RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 NPM2Q86SE8 214 aaKnown RBP7.98□□□□□ -1.13
CEACAM1-201ENST00000161559 IL27Q8NEV9 243 aa7.98□□□□□ -1.13
CEACAM1-201ENST00000161559 ZBED9Q6R2W3 1325 aa7.97□□□□□ -1.13
CEACAM1-201ENST00000161559 PRDM2Q13029 1718 aa7.97□□□□□ -1.13
CEACAM1-201ENST00000161559 FMN1Q68DA7 1419 aa7.97□□□□□ -1.13
CEACAM1-201ENST00000161559 CHMP7Q8WUX9 453 aaPredicted RBP7.97□□□□□ -1.13
CEACAM1-201ENST00000161559 ZNF644Q9H582 1327 aaPredicted RBP7.97□□□□□ -1.13
CEACAM1-201ENST00000161559 POLA1P09884 1462 aaPredicted RBP7.97□□□□□ -1.13
CEACAM1-201ENST00000161559 NCOA1Q15788 1441 aa7.96□□□□□ -1.13
CEACAM1-201ENST00000161559 CTTNBP2Q8WZ74 1663 aa7.96□□□□□ -1.14
CEACAM1-201ENST00000161559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.96□□□□□ -1.14
CEACAM1-201ENST00000161559 CCDC136Q96JN2 1154 aa7.95□□□□□ -1.14
CEACAM1-201ENST00000161559 LAS1LQ9Y4W2 734 aaKnown RBP7.94□□□□□ -1.14
CEACAM1-201ENST00000161559 PRKCSHP14314 528 aaPredicted RBP7.94□□□□□ -1.14
CEACAM1-201ENST00000161559 CDK13Q14004 1512 aaKnown RBP7.94□□□□□ -1.14
CEACAM1-201ENST00000161559 GRIN2BQ13224 1484 aa7.93□□□□□ -1.14
CEACAM1-201ENST00000161559 EFCAB5A4FU69 1503 aa7.93□□□□□ -1.14
CEACAM1-201ENST00000161559 BCORL1Q5H9F3 1711 aa7.92□□□□□ -1.14
CEACAM1-201ENST00000161559 SUPT6HQ7KZ85 1726 aaKnown RBP7.92□□□□□ -1.14
CEACAM1-201ENST00000161559 TOPBP1Q92547 1522 aa7.92□□□□□ -1.14
CEACAM1-201ENST00000161559 HECW1Q76N89 1606 aa7.92□□□□□ -1.14
CEACAM1-201ENST00000161559 UGGT2Q9NYU1 1516 aa7.92□□□□□ -1.14
CEACAM1-201ENST00000161559 DHX29Q7Z478 1369 aaKnown RBP7.91□□□□□ -1.14
CEACAM1-201ENST00000161559 ABCA10Q8WWZ4 1543 aa7.91□□□□□ -1.14
CEACAM1-201ENST00000161559 SPATA31E1Q6ZUB1 1445 aa7.91□□□□□ -1.14
CEACAM1-201ENST00000161559 TEX14Q8IWB6 1497 aa7.91□□□□□ -1.14
CEACAM1-201ENST00000161559 IPO9Q96P70 1041 aaKnown RBP7.91□□□□□ -1.14
CEACAM1-201ENST00000161559 EXOC6Q8TAG9 804 aa7.9□□□□□ -1.14
CEACAM1-201ENST00000161559 SLC4A1APQ9BWU0 796 aaKnown RBP7.9□□□□□ -1.14
CEACAM1-201ENST00000161559 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.9□□□□□ -1.14
CEACAM1-201ENST00000161559 GCC2Q8IWJ2 1684 aa7.9□□□□□ -1.14
CEACAM1-201ENST00000161559 NUDCQ9Y266 331 aa7.9□□□□□ -1.14
CEACAM1-201ENST00000161559 ANKRD30BQ9BXX2 1392 aa7.9□□□□□ -1.15
CEACAM1-201ENST00000161559 SAMD9Q5K651 1589 aa7.89□□□□□ -1.15
CEACAM1-201ENST00000161559 PLIN1O60240 522 aa7.89□□□□□ -1.15
CEACAM1-201ENST00000161559 ERICH6BQ5W0A0 696 aa7.89□□□□□ -1.15
CEACAM1-201ENST00000161559 LAMC3Q9Y6N6 1575 aa7.89□□□□□ -1.15
CEACAM1-201ENST00000161559 SMG6Q86US8 1419 aaKnown RBP7.89□□□□□ -1.15
CEACAM1-201ENST00000161559 THOC2Q8NI27 1593 aaKnown RBP7.89□□□□□ -1.15
CEACAM1-201ENST00000161559 ZBTB47Q9UFB7 747 aaPredicted RBP7.89□□□□□ -1.15
CEACAM1-201ENST00000161559 ANP32AP39687 249 aaKnown RBP7.88□□□□□ -1.15
CEACAM1-201ENST00000161559 DNMBPQ6XZF7 1577 aa7.88□□□□□ -1.15
CEACAM1-201ENST00000161559 ARHGEF11O15085 1522 aa7.88□□□□□ -1.15
CEACAM1-201ENST00000161559 EHBP1L1Q8N3D4 1523 aa7.88□□□□□ -1.15
CEACAM1-201ENST00000161559 RPRD2Q5VT52 1461 aaKnown RBP7.88□□□□□ -1.15
CEACAM1-201ENST00000161559 SLC4A3P48751 1232 aa7.87□□□□□ -1.15
CEACAM1-201ENST00000161559 PNISRQ8TF01 805 aaKnown RBP7.87□□□□□ -1.15
CEACAM1-201ENST00000161559 CDCA7LQ96GN5 454 aa7.87□□□□□ -1.15
CEACAM1-201ENST00000161559 URB2Q14146 1524 aaKnown RBP7.87□□□□□ -1.15
CEACAM1-201ENST00000161559 CUL7Q14999 1698 aa7.87□□□□□ -1.15
CEACAM1-201ENST00000161559 KDM2AQ9Y2K7 1162 aa7.86□□□□□ -1.15
CEACAM1-201ENST00000161559 MRC2Q9UBG0 1479 aa7.86□□□□□ -1.15
CEACAM1-201ENST00000161559 RNF123Q5XPI4 1314 aa7.86□□□□□ -1.15
CEACAM1-201ENST00000161559 USP47Q96K76 1375 aa7.86□□□□□ -1.15
CEACAM1-201ENST00000161559 TMC1Q8TDI8 760 aa7.85□□□□□ -1.15
CEACAM1-201ENST00000161559 RTL5Q5HYW3 569 aaPredicted RBP7.85□□□□□ -1.15
CEACAM1-201ENST00000161559 ZNF777Q9ULD5 760 aaPredicted RBP7.85□□□□□ -1.15
CEACAM1-201ENST00000161559 TCOF1Q13428 1488 aaKnown RBP7.85□□□□□ -1.15
CEACAM1-201ENST00000161559 EPRSP07814 1512 aaKnown RBP7.85□□□□□ -1.15
CEACAM1-201ENST00000161559 NEFMP07197 916 aa7.85□□□□□ -1.15
CEACAM1-201ENST00000161559 GAPVD1Q14C86 1478 aa7.84□□□□□ -1.15
CEACAM1-201ENST00000161559 ABCC5O15440 1437 aa7.84□□□□□ -1.15
CEACAM1-201ENST00000161559 DAPK1P53355 1430 aa7.84□□□□□ -1.15
CEACAM1-201ENST00000161559 POLR1AO95602 1720 aaPredicted RBP7.84□□□□□ -1.16
CEACAM1-201ENST00000161559 PDE4AP27815 886 aa7.83□□□□□ -1.16
CEACAM1-201ENST00000161559 BRPF3Q9ULD4 1205 aa7.83□□□□□ -1.16
CEACAM1-201ENST00000161559 ST20-MTHFSA0A0A6YYL1 179 aa7.83□□□□□ -1.16
CEACAM1-201ENST00000161559 RRP1P56182 461 aaKnown RBP7.83□□□□□ -1.16
CEACAM1-201ENST00000161559 DNAJC5Q9H3Z4 198 aa7.83□□□□□ -1.16
CEACAM1-201ENST00000161559 ABCA5Q8WWZ7 1642 aa7.83□□□□□ -1.16
CEACAM1-201ENST00000161559 C20orf194Q5TEA3 1177 aa7.82□□□□□ -1.16
CEACAM1-201ENST00000161559 PZPP20742 1482 aa7.82□□□□□ -1.16
CEACAM1-201ENST00000161559 PKD2Q13563 968 aa7.82□□□□□ -1.16
CEACAM1-201ENST00000161559 OSCARQ8IYS5 282 aa7.81□□□□□ -1.16
CEACAM1-201ENST00000161559 CARD11Q9BXL7 1154 aa7.8□□□□□ -1.16
CEACAM1-201ENST00000161559 RCAN3Q9UKA8 241 aa7.8□□□□□ -1.16
CEACAM1-201ENST00000161559 KDM5CP41229 1560 aa7.8□□□□□ -1.16
CEACAM1-201ENST00000161559 NPM1P06748 294 aaKnown RBP eCLIP7.8□□□□□ -1.16
CEACAM1-201ENST00000161559 BACH2Q9BYV9 841 aa7.79□□□□□ -1.16
CEACAM1-201ENST00000161559 MYT1LQ9UL68 1186 aa7.79□□□□□ -1.16
CEACAM1-201ENST00000161559 CC2D1BQ5T0F9 858 aaKnown RBP7.79□□□□□ -1.16
CEACAM1-201ENST00000161559 MBD5Q9P267 1494 aa7.79□□□□□ -1.16
CEACAM1-201ENST00000161559 CRBNQ96SW2 442 aa7.78□□□□□ -1.16
CEACAM1-201ENST00000161559 PRG4Q92954 1404 aaPredicted RBP7.78□□□□□ -1.16
CEACAM1-201ENST00000161559 WDR62O43379 1518 aa7.78□□□□□ -1.16
CEACAM1-201ENST00000161559 DCAF11Q8TEB1 546 aa7.78□□□□□ -1.16
CEACAM1-201ENST00000161559 DNMT1P26358 1616 aaKnown RBP7.77□□□□□ -1.17
CEACAM1-201ENST00000161559 LRPPRCP42704 1394 aaKnown RBP7.77□□□□□ -1.17
CEACAM1-201ENST00000161559 MIA2Q96PC5 1412 aa7.77□□□□□ -1.17
CEACAM1-201ENST00000161559 NBPF1Q3BBV0 1214 aa7.77□□□□□ -1.17
CEACAM1-201ENST00000161559 IFT140Q96RY7 1462 aa7.76□□□□□ -1.17
CEACAM1-201ENST00000161559 RGL3Q3MIN7 710 aa7.76□□□□□ -1.17
CEACAM1-201ENST00000161559 IQGAP2Q13576 1575 aa7.75□□□□□ -1.17
CEACAM1-201ENST00000161559 CFDP1Q9UEE9 299 aaPredicted RBP7.75□□□□□ -1.17
CEACAM1-201ENST00000161559 KIF14Q15058 1648 aa7.75□□□□□ -1.17
CEACAM1-201ENST00000161559 NUP153P49790 1475 aaKnown RBP7.75□□□□□ -1.17
CEACAM1-201ENST00000161559 KIF21AQ7Z4S6 1674 aa7.75□□□□□ -1.17
CEACAM1-201ENST00000161559 MYBBP1AQ9BQG0 1328 aaKnown RBP7.75□□□□□ -1.17
CEACAM1-201ENST00000161559 KIAA0586Q9BVV6 1533 aa7.75□□□□□ -1.17
CEACAM1-201ENST00000161559 KIAA1107Q9UPP5 1409 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms