RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 A0A0G2JS52 829 aa15.05■□□□□ -0
NOD1-201ENST00000222823 POLA1P09884 1462 aaPredicted RBP15.05■□□□□ -0
NOD1-201ENST00000222823 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
NOD1-201ENST00000222823 POGKQ9P215 609 aa15.04■□□□□ -0
NOD1-201ENST00000222823 BECN1Q14457 450 aa15.03■□□□□ -0
NOD1-201ENST00000222823 NUDCQ9Y266 331 aa15.03■□□□□ -0
NOD1-201ENST00000222823 UACAQ9BZF9 1416 aa15.03■□□□□ -0
NOD1-201ENST00000222823 DDRGK1Q96HY6 314 aa15.02□□□□□ -0.01
NOD1-201ENST00000222823 CARMIL2Q6F5E8 1435 aa15.01□□□□□ -0.01
NOD1-201ENST00000222823 MAPK8IP3Q9UPT6 1336 aa15.01□□□□□ -0.01
NOD1-201ENST00000222823 ABCA10Q8WWZ4 1543 aa15□□□□□ -0.01
NOD1-201ENST00000222823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15□□□□□ -0.01
NOD1-201ENST00000222823 FOXD1Q16676 465 aa15□□□□□ -0.01
NOD1-201ENST00000222823 CC2D1BQ5T0F9 858 aaKnown RBP15□□□□□ -0.01
NOD1-201ENST00000222823 FTSJ3Q8IY81 847 aaKnown RBP15□□□□□ -0.01
NOD1-201ENST00000222823 TNNT2P45379 298 aaPredicted RBP15□□□□□ -0.01
NOD1-201ENST00000222823 PPP4R2Q9NY27 417 aa15□□□□□ -0.01
NOD1-201ENST00000222823 L3MBTL2Q969R5 705 aa14.99□□□□□ -0.01
NOD1-201ENST00000222823 NCOA2Q15596 1464 aa14.99□□□□□ -0.01
NOD1-201ENST00000222823 NESP48681 1621 aa14.99□□□□□ -0.01
NOD1-201ENST00000222823 TMF1P82094 1093 aa14.99□□□□□ -0.01
NOD1-201ENST00000222823 LAS1LQ9Y4W2 734 aaKnown RBP14.96□□□□□ -0.01
NOD1-201ENST00000222823 FRAT1Q92837 279 aaPredicted RBP14.95□□□□□ -0.02
NOD1-201ENST00000222823 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.023e-6■■■■□ 21.1
NOD1-201ENST00000222823 ANKRD30AQ9BXX3 1397 aa14.95□□□□□ -0.02
NOD1-201ENST00000222823 PKD2Q13563 968 aa14.95□□□□□ -0.02
NOD1-201ENST00000222823 PCF11O94913 1555 aaKnown RBP14.94□□□□□ -0.02
NOD1-201ENST00000222823 U2SURPO15042 1029 aaKnown RBP14.94□□□□□ -0.02
NOD1-201ENST00000222823 RGS3P49796 1198 aa14.93□□□□□ -0.02
NOD1-201ENST00000222823 HAP1P54257 671 aaPredicted RBP14.93□□□□□ -0.02
NOD1-201ENST00000222823 CUL7Q14999 1698 aa14.93□□□□□ -0.02
NOD1-201ENST00000222823 HFM1A2PYH4 1435 aa14.92□□□□□ -0.02
NOD1-201ENST00000222823 KANK1Q14678 1352 aa14.91□□□□□ -0.02
NOD1-201ENST00000222823 ERICH6BQ5W0A0 696 aa14.91□□□□□ -0.02
NOD1-201ENST00000222823 LMOD2Q6P5Q4 547 aa14.91□□□□□ -0.02
NOD1-201ENST00000222823 B4GALNT3Q6L9W6 998 aa14.91□□□□□ -0.02
NOD1-201ENST00000222823 ANP32EQ9BTT0 268 aa14.91□□□□□ -0.02
NOD1-201ENST00000222823 EHBP1L1Q8N3D4 1523 aa14.91□□□□□ -0.02
NOD1-201ENST00000222823 GOLGA6L22H0YM25 854 aa14.91□□□□□ -0.02
NOD1-201ENST00000222823 TSHZ2Q9NRE2 1034 aa14.9□□□□□ -0.02
NOD1-201ENST00000222823 AEBP2Q6ZN18 517 aaPredicted RBP14.9□□□□□ -0.02
NOD1-201ENST00000222823 NCLP19338 710 aaKnown RBP14.89□□□□□ -0.03
NOD1-201ENST00000222823 GGT6Q6P531 493 aa14.88□□□□□ -0.03
NOD1-201ENST00000222823 NUP155O75694 1391 aa14.88□□□□□ -0.03
NOD1-201ENST00000222823 LAMC3Q9Y6N6 1575 aa14.87□□□□□ -0.03
NOD1-201ENST00000222823 MS4A1P11836 297 aa14.87□□□□□ -0.03
NOD1-201ENST00000222823 GRIN2BQ13224 1484 aa14.87□□□□□ -0.03
NOD1-201ENST00000222823 SRPK2P78362 688 aaKnown RBP14.86□□□□□ -0.03
NOD1-201ENST00000222823 WDR97A6NE52 1622 aa14.86□□□□□ -0.03
NOD1-201ENST00000222823 MLECQ14165 292 aa14.86□□□□□ -0.03
NOD1-201ENST00000222823 JPH4Q96JJ6 628 aa14.86□□□□□ -0.03
NOD1-201ENST00000222823 CHMP4BQ9H444 224 aaKnown RBP14.86□□□□□ -0.03
NOD1-201ENST00000222823 CASC1Q6TDU7 716 aa14.86□□□□□ -0.03
NOD1-201ENST00000222823 PNNQ9H307 717 aaKnown RBP14.86□□□□□ -0.03
NOD1-201ENST00000222823 SAFB2Q14151 953 aaKnown RBP eCLIP14.85□□□□□ -0.03
NOD1-201ENST00000222823 MORC1Q86VD1 984 aa14.85□□□□□ -0.03
NOD1-201ENST00000222823 SUPT6HQ7KZ85 1726 aaKnown RBP14.84□□□□□ -0.03
NOD1-201ENST00000222823 EFCAB2Q5VUJ9 269 aa14.84□□□□□ -0.03
NOD1-201ENST00000222823 MIA2Q96PC5 1412 aa14.84□□□□□ -0.03
NOD1-201ENST00000222823 HDGFP51858 240 aaKnown RBP14.84□□□□□ -0.03
NOD1-201ENST00000222823 TRIM44Q96DX7 344 aaPredicted RBP14.83□□□□□ -0.04
NOD1-201ENST00000222823 RBM19Q9Y4C8 960 aaKnown RBP14.83□□□□□ -0.04
NOD1-201ENST00000222823 PRKRIP1Q9H875 184 aaPredicted RBP14.82□□□□□ -0.04
NOD1-201ENST00000222823 HECW1Q76N89 1606 aa14.81□□□□□ -0.04
NOD1-201ENST00000222823 NAIPQ13075 1403 aa14.81□□□□□ -0.04
NOD1-201ENST00000222823 RSPH4AQ5TD94 716 aa14.81□□□□□ -0.04
NOD1-201ENST00000222823 SOX12O15370 315 aa14.8□□□□□ -0.04
NOD1-201ENST00000222823 ROCK2O75116 1388 aaKnown RBP14.79□□□□□ -0.04
NOD1-201ENST00000222823 TRHP20396 242 aaPredicted RBP14.79□□□□□ -0.04
NOD1-201ENST00000222823 STK26Q9P289 416 aa14.79□□□□□ -0.04
NOD1-201ENST00000222823 MRC2Q9UBG0 1479 aa14.79□□□□□ -0.04
NOD1-201ENST00000222823 KTN1Q86UP2 1357 aaKnown RBP14.78□□□□□ -0.04
NOD1-201ENST00000222823 GLIPR1L2Q4G1C9 344 aa14.78□□□□□ -0.04
NOD1-201ENST00000222823 ZNF644Q9H582 1327 aaPredicted RBP14.78□□□□□ -0.04
NOD1-201ENST00000222823 MAPKBP1O60336 1514 aa14.77□□□□□ -0.04
NOD1-201ENST00000222823 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.05
NOD1-201ENST00000222823 PRDM2Q13029 1718 aa14.77□□□□□ -0.05
NOD1-201ENST00000222823 RALBP1Q15311 655 aa14.76□□□□□ -0.05
NOD1-201ENST00000222823 CCDC7Q96M83 1385 aa14.76□□□□□ -0.05
NOD1-201ENST00000222823 NOP58Q9Y2X3 529 aaKnown RBP14.76□□□□□ -0.05
NOD1-201ENST00000222823 WASHC2AQ641Q2 1341 aa14.76□□□□□ -0.05
NOD1-201ENST00000222823 HNRNPMP52272 730 aaKnown RBP eCLIP14.76□□□□□ -0.05
NOD1-201ENST00000222823 CNTLNQ9NXG0 1405 aa14.76□□□□□ -0.05
NOD1-201ENST00000222823 IFT140Q96RY7 1462 aa14.75□□□□□ -0.05
NOD1-201ENST00000222823 EPRSP07814 1512 aaKnown RBP14.75□□□□□ -0.05
NOD1-201ENST00000222823 OS9Q13438 667 aaPredicted RBP14.74□□□□□ -0.05
NOD1-201ENST00000222823 IQGAP2Q13576 1575 aa14.74□□□□□ -0.05
NOD1-201ENST00000222823 USP47Q96K76 1375 aa14.73□□□□□ -0.05
NOD1-201ENST00000222823 KIF3BO15066 747 aa14.73□□□□□ -0.05
NOD1-201ENST00000222823 ZBED9Q6R2W3 1325 aa14.73□□□□□ -0.05
NOD1-201ENST00000222823 HDGFL2Q7Z4V5 671 aaPredicted RBP14.73□□□□□ -0.05
NOD1-201ENST00000222823 ZRSR1Q15695 479 aaKnown RBP14.73□□□□□ -0.05
NOD1-201ENST00000222823 PTPN23Q9H3S7 1636 aa14.73□□□□□ -0.05
NOD1-201ENST00000222823 U2AF1L5P0DN76 240 aaPredicted RBP14.72□□□□□ -0.05
NOD1-201ENST00000222823 U2AF1Q01081 240 aaKnown RBP eCLIP14.72□□□□□ -0.05
NOD1-201ENST00000222823 CFAP43Q8NDM7 1665 aa14.72□□□□□ -0.05
NOD1-201ENST00000222823 TPRNQ4KMQ1 711 aa14.71□□□□□ -0.05
NOD1-201ENST00000222823 PTMAP06454 111 aaKnown RBP14.71□□□□□ -0.06
NOD1-201ENST00000222823 RCAN3Q9UKA8 241 aa14.71□□□□□ -0.06
NOD1-201ENST00000222823 KIF7Q2M1P5 1343 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms