RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 FRMPD1Q5SYB0 1578 aa16.63■□□□□ 0.25
NDUFB3-201ENST00000237889 ESF1Q9H501 851 aaKnown RBP16.62■□□□□ 0.25
NDUFB3-201ENST00000237889 EFCAB5A4FU69 1503 aa16.61■□□□□ 0.25
NDUFB3-201ENST00000237889 ZFYVE16Q7Z3T8 1539 aa16.6■□□□□ 0.25
NDUFB3-201ENST00000237889 TTC37Q6PGP7 1564 aa16.58■□□□□ 0.24
NDUFB3-201ENST00000237889 ATP10AO60312 1499 aa16.55■□□□□ 0.24
NDUFB3-201ENST00000237889 ZMYM4Q5VZL5 1548 aa16.55■□□□□ 0.24
NDUFB3-201ENST00000237889 PREX1Q8TCU6 1659 aa16.54■□□□□ 0.24
NDUFB3-201ENST00000237889 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
NDUFB3-201ENST00000237889 C9orf84Q5VXU9 1444 aa16.53■□□□□ 0.24
NDUFB3-201ENST00000237889 ARHGEF12Q9NZN5 1544 aa16.52■□□□□ 0.24
NDUFB3-201ENST00000237889 SCAPERQ9BY12 1400 aa16.52■□□□□ 0.23
NDUFB3-201ENST00000237889 CFAP74Q9C0B2 1584 aa16.51■□□□□ 0.23
NDUFB3-201ENST00000237889 LTBP4Q8N2S1 1624 aa16.5■□□□□ 0.23
NDUFB3-201ENST00000237889 FER1L4A9Z1Z3 1794 aa16.49■□□□□ 0.23
NDUFB3-201ENST00000237889 EFCAB2Q5VUJ9 269 aa16.49■□□□□ 0.23
NDUFB3-201ENST00000237889 RICTORQ6R327 1708 aa16.49■□□□□ 0.23
NDUFB3-201ENST00000237889 STRCQ7RTU9 1775 aa16.49■□□□□ 0.23
NDUFB3-201ENST00000237889 SCAF1Q9H7N4 1312 aaKnown RBP16.48■□□□□ 0.23
NDUFB3-201ENST00000237889 TRAPPC8Q9Y2L5 1435 aa16.48■□□□□ 0.23
NDUFB3-201ENST00000237889 CTTNBP2Q8WZ74 1663 aa16.48■□□□□ 0.23
NDUFB3-201ENST00000237889 TOM1O60784 492 aa16.46■□□□□ 0.23
NDUFB3-201ENST00000237889 SETD1BQ9UPS6 1966 aaKnown RBP16.46■□□□□ 0.22
NDUFB3-201ENST00000237889 HECW1Q76N89 1606 aa16.45■□□□□ 0.22
NDUFB3-201ENST00000237889 NCOA1Q15788 1441 aa16.44■□□□□ 0.22
NDUFB3-201ENST00000237889 HSPA1LP34931 641 aa16.43■□□□□ 0.22
NDUFB3-201ENST00000237889 PKD2Q13563 968 aa16.43■□□□□ 0.22
NDUFB3-201ENST00000237889 RAPGEF6Q8TEU7 1601 aa16.43■□□□□ 0.22
NDUFB3-201ENST00000237889 PLCH2O75038 1416 aa16.43■□□□□ 0.22
NDUFB3-201ENST00000237889 ZNF335Q9H4Z2 1342 aaPredicted RBP16.43■□□□□ 0.22
NDUFB3-201ENST00000237889 NUP153P49790 1475 aaKnown RBP16.42■□□□□ 0.22
NDUFB3-201ENST00000237889 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
NDUFB3-201ENST00000237889 PIP4K2BP78356 416 aa16.42■□□□□ 0.22
NDUFB3-201ENST00000237889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.4■□□□□ 0.221e-6■■■□□ 14.8
NDUFB3-201ENST00000237889 NCKAP5LQ9HCH0 1330 aa16.39■□□□□ 0.21
NDUFB3-201ENST00000237889 RANGAP1P46060 587 aaPredicted RBP16.38■□□□□ 0.21
NDUFB3-201ENST00000237889 AFAP1Q8N556 730 aa16.38■□□□□ 0.21
NDUFB3-201ENST00000237889 CDK11AQ9UQ88 783 aaPredicted RBP16.38■□□□□ 0.21
NDUFB3-201ENST00000237889 CNTLNQ9NXG0 1405 aa16.36■□□□□ 0.21
NDUFB3-201ENST00000237889 SIGLEC1Q9BZZ2 1709 aa16.36■□□□□ 0.21
NDUFB3-201ENST00000237889 ZNF518AQ6AHZ1 1483 aa16.35■□□□□ 0.21
NDUFB3-201ENST00000237889 MED1Q15648 1581 aaPredicted RBP16.34■□□□□ 0.21
NDUFB3-201ENST00000237889 NPATQ14207 1427 aa16.31■□□□□ 0.2
NDUFB3-201ENST00000237889 CAMSAP1Q5T5Y3 1602 aa16.3■□□□□ 0.2
NDUFB3-201ENST00000237889 ATP1B4Q9UN42 357 aaPredicted RBP16.29■□□□□ 0.2
NDUFB3-201ENST00000237889 SAMD9Q5K651 1589 aa16.29■□□□□ 0.2
NDUFB3-201ENST00000237889 CSRNP3Q8WYN3 585 aa16.28■□□□□ 0.2
NDUFB3-201ENST00000237889 ZMYM3Q14202 1370 aa16.27■□□□□ 0.2
NDUFB3-201ENST00000237889 AGLP35573 1532 aa16.27■□□□□ 0.2
NDUFB3-201ENST00000237889 PLA2R1Q13018 1463 aa16.25■□□□□ 0.19
NDUFB3-201ENST00000237889 MLH3Q9UHC1 1453 aa16.24■□□□□ 0.19
NDUFB3-201ENST00000237889 PTPRKQ15262 1439 aa16.24■□□□□ 0.19
NDUFB3-201ENST00000237889 REREQ9P2R6 1566 aa16.23■□□□□ 0.19
NDUFB3-201ENST00000237889 C3P01024 1663 aa16.23■□□□□ 0.19
NDUFB3-201ENST00000237889 ARHGAP5Q13017 1502 aa16.2■□□□□ 0.18
NDUFB3-201ENST00000237889 KDM5CP41229 1560 aa16.19■□□□□ 0.18
NDUFB3-201ENST00000237889 TCOF1Q13428 1488 aaKnown RBP16.19■□□□□ 0.18
NDUFB3-201ENST00000237889 CPS1P31327 1500 aa16.19■□□□□ 0.18
NDUFB3-201ENST00000237889 DIP2CQ9Y2E4 1556 aa16.17■□□□□ 0.18
NDUFB3-201ENST00000237889 CLIP1P30622 1438 aa16.17■□□□□ 0.18
NDUFB3-201ENST00000237889 CDK13Q14004 1512 aaKnown RBP16.14■□□□□ 0.18
NDUFB3-201ENST00000237889 ANKLE2Q86XL3 938 aa16.14■□□□□ 0.17
NDUFB3-201ENST00000237889 SHANK2Q9UPX8 1470 aa16.14■□□□□ 0.17
NDUFB3-201ENST00000237889 GGT6Q6P531 493 aa16.12■□□□□ 0.17
NDUFB3-201ENST00000237889 RGS17Q9UGC6 210 aaPredicted RBP16.11■□□□□ 0.17
NDUFB3-201ENST00000237889 SPAG9O60271 1321 aaKnown RBP16.11■□□□□ 0.17
NDUFB3-201ENST00000237889 TROQ12816 1431 aaPredicted RBP16.11■□□□□ 0.17
NDUFB3-201ENST00000237889 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
NDUFB3-201ENST00000237889 MYO5CQ9NQX4 1742 aa16.1■□□□□ 0.17
NDUFB3-201ENST00000237889 FMN1Q68DA7 1419 aa16.1■□□□□ 0.17
NDUFB3-201ENST00000237889 CEP170BQ9Y4F5 1589 aaPredicted RBP16.09■□□□□ 0.17
NDUFB3-201ENST00000237889 ABCA6Q8N139 1617 aa16.08■□□□□ 0.16
NDUFB3-201ENST00000237889 KIF14Q15058 1648 aa16.07■□□□□ 0.16
NDUFB3-201ENST00000237889 A2ML1A8K2U0 1454 aa16.06■□□□□ 0.16
NDUFB3-201ENST00000237889 ZNF777Q9ULD5 760 aaPredicted RBP16.06■□□□□ 0.16
NDUFB3-201ENST00000237889 MROH2AA6NES4 1674 aa16.05■□□□□ 0.16
NDUFB3-201ENST00000237889 POTEAQ6S8J7 498 aa16.02■□□□□ 0.16
NDUFB3-201ENST00000237889 EEA1Q15075 1411 aa16.02■□□□□ 0.15
NDUFB3-201ENST00000237889 MYO3AQ8NEV4 1616 aa16.01■□□□□ 0.15
NDUFB3-201ENST00000237889 ZNF142P52746 1687 aaPredicted RBP16■□□□□ 0.15
NDUFB3-201ENST00000237889 HNRNPMP52272 730 aaKnown RBP eCLIP15.99■□□□□ 0.15
NDUFB3-201ENST00000237889 TNRQ92752 1358 aa15.99■□□□□ 0.15
NDUFB3-201ENST00000237889 ABCC1P33527 1531 aa15.99■□□□□ 0.15
NDUFB3-201ENST00000237889 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.98■□□□□ 0.15
NDUFB3-201ENST00000237889 NPHP4O75161 1426 aaPredicted RBP15.97■□□□□ 0.15
NDUFB3-201ENST00000237889 UBTFP17480 764 aaKnown RBP15.97■□□□□ 0.15
NDUFB3-201ENST00000237889 A2MP01023 1474 aa15.97■□□□□ 0.15
NDUFB3-201ENST00000237889 SUPT6HQ7KZ85 1726 aaKnown RBP15.95■□□□□ 0.14
NDUFB3-201ENST00000237889 FBXO31Q5XUX0 539 aaPredicted RBP15.95■□□□□ 0.14
NDUFB3-201ENST00000237889 KIDINS220Q9ULH0 1771 aa15.95■□□□□ 0.14
NDUFB3-201ENST00000237889 DNMT1P26358 1616 aaKnown RBP15.94■□□□□ 0.14
NDUFB3-201ENST00000237889 FAM135AQ9P2D6 1515 aa15.93■□□□□ 0.14
NDUFB3-201ENST00000237889 CFDP1Q9UEE9 299 aaPredicted RBP15.92■□□□□ 0.14
NDUFB3-201ENST00000237889 CLTCQ00610 1675 aaKnown RBP15.92■□□□□ 0.14
NDUFB3-201ENST00000237889 WASHC2CQ9Y4E1 1318 aa15.92■□□□□ 0.14
NDUFB3-201ENST00000237889 SAMD9LQ8IVG5 1584 aa15.92■□□□□ 0.14
NDUFB3-201ENST00000237889 MED14O60244 1454 aa15.91■□□□□ 0.14
NDUFB3-201ENST00000237889 LRRC7Q96NW7 1537 aa15.91■□□□□ 0.14
NDUFB3-201ENST00000237889 KIAA1107Q9UPP5 1409 aa15.91■□□□□ 0.14
NDUFB3-201ENST00000237889 VWDEQ8N2E2 1590 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms