□ 3
HCFC1R1-201ENST00000248089 MTUS2Q5JR59 1369 aa33.8■■■■□ 3
HCFC1R1-201ENST00000248089 BCORL1Q5H9F3 1711 aa33.79■■■■□ 3
HCFC1R1-201ENST00000248089 ARID4BQ4LE39 1312 aaPredicted RBP33.79■■■■□ 3
HCFC1R1-201ENST00000248089 MAGI2Q86UL8 1455 aa33.78■■■■□ 3
HCFC1R1-201ENST00000248089 ITSN2Q9NZM3 1697 aa33.77■■■■□ 3
HCFC1R1-201ENST00000248089 ZNF518AQ6AHZ1 1483 aa33.76■■■■□ 3
HCFC1R1-201ENST00000248089 ABCC1P33527 1531 aa33.76■■■■□ 3
HCFC1R1-201ENST00000248089 EHBP1L1Q8N3D4 1523 aa33.76■■■■□ 3
HCFC1R1-201ENST00000248089 ADAMTSL3P82987 1691 aa33.76■■■□□ 2.99
HCFC1R1-201ENST00000248089 SIGLEC1Q9BZZ2 1709 aa33.73■■■□□ 2.99
HCFC1R1-201ENST00000248089 KDM5CP41229 1560 aa33.72■■■□□ 2.99
HCFC1R1-201ENST00000248089 GPATCH8Q9UKJ3 1502 aaKnown RBP33.7■■■□□ 2.99
HCFC1R1-201ENST00000248089 HECW2Q9P2P5 1572 aa33.7■■■□□ 2.99
HCFC1R1-201ENST00000248089 VPS8Q8N3P4 1428 aa33.7■■■□□ 2.98
HCFC1R1-201ENST00000248089 MADDQ8WXG6 1647 aa33.69■■■□□ 2.98
HCFC1R1-201ENST00000248089 SAMD9LQ8IVG5 1584 aa33.68■■■□□ 2.98
HCFC1R1-201ENST00000248089 ARHGEF12Q9NZN5 1544 aa33.67■■■□□ 2.98
HCFC1R1-201ENST00000248089 AFAP1Q8N556 730 aa33.66■■■□□ 2.98
HCFC1R1-201ENST00000248089 CCNB3Q8WWL7 1395 aa33.66■■■□□ 2.98
HCFC1R1-201ENST00000248089 ZNF777Q9ULD5 760 aaPredicted RBP33.66■■■□□ 2.98
HCFC1R1-201ENST00000248089 TIAM1Q13009 1591 aa33.65■■■□□ 2.98
HCFC1R1-201ENST00000248089 MYT1LQ9UL68 1186 aa33.64■■■□□ 2.98
HCFC1R1-201ENST00000248089 TRAPPC8Q9Y2L5 1435 aa33.62■■■□□ 2.97
HCFC1R1-201ENST00000248089 SYCP2Q9BX26 1530 aa33.62■■■□□ 2.97
HCFC1R1-201ENST00000248089 ATP10AO60312 1499 aa33.62■■■□□ 2.97
HCFC1R1-201ENST00000248089 RIMS1Q86UR5 1692 aaKnown RBP33.61■■■□□ 2.97
HCFC1R1-201ENST00000248089 SUPT6HQ7KZ85 1726 aaKnown RBP33.61■■■□□ 2.97
HCFC1R1-201ENST00000248089 C9orf84Q5VXU9 1444 aa33.61■■■□□ 2.97
HCFC1R1-201ENST00000248089 ABCA6Q8N139 1617 aa33.59■■■□□ 2.97
HCFC1R1-201ENST00000248089 DIP2CQ9Y2E4 1556 aa33.59■■■□□ 2.97
HCFC1R1-201ENST00000248089 PTPRMP28827 1452 aa33.58■■■□□ 2.97
HCFC1R1-201ENST00000248089 CFDP1Q9UEE9 299 aaPredicted RBP33.58■■■□□ 2.97
HCFC1R1-201ENST00000248089 MLH3Q9UHC1 1453 aa33.55■■■□□ 2.96
HCFC1R1-201ENST00000248089 FER1L4A9Z1Z3 1794 aa33.55■■■□□ 2.96
HCFC1R1-201ENST00000248089 KIDINS220Q9ULH0 1771 aa33.53■■■□□ 2.96
HCFC1R1-201ENST00000248089 PLEKHH2Q8IVE3 1493 aa33.52■■■□□ 2.96
HCFC1R1-201ENST00000248089 MLECQ14165 292 aa33.52■■■□□ 2.96
HCFC1R1-201ENST00000248089 NCOA2Q15596 1464 aa33.51■■■□□ 2.96
HCFC1R1-201ENST00000248089 HNRNPMP52272 730 aaKnown RBP eCLIP33.48■■■□□ 2.95
HCFC1R1-201ENST00000248089 REREQ9P2R6 1566 aa33.47■■■□□ 2.95
HCFC1R1-201ENST00000248089 KIAA1107Q9UPP5 1409 aa33.46■■■□□ 2.95
HCFC1R1-201ENST00000248089 LRRC9Q6ZRR7 1453 aa33.46■■■□□ 2.95
HCFC1R1-201ENST00000248089 MAP3K1Q13233 1512 aa33.42■■■□□ 2.94
HCFC1R1-201ENST00000248089 INO80Q9ULG1 1556 aaPredicted RBP33.41■■■□□ 2.94
HCFC1R1-201ENST00000248089 ATP7AQ04656 1500 aa33.4■■■□□ 2.94
HCFC1R1-201ENST00000248089 SPAG9O60271 1321 aaKnown RBP33.4■■■□□ 2.94
HCFC1R1-201ENST00000248089 ZNF644Q9H582 1327 aaPredicted RBP33.4■■■□□ 2.94
HCFC1R1-201ENST00000248089 PLPPR3Q6T4P5 718 aa33.39■■■□□ 2.94
HCFC1R1-201ENST00000248089 CAMSAP2Q08AD1 1489 aa33.35■■■□□ 2.93
HCFC1R1-201ENST00000248089 AGLP35573 1532 aa33.33■■■□□ 2.93
HCFC1R1-201ENST00000248089 KANK4Q5T7N3 995 aaPredicted RBP33.33■■■□□ 2.93
HCFC1R1-201ENST00000248089 MBD5Q9P267 1494 aa33.31■■■□□ 2.92
HCFC1R1-201ENST00000248089 APLP2Q06481 763 aa33.28■■■□□ 2.92
HCFC1R1-201ENST00000248089 ADGBQ8N7X0 1667 aa33.27■■■□□ 2.92
HCFC1R1-201ENST00000248089 CCDC141Q6ZP82 1450 aa33.25■■■□□ 2.91
HCFC1R1-201ENST00000248089 PLXNC1O60486 1568 aa33.23■■■□□ 2.91
HCFC1R1-201ENST00000248089 A2MP01023 1474 aa33.22■■■□□ 2.91
HCFC1R1-201ENST00000248089 LMTK3Q96Q04 1460 aa33.2■■■□□ 2.91
HCFC1R1-201ENST00000248089 ARHGEF5Q12774 1597 aa33.19■■■□□ 2.9
HCFC1R1-201ENST00000248089 MYOM3Q5VTT5 1437 aa33.19■■■□□ 2.9
HCFC1R1-201ENST00000248089 C3P01024 1663 aa33.17■■■□□ 2.9
HCFC1R1-201ENST00000248089 ESF1Q9H501 851 aaKnown RBP33.17■■■□□ 2.9
HCFC1R1-201ENST00000248089 RTEL1-TNFRSF6BF6WH68 1400 aa33.16■■■□□ 2.9
HCFC1R1-201ENST00000248089 CEBPAP49715 358 aaPredicted RBP33.14■■■□□ 2.9
HCFC1R1-201ENST00000248089 PREX1Q8TCU6 1659 aa33.13■■■□□ 2.89
HCFC1R1-201ENST00000248089 MIA2Q96PC5 1412 aa33.11■■■□□ 2.89
HCFC1R1-201ENST00000248089 RSPH4AQ5TD94 716 aa33.09■■■□□ 2.89
HCFC1R1-201ENST00000248089 MROH2AA6NES4 1674 aa33.08■■■□□ 2.89
HCFC1R1-201ENST00000248089 CLTCQ00610 1675 aaKnown RBP33.08■■■□□ 2.89
HCFC1R1-201ENST00000248089 CNTLNQ9NXG0 1405 aa33.08■■■□□ 2.89
HCFC1R1-201ENST00000248089 PTPN23Q9H3S7 1636 aa33.05■■■□□ 2.88
HCFC1R1-201ENST00000248089 TSPY4P0CV99 314 aa33.03■■■□□ 2.88
HCFC1R1-201ENST00000248089 TSPY10P0CW01 314 aa33.03■■■□□ 2.88
HCFC1R1-201ENST00000248089 MAST1Q9Y2H9 1570 aa33.02■■■□□ 2.88
HCFC1R1-201ENST00000248089 HSPA2P54652 639 aa33.02■■■□□ 2.88
HCFC1R1-201ENST00000248089 DHX29Q7Z478 1369 aaKnown RBP33.01■■■□□ 2.88
HCFC1R1-201ENST00000248089 GGT6Q6P531 493 aa33.01■■■□□ 2.87
HCFC1R1-201ENST00000248089 SETD1BQ9UPS6 1966 aaKnown RBP33■■■□□ 2.87
HCFC1R1-201ENST00000248089 CROCC2H7BZ55 1655 aa32.99■■■□□ 2.87
HCFC1R1-201ENST00000248089 UHRF1BP1Q6BDS2 1440 aa32.96■■■□□ 2.87
HCFC1R1-201ENST00000248089 FGD6Q6ZV73 1430 aa32.95■■■□□ 2.87
HCFC1R1-201ENST00000248089 KIF3BO15066 747 aa32.92■■■□□ 2.86
HCFC1R1-201ENST00000248089 ZMYM3Q14202 1370 aa32.92■■■□□ 2.86
HCFC1R1-201ENST00000248089 DNMT1P26358 1616 aaKnown RBP32.89■■■□□ 2.86
HCFC1R1-201ENST00000248089 TCOF1Q13428 1488 aaKnown RBP32.88■■■□□ 2.85
HCFC1R1-201ENST00000248089 SHANK2Q9UPX8 1470 aa32.86■■■□□ 2.85
HCFC1R1-201ENST00000248089 ABCC5O15440 1437 aa32.85■■■□□ 2.85
HCFC1R1-201ENST00000248089 NPATQ14207 1427 aa32.85■■■□□ 2.85
HCFC1R1-201ENST00000248089 PPP6R1Q9UPN7 881 aa32.85■■■□□ 2.85
HCFC1R1-201ENST00000248089 KDM5DQ9BY66 1539 aa32.85■■■□□ 2.85
HCFC1R1-201ENST00000248089 EIF2AK4Q9P2K8 1649 aaKnown RBP32.84■■■□□ 2.85
HCFC1R1-201ENST00000248089 DAPK1P53355 1430 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms