RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 ZBED9Q6R2W3 1325 aa25.38■■□□□ 1.65
CHPF-201ENST00000243776 SAMD9Q5K651 1589 aa25.38■■□□□ 1.65
CHPF-201ENST00000243776 NBR1Q14596 966 aa25.37■■□□□ 1.65
CHPF-201ENST00000243776 NCOA1Q15788 1441 aa25.37■■□□□ 1.65
CHPF-201ENST00000243776 AKNAQ7Z591 1439 aa25.35■■□□□ 1.65
CHPF-201ENST00000243776 ERICH6BQ5W0A0 696 aa25.31■■□□□ 1.64
CHPF-201ENST00000243776 ZNF777Q9ULD5 760 aaPredicted RBP25.31■■□□□ 1.64
CHPF-201ENST00000243776 PAK3O75914 559 aaPredicted RBP25.3■■□□□ 1.64
CHPF-201ENST00000243776 ANKRD30BQ9BXX2 1392 aa25.29■■□□□ 1.64
CHPF-201ENST00000243776 EPRSP07814 1512 aaKnown RBP25.28■■□□□ 1.64
CHPF-201ENST00000243776 ARHGEF11O15085 1522 aa25.26■■□□□ 1.63
CHPF-201ENST00000243776 HECW1Q76N89 1606 aa25.26■■□□□ 1.63
CHPF-201ENST00000243776 CCDC136Q96JN2 1154 aa25.26■■□□□ 1.63
CHPF-201ENST00000243776 SALL2Q9Y467 1007 aaPredicted RBP25.26■■□□□ 1.63
CHPF-201ENST00000243776 TCOF1Q13428 1488 aaKnown RBP25.25■■□□□ 1.63
CHPF-201ENST00000243776 THOC2Q8NI27 1593 aaKnown RBP25.23■■□□□ 1.63
CHPF-201ENST00000243776 DEKP35659 375 aaKnown RBP25.23■■□□□ 1.63
CHPF-201ENST00000243776 LAMC3Q9Y6N6 1575 aa25.22■■□□□ 1.63
CHPF-201ENST00000243776 GCC2Q8IWJ2 1684 aa25.22■■□□□ 1.63
CHPF-201ENST00000243776 ABCA5Q8WWZ7 1642 aa25.22■■□□□ 1.63
CHPF-201ENST00000243776 RPRD2Q5VT52 1461 aaKnown RBP25.2■■□□□ 1.62
CHPF-201ENST00000243776 NOP58Q9Y2X3 529 aaKnown RBP25.19■■□□□ 1.62
CHPF-201ENST00000243776 DAPK1P53355 1430 aa25.18■■□□□ 1.62
CHPF-201ENST00000243776 KDM2AQ9Y2K7 1162 aa25.18■■□□□ 1.62
CHPF-201ENST00000243776 ABCC5O15440 1437 aa25.17■■□□□ 1.62
CHPF-201ENST00000243776 SPATA31E1Q6ZUB1 1445 aa25.17■■□□□ 1.62
CHPF-201ENST00000243776 TEX14Q8IWB6 1497 aa25.17■■□□□ 1.62
CHPF-201ENST00000243776 NUDCQ9Y266 331 aa25.16■■□□□ 1.62
CHPF-201ENST00000243776 TMC1Q8TDI8 760 aa25.16■■□□□ 1.62
CHPF-201ENST00000243776 PKD2Q13563 968 aa25.15■■□□□ 1.62
CHPF-201ENST00000243776 MIA2Q96PC5 1412 aa25.15■■□□□ 1.62
CHPF-201ENST00000243776 USP47Q96K76 1375 aa25.13■■□□□ 1.61
CHPF-201ENST00000243776 PDS5BQ9NTI5 1447 aa25.13■■□□□ 1.61
CHPF-201ENST00000243776 DHX29Q7Z478 1369 aaKnown RBP25.12■■□□□ 1.61
CHPF-201ENST00000243776 NPM2Q86SE8 214 aaKnown RBP25.11■■□□□ 1.61
CHPF-201ENST00000243776 CFDP1Q9UEE9 299 aaPredicted RBP25.11■■□□□ 1.61
CHPF-201ENST00000243776 SMG6Q86US8 1419 aaKnown RBP25.07■■□□□ 1.6
CHPF-201ENST00000243776 IQGAP2Q13576 1575 aa25.06■■□□□ 1.6
CHPF-201ENST00000243776 PNISRQ8TF01 805 aaKnown RBP25.06■■□□□ 1.6
CHPF-201ENST00000243776 CARD11Q9BXL7 1154 aa25.05■■□□□ 1.6
CHPF-201ENST00000243776 ANP32AP39687 249 aaKnown RBP25.04■■□□□ 1.6
CHPF-201ENST00000243776 WDR62O43379 1518 aa25.03■■□□□ 1.6
CHPF-201ENST00000243776 PRG4Q92954 1404 aaPredicted RBP25.02■■□□□ 1.6
CHPF-201ENST00000243776 ROCK1Q13464 1354 aa25.02■■□□□ 1.6
CHPF-201ENST00000243776 ST20-MTHFSA0A0A6YYL1 179 aa25.01■■□□□ 1.59
CHPF-201ENST00000243776 BCORL1Q5H9F3 1711 aa25■■□□□ 1.59
CHPF-201ENST00000243776 PZPP20742 1482 aa25■■□□□ 1.59
CHPF-201ENST00000243776 EXOC6Q8TAG9 804 aa24.99■■□□□ 1.59
CHPF-201ENST00000243776 ZBTB47Q9UFB7 747 aaPredicted RBP24.98■■□□□ 1.59
CHPF-201ENST00000243776 KIF21AQ7Z4S6 1674 aa24.97■■□□□ 1.59
CHPF-201ENST00000243776 FBLN2P98095 1184 aa24.97■■□□□ 1.59
CHPF-201ENST00000243776 IPO9Q96P70 1041 aaKnown RBP24.97■■□□□ 1.59
CHPF-201ENST00000243776 TARBP1Q13395 1621 aaKnown RBP24.96■■□□□ 1.59
CHPF-201ENST00000243776 DCAF11Q8TEB1 546 aa24.96■■□□□ 1.59
CHPF-201ENST00000243776 SKAP1Q86WV1 359 aa24.94■■□□□ 1.58
CHPF-201ENST00000243776 NUP153P49790 1475 aaKnown RBP24.94■■□□□ 1.58
CHPF-201ENST00000243776 RNF123Q5XPI4 1314 aa24.93■■□□□ 1.58
CHPF-201ENST00000243776 DNMT1P26358 1616 aaKnown RBP24.93■■□□□ 1.58
CHPF-201ENST00000243776 KIAA1107Q9UPP5 1409 aa24.91■■□□□ 1.58
CHPF-201ENST00000243776 NUP155O75694 1391 aa24.91■■□□□ 1.58
CHPF-201ENST00000243776 ZNF608Q9ULD9 1512 aaPredicted RBP24.89■■□□□ 1.58
CHPF-201ENST00000243776 PLIN1O60240 522 aa24.88■■□□□ 1.57
CHPF-201ENST00000243776 RGL3Q3MIN7 710 aa24.88■■□□□ 1.57
CHPF-201ENST00000243776 RTL5Q5HYW3 569 aaPredicted RBP24.88■■□□□ 1.57
CHPF-201ENST00000243776 CDCA7LQ96GN5 454 aa24.88■■□□□ 1.57
CHPF-201ENST00000243776 LAS1LQ9Y4W2 734 aaKnown RBP24.88■■□□□ 1.57
CHPF-201ENST00000243776 CAMSAP2Q08AD1 1489 aa24.88■■□□□ 1.57
CHPF-201ENST00000243776 PBRM1Q86U86 1689 aa24.87■■□□□ 1.57
CHPF-201ENST00000243776 RRP1P56182 461 aaKnown RBP24.87■■□□□ 1.57
CHPF-201ENST00000243776 MYT1LQ9UL68 1186 aa24.86■■□□□ 1.57
CHPF-201ENST00000243776 RCAN3Q9UKA8 241 aa24.85■■□□□ 1.57
CHPF-201ENST00000243776 ADAMTS12P58397 1594 aa24.85■■□□□ 1.57
CHPF-201ENST00000243776 DISP1Q96F81 1524 aa24.84■■□□□ 1.57
CHPF-201ENST00000243776 CC2D1BQ5T0F9 858 aaKnown RBP24.83■■□□□ 1.57
CHPF-201ENST00000243776 PLB1Q6P1J6 1458 aa24.83■■□□□ 1.57
CHPF-201ENST00000243776 MBD5Q9P267 1494 aa24.83■■□□□ 1.56
CHPF-201ENST00000243776 KIF15Q9NS87 1388 aa24.82■■□□□ 1.56
CHPF-201ENST00000243776 ANKRD50Q9ULJ7 1429 aa24.82■■□□□ 1.56
CHPF-201ENST00000243776 MYBBP1AQ9BQG0 1328 aaKnown RBP24.82■■□□□ 1.56
CHPF-201ENST00000243776 POLR1AO95602 1720 aaPredicted RBP24.81■■□□□ 1.56
CHPF-201ENST00000243776 ANKRD30AQ9BXX3 1397 aa24.81■■□□□ 1.56
CHPF-201ENST00000243776 HNRNPMP52272 730 aaKnown RBP eCLIP24.81■■□□□ 1.56
CHPF-201ENST00000243776 GPATCH8Q9UKJ3 1502 aaKnown RBP24.79■■□□□ 1.56
CHPF-201ENST00000243776 KDM5CP41229 1560 aa24.79■■□□□ 1.56
CHPF-201ENST00000243776 NBPF1Q3BBV0 1214 aa24.78■■□□□ 1.56
CHPF-201ENST00000243776 TROQ12816 1431 aaPredicted RBP24.78■■□□□ 1.56
CHPF-201ENST00000243776 PDE4AP27815 886 aa24.77■■□□□ 1.56
CHPF-201ENST00000243776 ROCK2O75116 1388 aaKnown RBP24.76■■□□□ 1.55
CHPF-201ENST00000243776 CHMP7Q8WUX9 453 aaPredicted RBP24.76■■□□□ 1.55
CHPF-201ENST00000243776 KIAA0556O60303 1618 aa24.76■■□□□ 1.55
CHPF-201ENST00000243776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.75■■□□□ 1.55
CHPF-201ENST00000243776 KIF14Q15058 1648 aa24.75■■□□□ 1.55
CHPF-201ENST00000243776 RAPGEF6Q8TEU7 1601 aa24.75■■□□□ 1.55
CHPF-201ENST00000243776 TSPY4P0CV99 314 aa24.75■■□□□ 1.55
CHPF-201ENST00000243776 TSPY10P0CW01 314 aa24.75■■□□□ 1.55
CHPF-201ENST00000243776 RALBP1Q15311 655 aa24.74■■□□□ 1.55
CHPF-201ENST00000243776 ARID4BQ4LE39 1312 aaPredicted RBP24.73■■□□□ 1.55
CHPF-201ENST00000243776 KIAA0586Q9BVV6 1533 aa24.73■■□□□ 1.55
CHPF-201ENST00000243776 LRPPRCP42704 1394 aaKnown RBP24.73■■□□□ 1.55
CHPF-201ENST00000243776 RTN4Q9NQC3 1192 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms