RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 NCOA2Q15596 1464 aa14.67□□□□□ -0.06
USP11-201ENST00000218348 ITSN2Q9NZM3 1697 aa14.65□□□□□ -0.06
USP11-201ENST00000218348 ZNF316A6NFI3 1004 aaPredicted RBP14.64□□□□□ -0.07
USP11-201ENST00000218348 PHLDB1Q86UU1 1377 aa14.64□□□□□ -0.07
USP11-201ENST00000218348 GPATCH8Q9UKJ3 1502 aaKnown RBP14.64□□□□□ -0.07
USP11-201ENST00000218348 YTHDC1Q96MU7 727 aaKnown RBP14.63□□□□□ -0.07
USP11-201ENST00000218348 SAMD9LQ8IVG5 1584 aa14.61□□□□□ -0.07
USP11-201ENST00000218348 TCOF1Q13428 1488 aaKnown RBP14.61□□□□□ -0.07
USP11-201ENST00000218348 NEUROD1Q13562 356 aa14.61□□□□□ -0.07
USP11-201ENST00000218348 DHX57Q6P158 1386 aaKnown RBP14.58□□□□□ -0.08
USP11-201ENST00000218348 RRBP1Q9P2E9 1410 aaKnown RBP14.58□□□□□ -0.08
USP11-201ENST00000218348 CROCC2H7BZ55 1655 aa14.58□□□□□ -0.08
USP11-201ENST00000218348 PLCH2O75038 1416 aa14.57□□□□□ -0.08
USP11-201ENST00000218348 MTUS2Q5JR59 1369 aa14.57□□□□□ -0.08
USP11-201ENST00000218348 MYOM3Q5VTT5 1437 aa14.56□□□□□ -0.08
USP11-201ENST00000218348 FRMPD1Q5SYB0 1578 aa14.56□□□□□ -0.08
USP11-201ENST00000218348 PTPN23Q9H3S7 1636 aa14.56□□□□□ -0.08
USP11-201ENST00000218348 ABCC1P33527 1531 aa14.55□□□□□ -0.08
USP11-201ENST00000218348 ARHGEF12Q9NZN5 1544 aa14.55□□□□□ -0.08
USP11-201ENST00000218348 CFAP74Q9C0B2 1584 aa14.54□□□□□ -0.08
USP11-201ENST00000218348 RAB3GAP2Q9H2M9 1393 aa14.54□□□□□ -0.08
USP11-201ENST00000218348 CHIC2Q9UKJ5 165 aa14.54□□□□□ -0.08
USP11-201ENST00000218348 RICTORQ6R327 1708 aa14.54□□□□□ -0.08
USP11-201ENST00000218348 MIA2Q96PC5 1412 aa14.54□□□□□ -0.08
USP11-201ENST00000218348 SIN3AQ96ST3 1273 aa14.54□□□□□ -0.08
USP11-201ENST00000218348 FGD6Q6ZV73 1430 aa14.53□□□□□ -0.08
USP11-201ENST00000218348 PLEKHD1A6NEE1 506 aa14.53□□□□□ -0.08
USP11-201ENST00000218348 MBD5Q9P267 1494 aa14.52□□□□□ -0.08
USP11-201ENST00000218348 ARHGEF5Q12774 1597 aa14.52□□□□□ -0.09
USP11-201ENST00000218348 SLC24A1O60721 1099 aa14.51□□□□□ -0.09
USP11-201ENST00000218348 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.51□□□□□ -0.09
USP11-201ENST00000218348 TSPOAP1O95153 1857 aa14.51□□□□□ -0.09
USP11-201ENST00000218348 DNMT1P26358 1616 aaKnown RBP14.5□□□□□ -0.09
USP11-201ENST00000218348 MIER1Q8N108 512 aa14.5□□□□□ -0.09
USP11-201ENST00000218348 CAMSAP2Q08AD1 1489 aa14.5□□□□□ -0.09
USP11-201ENST00000218348 KDM5CP41229 1560 aa14.5□□□□□ -0.09
USP11-201ENST00000218348 CDK11AQ9UQ88 783 aaPredicted RBP14.49□□□□□ -0.09
USP11-201ENST00000218348 NEO1Q92859 1461 aa14.49□□□□□ -0.09
USP11-201ENST00000218348 CD109Q6YHK3 1445 aa14.48□□□□□ -0.09
USP11-201ENST00000218348 MAST1Q9Y2H9 1570 aa14.47□□□□□ -0.09
USP11-201ENST00000218348 FANCAO15360 1455 aa14.47□□□□□ -0.09
USP11-201ENST00000218348 HIRIP3Q9BW71 556 aaPredicted RBP14.46□□□□□ -0.09
USP11-201ENST00000218348 RRP7BPQ9NSQ0 103 aa14.46□□□□□ -0.09
USP11-201ENST00000218348 INO80Q9ULG1 1556 aaPredicted RBP14.46□□□□□ -0.09
USP11-201ENST00000218348 KIAA1107Q9UPP5 1409 aa14.46□□□□□ -0.09
USP11-201ENST00000218348 SYCP2Q9BX26 1530 aa14.46□□□□□ -0.09
USP11-201ENST00000218348 NPM1P06748 294 aaKnown RBP eCLIP14.46□□□□□ -0.1
USP11-201ENST00000218348 ARHGAP5Q13017 1502 aa14.46□□□□□ -0.1
USP11-201ENST00000218348 GTF3C3Q9Y5Q9 886 aa14.45□□□□□ -0.1
USP11-201ENST00000218348 COL17A1Q9UMD9 1497 aaPredicted RBP14.45□□□□□ -0.1
USP11-201ENST00000218348 ZMYM4Q5VZL5 1548 aa14.45□□□□□ -0.1
USP11-201ENST00000218348 CENPBP07199 599 aaPredicted RBP14.44□□□□□ -0.1
USP11-201ENST00000218348 PTPRKQ15262 1439 aa14.44□□□□□ -0.1
USP11-201ENST00000218348 SETD5Q9C0A6 1442 aa14.43□□□□□ -0.1
USP11-201ENST00000218348 SIGLEC1Q9BZZ2 1709 aa14.42□□□□□ -0.1
USP11-201ENST00000218348 KIDINS220Q9ULH0 1771 aa14.42□□□□□ -0.1
USP11-201ENST00000218348 ADGBQ8N7X0 1667 aa14.42□□□□□ -0.1
USP11-201ENST00000218348 SHANK2Q9UPX8 1470 aa14.42□□□□□ -0.1
USP11-201ENST00000218348 AKNAQ7Z591 1439 aa14.41□□□□□ -0.1
USP11-201ENST00000218348 ZFYVE16Q7Z3T8 1539 aa14.41□□□□□ -0.1
USP11-201ENST00000218348 KCNH8Q96L42 1107 aa14.41□□□□□ -0.1
USP11-201ENST00000218348 ZNF644Q9H582 1327 aaPredicted RBP14.41□□□□□ -0.1
USP11-201ENST00000218348 PLXNC1O60486 1568 aa14.4□□□□□ -0.1
USP11-201ENST00000218348 TEX14Q8IWB6 1497 aa14.4□□□□□ -0.1
USP11-201ENST00000218348 ABCC5O15440 1437 aa14.4□□□□□ -0.1
USP11-201ENST00000218348 POGZQ7Z3K3 1410 aa14.4□□□□□ -0.1
USP11-201ENST00000218348 FAM69CQ0P6D2 419 aa14.4□□□□□ -0.11
USP11-201ENST00000218348 ADGRL2O95490 1459 aa14.39□□□□□ -0.11
USP11-201ENST00000218348 TRIM52Q96A61 297 aa14.39□□□□□ -0.11
USP11-201ENST00000218348 TRAPPC8Q9Y2L5 1435 aa14.39□□□□□ -0.11
USP11-201ENST00000218348 PLEKHH2Q8IVE3 1493 aa14.39□□□□□ -0.11
USP11-201ENST00000218348 BCORL1Q5H9F3 1711 aa14.38□□□□□ -0.11
USP11-201ENST00000218348 ZNF777Q9ULD5 760 aaPredicted RBP14.38□□□□□ -0.11
USP11-201ENST00000218348 DAPK1P53355 1430 aa14.38□□□□□ -0.11
USP11-201ENST00000218348 ADGRL1O94910 1474 aa14.38□□□□□ -0.11
USP11-201ENST00000218348 GCC2Q8IWJ2 1684 aa14.38□□□□□ -0.11
USP11-201ENST00000218348 ABCA6Q8N139 1617 aa14.37□□□□□ -0.11
USP11-201ENST00000218348 HECW2Q9P2P5 1572 aa14.35□□□□□ -0.11
USP11-201ENST00000218348 CCDC141Q6ZP82 1450 aa14.35□□□□□ -0.11
USP11-201ENST00000218348 ACIN1Q9UKV3 1341 aaKnown RBP14.34□□□□□ -0.11
USP11-201ENST00000218348 MLH3Q9UHC1 1453 aa14.34□□□□□ -0.11
USP11-201ENST00000218348 REREQ9P2R6 1566 aa14.34□□□□□ -0.11
USP11-201ENST00000218348 DIP2CQ9Y2E4 1556 aa14.33□□□□□ -0.12
USP11-201ENST00000218348 CLSPNQ9HAW4 1339 aa14.33□□□□□ -0.12
USP11-201ENST00000218348 FOXD1Q16676 465 aa14.33□□□□□ -0.12
USP11-201ENST00000218348 ZNF518AQ6AHZ1 1483 aa14.33□□□□□ -0.12
USP11-201ENST00000218348 KDM6BO15054 1643 aa14.32□□□□□ -0.12
USP11-201ENST00000218348 CFDP1Q9UEE9 299 aaPredicted RBP14.32□□□□□ -0.12
USP11-201ENST00000218348 ATP7AQ04656 1500 aa14.31□□□□□ -0.12
USP11-201ENST00000218348 RTEL1-TNFRSF6BF6WH68 1400 aa14.31□□□□□ -0.12
USP11-201ENST00000218348 SCAPERQ9BY12 1400 aa14.31□□□□□ -0.12
USP11-201ENST00000218348 ARHGEF40Q8TER5 1519 aa14.31□□□□□ -0.12
USP11-201ENST00000218348 DEPDC5O75140 1603 aa14.3□□□□□ -0.12
USP11-201ENST00000218348 EFCAB2Q5VUJ9 269 aa14.3□□□□□ -0.12
USP11-201ENST00000218348 DENND4BO75064 1496 aaPredicted RBP14.29□□□□□ -0.12
USP11-201ENST00000218348 ROCK1Q13464 1354 aa14.29□□□□□ -0.12
USP11-201ENST00000218348 MROH1Q8NDA8 1641 aa14.29□□□□□ -0.12
USP11-201ENST00000218348 EIF2AK4Q9P2K8 1649 aaKnown RBP14.27□□□□□ -0.12
USP11-201ENST00000218348 MAGI2Q86UL8 1455 aa14.27□□□□□ -0.13
USP11-201ENST00000218348 NCOA1Q15788 1441 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms