RNA–Protein interactions for RNA: ENST00000247829.7

TSPAN8-201, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-201ENST00000247829 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
TSPAN8-201ENST00000247829 CFAP44Q96MT7 982 aa12.12□□□□□ -0.47
TSPAN8-201ENST00000247829 TMEM92Q6UXU6 159 aa12.11□□□□□ -0.47
TSPAN8-201ENST00000247829 BCANQ96GW7 911 aa12.08□□□□□ -0.48
TSPAN8-201ENST00000247829 C2orf72A6NCS6 295 aa12.02□□□□□ -0.49
TSPAN8-201ENST00000247829 KDM2AQ9Y2K7 1162 aa12.02□□□□□ -0.49
TSPAN8-201ENST00000247829 KIF3CO14782 793 aa12.01□□□□□ -0.49
TSPAN8-201ENST00000247829 TMC2Q8TDI7 906 aa12□□□□□ -0.49
TSPAN8-201ENST00000247829 CADPS2Q86UW7 1296 aa11.98□□□□□ -0.49
TSPAN8-201ENST00000247829 FAM163AQ96GL9 167 aaPredicted RBP11.98□□□□□ -0.49
TSPAN8-201ENST00000247829 GPHNQ9NQX3 736 aaPredicted RBP11.97□□□□□ -0.49
TSPAN8-201ENST00000247829 SNPHO15079 494 aa11.95□□□□□ -0.5
TSPAN8-201ENST00000247829 NCKAP5LQ9HCH0 1330 aa11.94□□□□□ -0.5
TSPAN8-201ENST00000247829 PDE4AP27815 886 aa11.94□□□□□ -0.5
TSPAN8-201ENST00000247829 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
TSPAN8-201ENST00000247829 CRISPLD2Q9H0B8 497 aa11.93□□□□□ -0.5
TSPAN8-201ENST00000247829 HOXB3P14651 431 aaPredicted RBP11.92□□□□□ -0.5
TSPAN8-201ENST00000247829 FOXK1P85037 733 aa11.9□□□□□ -0.5
TSPAN8-201ENST00000247829 DSG2Q14126 1118 aa11.9□□□□□ -0.5
TSPAN8-201ENST00000247829 LARP6Q9BRS8 491 aaKnown RBP11.9□□□□□ -0.5
TSPAN8-201ENST00000247829 ST18O60284 1047 aa11.88□□□□□ -0.51
TSPAN8-201ENST00000247829 PLPP6Q8IY26 295 aa11.88□□□□□ -0.51
TSPAN8-201ENST00000247829 DOK7Q18PE1 504 aa11.87□□□□□ -0.51
TSPAN8-201ENST00000247829 LCE2DQ5TA82 110 aaPredicted RBP11.87□□□□□ -0.51
TSPAN8-201ENST00000247829 ZNF710Q8N1W2 664 aa11.84□□□□□ -0.51
TSPAN8-201ENST00000247829 PPP1R15BQ5SWA1 713 aa11.83□□□□□ -0.52
TSPAN8-201ENST00000247829 DDX27Q96GQ7 796 aaKnown RBP11.83□□□□□ -0.52
TSPAN8-201ENST00000247829 MFSD10Q14728 455 aa11.82□□□□□ -0.52
TSPAN8-201ENST00000247829 RIMBP2O15034 1052 aa11.8□□□□□ -0.52
TSPAN8-201ENST00000247829 PRKCSHP14314 528 aaPredicted RBP11.8□□□□□ -0.52
TSPAN8-201ENST00000247829 SLC34A2O95436 690 aa11.79□□□□□ -0.52
TSPAN8-201ENST00000247829 ARSIQ5FYB1 569 aa11.78□□□□□ -0.52
TSPAN8-201ENST00000247829 GPR153Q6NV75 609 aa11.78□□□□□ -0.52
TSPAN8-201ENST00000247829 MARVELD3Q96A59 401 aa11.77□□□□□ -0.53
TSPAN8-201ENST00000247829 ZSWIM6Q9HCJ5 1215 aa11.77□□□□□ -0.53
TSPAN8-201ENST00000247829 HOXB1P14653 301 aaPredicted RBP11.76□□□□□ -0.53
TSPAN8-201ENST00000247829 PTCD2Q8WV60 388 aaKnown RBP11.75□□□□□ -0.53
TSPAN8-201ENST00000247829 KHSRPQ92945 711 aaKnown RBP eCLIP11.75□□□□□ -0.53
TSPAN8-201ENST00000247829 PCDHGA4Q9Y5G9 962 aa11.74□□□□□ -0.53
TSPAN8-201ENST00000247829 WDR70Q9NW82 654 aa11.73□□□□□ -0.53
TSPAN8-201ENST00000247829 UPF1Q92900 1129 aaKnown RBP eCLIP11.72□□□□□ -0.53
TSPAN8-201ENST00000247829 POTEMA6NI47 508 aa11.71□□□□□ -0.53
TSPAN8-201ENST00000247829 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.53
TSPAN8-201ENST00000247829 POTEGQ6S5H5 508 aa11.71□□□□□ -0.53
TSPAN8-201ENST00000247829 OXER1Q8TDS5 423 aa11.7□□□□□ -0.54
TSPAN8-201ENST00000247829 TBC1D12O60347 775 aa11.69□□□□□ -0.54
TSPAN8-201ENST00000247829 EMP3P54852 163 aa11.69□□□□□ -0.54
TSPAN8-201ENST00000247829 EMILIN3Q9NT22 766 aa11.69□□□□□ -0.54
TSPAN8-201ENST00000247829 NUDT7P0C024 238 aa11.68□□□□□ -0.54
TSPAN8-201ENST00000247829 CAMK2BQ13554 666 aa11.68□□□□□ -0.54
TSPAN8-201ENST00000247829 NBR1Q14596 966 aa11.67□□□□□ -0.54
TSPAN8-201ENST00000247829 FAM205CA6NFA0 338 aa11.65□□□□□ -0.54
TSPAN8-201ENST00000247829 E2F4Q16254 413 aa11.65□□□□□ -0.54
TSPAN8-201ENST00000247829 KDM4FA0A1W2PPD8 638 aa11.64□□□□□ -0.55
TSPAN8-201ENST00000247829 MAP3K9P80192 1104 aa11.64□□□□□ -0.55
TSPAN8-201ENST00000247829 ERBB3P21860 1342 aa11.63□□□□□ -0.55
TSPAN8-201ENST00000247829 POTEB3A0JP26 581 aa11.62□□□□□ -0.55
TSPAN8-201ENST00000247829 POTEBQ6S5H4 581 aa11.62□□□□□ -0.55
TSPAN8-201ENST00000247829 ZNF316A6NFI3 1004 aaPredicted RBP11.6□□□□□ -0.55
TSPAN8-201ENST00000247829 HS3ST6Q96QI5 342 aa11.6□□□□□ -0.55
TSPAN8-201ENST00000247829 LHX6Q9UPM6 363 aa11.6□□□□□ -0.55
TSPAN8-201ENST00000247829 DPYSL4O14531 572 aa11.59□□□□□ -0.55
TSPAN8-201ENST00000247829 EVI5O60447 810 aa11.58□□□□□ -0.56
TSPAN8-201ENST00000247829 VARS2Q5ST30 1063 aaKnown RBP11.58□□□□□ -0.56
TSPAN8-201ENST00000247829 ANO8Q9HCE9 1232 aaPredicted RBP11.56□□□□□ -0.56
TSPAN8-201ENST00000247829 CDAN1Q8IWY9 1227 aa11.54□□□□□ -0.56
TSPAN8-201ENST00000247829 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.57
TSPAN8-201ENST00000247829 ARIH1Q9Y4X5 557 aaPredicted RBP11.52□□□□□ -0.57
TSPAN8-201ENST00000247829 PSDA5PKW4 1024 aaPredicted RBP11.48□□□□□ -0.57
TSPAN8-201ENST00000247829 ZNF687Q8N1G0 1237 aa11.48□□□□□ -0.57
TSPAN8-201ENST00000247829 ARHGEF1Q92888 912 aaKnown RBP11.48□□□□□ -0.57
TSPAN8-201ENST00000247829 PCDH10Q9P2E7 1040 aa11.48□□□□□ -0.57
TSPAN8-201ENST00000247829 PDIA6Q15084 440 aa11.47□□□□□ -0.57
TSPAN8-201ENST00000247829 SPDYE16A6NNV3 312 aaPredicted RBP11.46□□□□□ -0.57
TSPAN8-201ENST00000247829 ZNF454Q8N9F8 522 aa11.46□□□□□ -0.57
TSPAN8-201ENST00000247829 FOSBP53539 338 aa11.45□□□□□ -0.58
TSPAN8-201ENST00000247829 P3H3Q8IVL6 736 aa11.45□□□□□ -0.58
TSPAN8-201ENST00000247829 PPP4R3BQ5MIZ7 849 aa11.44□□□□□ -0.58
TSPAN8-201ENST00000247829 DDX12PQ92771 950 aa11.43□□□□□ -0.58
TSPAN8-201ENST00000247829 PTGER2P43116 358 aa11.42□□□□□ -0.58
TSPAN8-201ENST00000247829 JPH4Q96JJ6 628 aa11.42□□□□□ -0.58
TSPAN8-201ENST00000247829 PCDHGA10Q9Y5H3 936 aa11.42□□□□□ -0.58
TSPAN8-201ENST00000247829 POTEEQ6S8J3 1075 aa11.41□□□□□ -0.58
TSPAN8-201ENST00000247829 KRTAP3-3Q9BYR6 98 aa11.41□□□□□ -0.58
TSPAN8-201ENST00000247829 KRTAP3-2Q9BYR7 98 aa11.41□□□□□ -0.58
TSPAN8-201ENST00000247829 AXIN2Q9Y2T1 843 aa11.4□□□□□ -0.58
TSPAN8-201ENST00000247829 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
TSPAN8-201ENST00000247829 PHF14O94880 888 aa11.38□□□□□ -0.59
TSPAN8-201ENST00000247829 GRXCR2A6NFK2 248 aa11.37□□□□□ -0.59
TSPAN8-201ENST00000247829 ARHGAP33O14559 1287 aa11.36□□□□□ -0.59
TSPAN8-201ENST00000247829 TYW1BQ6NUM6 668 aa11.36□□□□□ -0.59
TSPAN8-201ENST00000247829 ADAM33Q9BZ11 813 aa11.36□□□□□ -0.59
TSPAN8-201ENST00000247829 PBX2P40425 430 aa11.35□□□□□ -0.59
TSPAN8-201ENST00000247829 EPAS1Q99814 870 aa11.35□□□□□ -0.59
TSPAN8-201ENST00000247829 BCL2L12Q9HB09 334 aa11.35□□□□□ -0.59
TSPAN8-201ENST00000247829 PSEN2P49810 448 aa11.34□□□□□ -0.59
TSPAN8-201ENST00000247829 FBXW7Q969H0 707 aa11.34□□□□□ -0.59
TSPAN8-201ENST00000247829 SEMA3EO15041 775 aa11.33□□□□□ -0.6
TSPAN8-201ENST00000247829 MLLT3P42568 568 aaPredicted RBP11.33□□□□□ -0.6
TSPAN8-201ENST00000247829 KCNK17Q96T54 332 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms