RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 CDC42BPBQ9Y5S2 1711 aa45.11■■■■■ 4.81
PDCD2-201ENST00000167218 ARHGAP5Q13017 1502 aa45.09■■■■■ 4.81
PDCD2-201ENST00000167218 POGZQ7Z3K3 1410 aa45.08■■■■■ 4.81
PDCD2-201ENST00000167218 ARHGEF40Q8TER5 1519 aa45.06■■■■■ 4.8
PDCD2-201ENST00000167218 PREX2Q70Z35 1606 aa45.04■■■■■ 4.8
PDCD2-201ENST00000167218 MAGI2Q86UL8 1455 aa44.99■■■■■ 4.79
PDCD2-201ENST00000167218 CDC42BPAQ5VT25 1732 aa44.99■■■■■ 4.79
PDCD2-201ENST00000167218 YEATS2Q9ULM3 1422 aa44.98■■■■■ 4.79
PDCD2-201ENST00000167218 ZFYVE16Q7Z3T8 1539 aa44.96■■■■■ 4.79
PDCD2-201ENST00000167218 ADAMTSL3P82987 1691 aa44.91■■■■■ 4.78
PDCD2-201ENST00000167218 MTUS2Q5JR59 1369 aa44.89■■■■■ 4.78
PDCD2-201ENST00000167218 GPATCH8Q9UKJ3 1502 aaKnown RBP44.89■■■■■ 4.78
PDCD2-201ENST00000167218 ZNF518AQ6AHZ1 1483 aa44.88■■■■■ 4.78
PDCD2-201ENST00000167218 BCORL1Q5H9F3 1711 aa44.87■■■■■ 4.77
PDCD2-201ENST00000167218 AFAP1Q8N556 730 aa44.86■■■■■ 4.77
PDCD2-201ENST00000167218 KDM5CP41229 1560 aa44.86■■■■■ 4.77
PDCD2-201ENST00000167218 ABCC1P33527 1531 aa44.85■■■■■ 4.77
PDCD2-201ENST00000167218 ARHGEF12Q9NZN5 1544 aa44.85■■■■■ 4.77
PDCD2-201ENST00000167218 SIGLEC1Q9BZZ2 1709 aa44.84■■■■■ 4.77
PDCD2-201ENST00000167218 ARID4BQ4LE39 1312 aaPredicted RBP44.84■■■■■ 4.77
PDCD2-201ENST00000167218 VPS8Q8N3P4 1428 aa44.8■■■■■ 4.76
PDCD2-201ENST00000167218 EHBP1L1Q8N3D4 1523 aa44.79■■■■■ 4.76
PDCD2-201ENST00000167218 ITSN2Q9NZM3 1697 aa44.78■■■■■ 4.76
PDCD2-201ENST00000167218 TRAPPC8Q9Y2L5 1435 aa44.77■■■■■ 4.76
PDCD2-201ENST00000167218 ATP10AO60312 1499 aa44.75■■■■■ 4.75
PDCD2-201ENST00000167218 SAMD9LQ8IVG5 1584 aa44.74■■■■■ 4.75
PDCD2-201ENST00000167218 CCNB3Q8WWL7 1395 aa44.73■■■■■ 4.75
PDCD2-201ENST00000167218 MADDQ8WXG6 1647 aa44.71■■■■■ 4.75
PDCD2-201ENST00000167218 HECW2Q9P2P5 1572 aa44.7■■■■■ 4.75
PDCD2-201ENST00000167218 ZNF777Q9ULD5 760 aaPredicted RBP44.7■■■■■ 4.75
PDCD2-201ENST00000167218 MLH3Q9UHC1 1453 aa44.7■■■■■ 4.75
PDCD2-201ENST00000167218 PTPRMP28827 1452 aa44.69■■■■■ 4.74
PDCD2-201ENST00000167218 TIAM1Q13009 1591 aa44.68■■■■■ 4.74
PDCD2-201ENST00000167218 C9orf84Q5VXU9 1444 aa44.67■■■■■ 4.74
PDCD2-201ENST00000167218 CFDP1Q9UEE9 299 aaPredicted RBP44.67■■■■■ 4.74
PDCD2-201ENST00000167218 DIP2CQ9Y2E4 1556 aa44.62■■■■■ 4.73
PDCD2-201ENST00000167218 SYCP2Q9BX26 1530 aa44.62■■■■■ 4.73
PDCD2-201ENST00000167218 KIAA1107Q9UPP5 1409 aa44.59■■■■■ 4.73
PDCD2-201ENST00000167218 ABCA6Q8N139 1617 aa44.58■■■■■ 4.73
PDCD2-201ENST00000167218 HNRNPMP52272 730 aaKnown RBP eCLIP44.57■■■■■ 4.73
PDCD2-201ENST00000167218 MYT1LQ9UL68 1186 aa44.57■■■■■ 4.73
PDCD2-201ENST00000167218 KIDINS220Q9ULH0 1771 aa44.56■■■■■ 4.72
PDCD2-201ENST00000167218 PLEKHH2Q8IVE3 1493 aa44.56■■■■■ 4.72
PDCD2-201ENST00000167218 RIMS1Q86UR5 1692 aaKnown RBP44.55■■■■■ 4.72
PDCD2-201ENST00000167218 SUPT6HQ7KZ85 1726 aaKnown RBP44.55■■■■■ 4.72
PDCD2-201ENST00000167218 NCOA2Q15596 1464 aa44.54■■■■■ 4.72
PDCD2-201ENST00000167218 REREQ9P2R6 1566 aa44.54■■■■■ 4.72
PDCD2-201ENST00000167218 MLECQ14165 292 aa44.52■■■■■ 4.72
PDCD2-201ENST00000167218 MAP3K1Q13233 1512 aa44.51■■■■■ 4.72
PDCD2-201ENST00000167218 LRRC9Q6ZRR7 1453 aa44.51■■■■■ 4.72
PDCD2-201ENST00000167218 ZNF644Q9H582 1327 aaPredicted RBP44.5■■■■■ 4.71
PDCD2-201ENST00000167218 FER1L4A9Z1Z3 1794 aa44.43■■■■■ 4.7
PDCD2-201ENST00000167218 SPAG9O60271 1321 aaKnown RBP44.43■■■■■ 4.7
PDCD2-201ENST00000167218 KANK4Q5T7N3 995 aaPredicted RBP44.42■■■■■ 4.7
PDCD2-201ENST00000167218 MBD5Q9P267 1494 aa44.4■■■■■ 4.7
PDCD2-201ENST00000167218 AGLP35573 1532 aa44.4■■■■■ 4.7
PDCD2-201ENST00000167218 INO80Q9ULG1 1556 aaPredicted RBP44.36■■■■■ 4.69
PDCD2-201ENST00000167218 ATP7AQ04656 1500 aa44.35■■■■■ 4.69
PDCD2-201ENST00000167218 CAMSAP2Q08AD1 1489 aa44.28■■■■■ 4.68
PDCD2-201ENST00000167218 PLPPR3Q6T4P5 718 aa44.22■■■■■ 4.67
PDCD2-201ENST00000167218 PLXNC1O60486 1568 aa44.19■■■■■ 4.66
PDCD2-201ENST00000167218 LMTK3Q96Q04 1460 aa44.19■■■■■ 4.66
PDCD2-201ENST00000167218 RTEL1-TNFRSF6BF6WH68 1400 aa44.18■■■■■ 4.66
PDCD2-201ENST00000167218 A2MP01023 1474 aa44.17■■■■■ 4.66
PDCD2-201ENST00000167218 CCDC141Q6ZP82 1450 aa44.17■■■■■ 4.66
PDCD2-201ENST00000167218 RSPH4AQ5TD94 716 aa44.15■■■■■ 4.66
PDCD2-201ENST00000167218 APLP2Q06481 763 aa44.14■■■■■ 4.66
PDCD2-201ENST00000167218 CEBPAP49715 358 aaPredicted RBP44.13■■■■■ 4.66
PDCD2-201ENST00000167218 MYOM3Q5VTT5 1437 aa44.12■■■■■ 4.65
PDCD2-201ENST00000167218 ARHGEF5Q12774 1597 aa44.12■■■■■ 4.65
PDCD2-201ENST00000167218 ADGBQ8N7X0 1667 aa44.12■■■■■ 4.65
PDCD2-201ENST00000167218 MIA2Q96PC5 1412 aa44.09■■■■■ 4.65
PDCD2-201ENST00000167218 C3P01024 1663 aa44.03■■■■■ 4.64
PDCD2-201ENST00000167218 CNTLNQ9NXG0 1405 aa44■■■■■ 4.63
PDCD2-201ENST00000167218 ESF1Q9H501 851 aaKnown RBP44■■■■■ 4.63
PDCD2-201ENST00000167218 DHX29Q7Z478 1369 aaKnown RBP43.99■■■■■ 4.63
PDCD2-201ENST00000167218 SETD1BQ9UPS6 1966 aaKnown RBP43.99■■■■■ 4.63
PDCD2-201ENST00000167218 TSPY4P0CV99 314 aa43.94■■■■■ 4.62
PDCD2-201ENST00000167218 TSPY10P0CW01 314 aa43.94■■■■■ 4.62
PDCD2-201ENST00000167218 PREX1Q8TCU6 1659 aa43.94■■■■■ 4.62
PDCD2-201ENST00000167218 HSPA2P54652 639 aa43.93■■■■■ 4.62
PDCD2-201ENST00000167218 MROH2AA6NES4 1674 aa43.91■■■■■ 4.62
PDCD2-201ENST00000167218 MAST1Q9Y2H9 1570 aa43.9■■■■■ 4.62
PDCD2-201ENST00000167218 GGT6Q6P531 493 aa43.9■■■■■ 4.62
PDCD2-201ENST00000167218 ZMYM3Q14202 1370 aa43.86■■■■■ 4.61
PDCD2-201ENST00000167218 CLTCQ00610 1675 aaKnown RBP43.85■■■■■ 4.61
PDCD2-201ENST00000167218 PTPN23Q9H3S7 1636 aa43.84■■■■■ 4.61
PDCD2-201ENST00000167218 PPP6R1Q9UPN7 881 aa43.84■■■■■ 4.61
PDCD2-201ENST00000167218 FGD6Q6ZV73 1430 aa43.82■■■■■ 4.6
PDCD2-201ENST00000167218 KIF3BO15066 747 aa43.79■■■■■ 4.6
PDCD2-201ENST00000167218 UHRF1BP1Q6BDS2 1440 aa43.79■■■■■ 4.6
PDCD2-201ENST00000167218 TCOF1Q13428 1488 aaKnown RBP43.77■■■■■ 4.6
PDCD2-201ENST00000167218 ABCC5O15440 1437 aa43.74■■■■■ 4.59
PDCD2-201ENST00000167218 NPATQ14207 1427 aa43.73■■■■■ 4.59
PDCD2-201ENST00000167218 CROCC2H7BZ55 1655 aa43.69■■■■■ 4.58
PDCD2-201ENST00000167218 SHANK2Q9UPX8 1470 aa43.68■■■■■ 4.58
PDCD2-201ENST00000167218 PTPRKQ15262 1439 aa43.66■■■■■ 4.58
PDCD2-201ENST00000167218 DNMT1P26358 1616 aaKnown RBP43.66■■■■■ 4.58
PDCD2-201ENST00000167218 DAPK1P53355 1430 aa43.65■■■■■ 4.58
PDCD2-201ENST00000167218 FAM135AQ9P2D6 1515 aa43.63■■■■■ 4.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms