RNA–Protein interactions for RNA: ENST00000247001.9

SUGP1-201, Transcript of SURP and G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUGP1, Length 2,423 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-201ENST00000247001 PTPN23Q9H3S7 1636 aa18.17■□□□□ 0.5
SUGP1-201ENST00000247001 CENPBP07199 599 aaPredicted RBP18.1■□□□□ 0.49
SUGP1-201ENST00000247001 CD109Q6YHK3 1445 aa18.1■□□□□ 0.49
SUGP1-201ENST00000247001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.09■□□□□ 0.492e-9■■□□□ 11.5
SUGP1-201ENST00000247001 ZNF777Q9ULD5 760 aaPredicted RBP18.09■□□□□ 0.49
SUGP1-201ENST00000247001 ZNF644Q9H582 1327 aaPredicted RBP18.09■□□□□ 0.49
SUGP1-201ENST00000247001 COL17A1Q9UMD9 1497 aaPredicted RBP18.07■□□□□ 0.48
SUGP1-201ENST00000247001 CHIC2Q9UKJ5 165 aa18.07■□□□□ 0.48
SUGP1-201ENST00000247001 CFDP1Q9UEE9 299 aaPredicted RBP18.07■□□□□ 0.48
SUGP1-201ENST00000247001 PTPRKQ15262 1439 aa18.06■□□□□ 0.48
SUGP1-201ENST00000247001 MIA2Q96PC5 1412 aa18.06■□□□□ 0.48
SUGP1-201ENST00000247001 PPRC1Q5VV67 1664 aaKnown RBP18.06■□□□□ 0.48
SUGP1-201ENST00000247001 ITSN2Q9NZM3 1697 aa18.06■□□□□ 0.48
SUGP1-201ENST00000247001 RAB3GAP2Q9H2M9 1393 aa18.06■□□□□ 0.48
SUGP1-201ENST00000247001 GLI2P10070 1586 aa18.06■□□□□ 0.48
SUGP1-201ENST00000247001 GPATCH8Q9UKJ3 1502 aaKnown RBP18.04■□□□□ 0.48
SUGP1-201ENST00000247001 CDC42BPAQ5VT25 1732 aa18.04■□□□□ 0.48
SUGP1-201ENST00000247001 TCOF1Q13428 1488 aaKnown RBP18.04■□□□□ 0.48
SUGP1-201ENST00000247001 SETD5Q9C0A6 1442 aa18.04■□□□□ 0.48
SUGP1-201ENST00000247001 BCL11AQ9H165 835 aa18.03■□□□□ 0.48
SUGP1-201ENST00000247001 MAP3K4Q9Y6R4 1608 aa18.03■□□□□ 0.48
SUGP1-201ENST00000247001 RAPGEF3O95398 923 aa18■□□□□ 0.47
SUGP1-201ENST00000247001 NEUROD1Q13562 356 aa18■□□□□ 0.47
SUGP1-201ENST00000247001 CAMSAP2Q08AD1 1489 aa18■□□□□ 0.47
SUGP1-201ENST00000247001 RRP7BPQ9NSQ0 103 aa18■□□□□ 0.47
SUGP1-201ENST00000247001 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18■□□□□ 0.47
SUGP1-201ENST00000247001 DHX57Q6P158 1386 aaKnown RBP17.98■□□□□ 0.47
SUGP1-201ENST00000247001 TTC37Q6PGP7 1564 aa17.98■□□□□ 0.47
SUGP1-201ENST00000247001 GTF3C3Q9Y5Q9 886 aa17.96■□□□□ 0.47
SUGP1-201ENST00000247001 KDM6BO15054 1643 aa17.95■□□□□ 0.46
SUGP1-201ENST00000247001 ABCA9Q8IUA7 1624 aa17.95■□□□□ 0.46
SUGP1-201ENST00000247001 DAPK1P53355 1430 aa17.95■□□□□ 0.46
SUGP1-201ENST00000247001 CDC42BPBQ9Y5S2 1711 aa17.95■□□□□ 0.46
SUGP1-201ENST00000247001 DNMT1P26358 1616 aaKnown RBP17.95■□□□□ 0.46
SUGP1-201ENST00000247001 HFM1A2PYH4 1435 aa17.93■□□□□ 0.46
SUGP1-201ENST00000247001 ABCC5O15440 1437 aa17.93■□□□□ 0.46
SUGP1-201ENST00000247001 PREX2Q70Z35 1606 aa17.92■□□□□ 0.46
SUGP1-201ENST00000247001 NAIPQ13075 1403 aa17.92■□□□□ 0.46
SUGP1-201ENST00000247001 MYO5CQ9NQX4 1742 aa17.92■□□□□ 0.46
SUGP1-201ENST00000247001 ARHGAP5Q13017 1502 aa17.91■□□□□ 0.46
SUGP1-201ENST00000247001 TEX14Q8IWB6 1497 aa17.91■□□□□ 0.46
SUGP1-201ENST00000247001 HNRNPMP52272 730 aaKnown RBP eCLIP17.89■□□□□ 0.45
SUGP1-201ENST00000247001 FANCAO15360 1455 aa17.88■□□□□ 0.45
SUGP1-201ENST00000247001 GCC2Q8IWJ2 1684 aa17.87■□□□□ 0.45
SUGP1-201ENST00000247001 SAMD9LQ8IVG5 1584 aa17.87■□□□□ 0.45
SUGP1-201ENST00000247001 PLCH2O75038 1416 aa17.87■□□□□ 0.45
SUGP1-201ENST00000247001 CROCC2H7BZ55 1655 aa17.86■□□□□ 0.45
SUGP1-201ENST00000247001 AKNAQ7Z591 1439 aa17.86■□□□□ 0.45
SUGP1-201ENST00000247001 AFAP1Q8N556 730 aa17.85■□□□□ 0.45
SUGP1-201ENST00000247001 EFCAB2Q5VUJ9 269 aa17.84■□□□□ 0.45
SUGP1-201ENST00000247001 TRIM52Q96A61 297 aa17.83■□□□□ 0.44
SUGP1-201ENST00000247001 ADGBQ8N7X0 1667 aa17.83■□□□□ 0.44
SUGP1-201ENST00000247001 SYCP2Q9BX26 1530 aa17.83■□□□□ 0.44
SUGP1-201ENST00000247001 SCAPERQ9BY12 1400 aa17.82■□□□□ 0.44
SUGP1-201ENST00000247001 ERICH6Q7L0X2 663 aa17.81■□□□□ 0.44
SUGP1-201ENST00000247001 TSPY4P0CV99 314 aa17.81■□□□□ 0.44
SUGP1-201ENST00000247001 TSPY10P0CW01 314 aa17.81■□□□□ 0.44
SUGP1-201ENST00000247001 ROCK1Q13464 1354 aa17.8■□□□□ 0.44
SUGP1-201ENST00000247001 CLSPNQ9HAW4 1339 aa17.8■□□□□ 0.44
SUGP1-201ENST00000247001 C9orf84Q5VXU9 1444 aa17.79■□□□□ 0.44
SUGP1-201ENST00000247001 ADGRL1O94910 1474 aa17.78■□□□□ 0.44
SUGP1-201ENST00000247001 NEO1Q92859 1461 aa17.78■□□□□ 0.44
SUGP1-201ENST00000247001 MBD5Q9P267 1494 aa17.78■□□□□ 0.44
SUGP1-201ENST00000247001 NCOA1Q15788 1441 aa17.78■□□□□ 0.44
SUGP1-201ENST00000247001 ARAP3Q8WWN8 1544 aa17.78■□□□□ 0.44
SUGP1-201ENST00000247001 MYT1LQ9UL68 1186 aa17.77■□□□□ 0.43
SUGP1-201ENST00000247001 ANKRD30AQ9BXX3 1397 aa17.77■□□□□ 0.43
SUGP1-201ENST00000247001 CCDC141Q6ZP82 1450 aa17.77■□□□□ 0.43
SUGP1-201ENST00000247001 ARHGEF12Q9NZN5 1544 aa17.76■□□□□ 0.43
SUGP1-201ENST00000247001 ARHGEF5Q12774 1597 aa17.76■□□□□ 0.43
SUGP1-201ENST00000247001 KDM4FA0A1W2PPD8 638 aa17.75■□□□□ 0.43
SUGP1-201ENST00000247001 SIN3AQ96ST3 1273 aa17.75■□□□□ 0.43
SUGP1-201ENST00000247001 DENND4BO75064 1496 aaPredicted RBP17.75■□□□□ 0.43
SUGP1-201ENST00000247001 DIEXFQ68CQ4 756 aaKnown RBP17.74■□□□□ 0.43
SUGP1-201ENST00000247001 FRMPD1Q5SYB0 1578 aa17.74■□□□□ 0.43
SUGP1-201ENST00000247001 TRAPPC8Q9Y2L5 1435 aa17.74■□□□□ 0.43
SUGP1-201ENST00000247001 ADGRL2O95490 1459 aa17.73■□□□□ 0.43
SUGP1-201ENST00000247001 SHANK2Q9UPX8 1470 aa17.73■□□□□ 0.43
SUGP1-201ENST00000247001 YEATS2Q9ULM3 1422 aa17.73■□□□□ 0.43
SUGP1-201ENST00000247001 PLEKHH2Q8IVE3 1493 aa17.71■□□□□ 0.43
SUGP1-201ENST00000247001 ABCC1P33527 1531 aa17.7■□□□□ 0.42
SUGP1-201ENST00000247001 KIF15Q9NS87 1388 aa17.7■□□□□ 0.42
SUGP1-201ENST00000247001 RSPH4AQ5TD94 716 aa17.69■□□□□ 0.42
SUGP1-201ENST00000247001 ANKRD50Q9ULJ7 1429 aa17.69■□□□□ 0.42
SUGP1-201ENST00000247001 KIAA1107Q9UPP5 1409 aa17.69■□□□□ 0.42
SUGP1-201ENST00000247001 ARID4BQ4LE39 1312 aaPredicted RBP17.69■□□□□ 0.42
SUGP1-201ENST00000247001 FOXD1Q16676 465 aa17.69■□□□□ 0.42
SUGP1-201ENST00000247001 MLECQ14165 292 aa17.68■□□□□ 0.42
SUGP1-201ENST00000247001 RICTORQ6R327 1708 aa17.68■□□□□ 0.42
SUGP1-201ENST00000247001 MPHOSPH9Q99550 1183 aa17.68■□□□□ 0.42
SUGP1-201ENST00000247001 POGZQ7Z3K3 1410 aa17.67■□□□□ 0.42
SUGP1-201ENST00000247001 SLC4A1APQ9BWU0 796 aaKnown RBP17.65■□□□□ 0.42
SUGP1-201ENST00000247001 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.42
SUGP1-201ENST00000247001 CFAP74Q9C0B2 1584 aa17.63■□□□□ 0.41
SUGP1-201ENST00000247001 MAST1Q9Y2H9 1570 aa17.62■□□□□ 0.41
SUGP1-201ENST00000247001 AEBP2Q6ZN18 517 aaPredicted RBP17.62■□□□□ 0.41
SUGP1-201ENST00000247001 SPAG9O60271 1321 aaKnown RBP17.62■□□□□ 0.41
SUGP1-201ENST00000247001 SIGLEC1Q9BZZ2 1709 aa17.6■□□□□ 0.41
SUGP1-201ENST00000247001 ZNF518AQ6AHZ1 1483 aa17.6■□□□□ 0.41
SUGP1-201ENST00000247001 NUP155O75694 1391 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms