RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 CDK11BP21127 795 aaKnown RBP29.86■■■□□ 2.37
TARBP1-201ENST00000040877 CCDC18Q5T9S5 1454 aa29.86■■■□□ 2.37
TARBP1-201ENST00000040877 SENP3-EIF4A1A0A087X0R7 540 aa29.85■■■□□ 2.37
TARBP1-201ENST00000040877 KTN1Q86UP2 1357 aaKnown RBP29.85■■■□□ 2.37
TARBP1-201ENST00000040877 RAB3GAP2Q9H2M9 1393 aa29.85■■■□□ 2.37
TARBP1-201ENST00000040877 EIF3AQ14152 1382 aaKnown RBP29.8■■■□□ 2.36
TARBP1-201ENST00000040877 ROCK2O75116 1388 aaKnown RBP29.79■■■□□ 2.36
TARBP1-201ENST00000040877 ZRSR1Q15695 479 aaKnown RBP29.77■■■□□ 2.36
TARBP1-201ENST00000040877 OS9Q13438 667 aaPredicted RBP29.76■■■□□ 2.35
TARBP1-201ENST00000040877 RALBP1Q15311 655 aa29.75■■■□□ 2.35
TARBP1-201ENST00000040877 SMARCA4P51532 1647 aa29.75■■■□□ 2.35
TARBP1-201ENST00000040877 FHOD3Q2V2M9 1422 aa29.74■■■□□ 2.35
TARBP1-201ENST00000040877 SAFB2Q14151 953 aaKnown RBP eCLIP29.73■■■□□ 2.35
TARBP1-201ENST00000040877 RGS3P49796 1198 aa29.73■■■□□ 2.35
TARBP1-201ENST00000040877 JPH4Q96JJ6 628 aa29.73■■■□□ 2.35
TARBP1-201ENST00000040877 TRIM44Q96DX7 344 aaPredicted RBP29.72■■■□□ 2.35
TARBP1-201ENST00000040877 SPAG9O60271 1321 aaKnown RBP29.72■■■□□ 2.35
TARBP1-201ENST00000040877 CALD1Q05682 793 aaKnown RBP29.72■■■□□ 2.35
TARBP1-201ENST00000040877 STK26Q9P289 416 aa29.71■■■□□ 2.35
TARBP1-201ENST00000040877 KIF3BO15066 747 aa29.71■■■□□ 2.35
TARBP1-201ENST00000040877 RTF1Q92541 710 aaKnown RBP29.71■■■□□ 2.35
TARBP1-201ENST00000040877 CFAP44Q96MT7 982 aa29.7■■■□□ 2.34
TARBP1-201ENST00000040877 NPHP1O15259 732 aa29.7■■■□□ 2.34
TARBP1-201ENST00000040877 FOXD1Q16676 465 aa29.7■■■□□ 2.34
TARBP1-201ENST00000040877 CHMP4AQ9BY43 222 aa29.65■■■□□ 2.34
TARBP1-201ENST00000040877 IPO8O15397 1037 aaKnown RBP29.65■■■□□ 2.34
TARBP1-201ENST00000040877 FANCD2Q9BXW9 1451 aa29.64■■■□□ 2.34
TARBP1-201ENST00000040877 HNRNPMP52272 730 aaKnown RBP eCLIP29.63■■■□□ 2.338e-7■■■■■ 58.1
TARBP1-201ENST00000040877 SOX12O15370 315 aa29.62■■■□□ 2.33
TARBP1-201ENST00000040877 ERICH6BQ5W0A0 696 aa29.59■■■□□ 2.33
TARBP1-201ENST00000040877 TERF2IPQ9NYB0 399 aa29.58■■■□□ 2.33
TARBP1-201ENST00000040877 KCNJ4P48050 445 aa29.58■■■□□ 2.33
TARBP1-201ENST00000040877 FGD1P98174 961 aa29.57■■■□□ 2.32
TARBP1-201ENST00000040877 WASHC2CQ9Y4E1 1318 aa29.57■■■□□ 2.32
TARBP1-201ENST00000040877 GOLGA2Q08379 1002 aa29.56■■■□□ 2.32
TARBP1-201ENST00000040877 EID1Q9Y6B2 187 aa29.56■■■□□ 2.32
TARBP1-201ENST00000040877 U2AF1L5P0DN76 240 aaPredicted RBP29.55■■■□□ 2.32
TARBP1-201ENST00000040877 U2AF1Q01081 240 aaKnown RBP eCLIP29.55■■■□□ 2.32
TARBP1-201ENST00000040877 HSP90AB1P08238 724 aaKnown RBP29.53■■■□□ 2.32
TARBP1-201ENST00000040877 L3MBTL2Q969R5 705 aa29.53■■■□□ 2.32
TARBP1-201ENST00000040877 B4GALNT3Q6L9W6 998 aa29.52■■■□□ 2.32
TARBP1-201ENST00000040877 MCCP23508 829 aa29.51■■■□□ 2.31
TARBP1-201ENST00000040877 PTMAP06454 111 aaKnown RBP29.51■■■□□ 2.31
TARBP1-201ENST00000040877 PTPRGP23470 1445 aa29.49■■■□□ 2.31
TARBP1-201ENST00000040877 PAK3O75914 559 aaPredicted RBP29.47■■■□□ 2.31
TARBP1-201ENST00000040877 UACAQ9BZF9 1416 aa29.46■■■□□ 2.31
TARBP1-201ENST00000040877 HSCBQ8IWL3 235 aa29.45■■■□□ 2.3
TARBP1-201ENST00000040877 RTN4Q9NQC3 1192 aaKnown RBP29.45■■■□□ 2.3
TARBP1-201ENST00000040877 RCAN3Q9UKA8 241 aa29.43■■■□□ 2.3
TARBP1-201ENST00000040877 NOP58Q9Y2X3 529 aaKnown RBP29.43■■■□□ 2.3
TARBP1-201ENST00000040877 NLRP13Q86W25 1043 aa29.42■■■□□ 2.3
TARBP1-201ENST00000040877 CCDC144AA2RUR9 1427 aa29.41■■■□□ 2.3
TARBP1-201ENST00000040877 PHLDB1Q86UU1 1377 aa29.41■■■□□ 2.3
TARBP1-201ENST00000040877 CSB-PGBD3P0DP91 1061 aa29.41■■■□□ 2.3
TARBP1-201ENST00000040877 HDAC5Q9UQL6 1122 aa29.4■■■□□ 2.3
TARBP1-201ENST00000040877 RWDD1Q9H446 243 aaPredicted RBP29.39■■■□□ 2.3
TARBP1-201ENST00000040877 PDE3BQ13370 1112 aa29.36■■■□□ 2.29
TARBP1-201ENST00000040877 LMOD3Q0VAK6 560 aa29.36■■■□□ 2.29
TARBP1-201ENST00000040877 STK31Q9BXU1 1019 aa29.35■■■□□ 2.29
TARBP1-201ENST00000040877 GAPVD1Q14C86 1478 aa29.33■■■□□ 2.29
TARBP1-201ENST00000040877 GOLGA6L6A8MZA4 724 aa29.33■■■□□ 2.29
TARBP1-201ENST00000040877 NAP1L2Q9ULW6 460 aaPredicted RBP29.32■■■□□ 2.28
TARBP1-201ENST00000040877 NGDNQ8NEJ9 315 aaKnown RBP29.31■■■□□ 2.28
TARBP1-201ENST00000040877 GOLGA6L4A6NEF3 574 aa29.31■■■□□ 2.28
TARBP1-201ENST00000040877 VGFO15240 615 aaPredicted RBP29.3■■■□□ 2.28
TARBP1-201ENST00000040877 KIF15Q9NS87 1388 aa29.29■■■□□ 2.28
TARBP1-201ENST00000040877 FGD5Q6ZNL6 1462 aa29.29■■■□□ 2.28
TARBP1-201ENST00000040877 NRDCO43847 1150 aa29.29■■■□□ 2.28
TARBP1-201ENST00000040877 ITPRIPQ8IWB1 547 aa29.28■■■□□ 2.28
TARBP1-201ENST00000040877 KIAA1211Q6ZU35 1233 aa29.28■■■□□ 2.28
TARBP1-201ENST00000040877 PMFBP1Q8TBY8 1022 aa29.28■■■□□ 2.28
TARBP1-201ENST00000040877 OSCARQ8IYS5 282 aa29.26■■■□□ 2.27
TARBP1-201ENST00000040877 DEKP35659 375 aaKnown RBP29.25■■■□□ 2.27
TARBP1-201ENST00000040877 TPRNQ4KMQ1 711 aa29.25■■■□□ 2.27
TARBP1-201ENST00000040877 RUSC2Q8N2Y8 1516 aa29.25■■■□□ 2.27
TARBP1-201ENST00000040877 IGF1RP08069 1367 aa29.25■■■□□ 2.27
TARBP1-201ENST00000040877 DNTTIP2Q5QJE6 756 aaKnown RBP29.24■■■□□ 2.27
TARBP1-201ENST00000040877 RBM19Q9Y4C8 960 aaKnown RBP29.24■■■□□ 2.27
TARBP1-201ENST00000040877 DHX57Q6P158 1386 aaKnown RBP29.23■■■□□ 2.27
TARBP1-201ENST00000040877 TCERG1O14776 1098 aaKnown RBP29.22■■■□□ 2.27
TARBP1-201ENST00000040877 HMMRO75330 724 aa29.22■■■□□ 2.27
TARBP1-201ENST00000040877 NCAPD3P42695 1498 aa29.22■■■□□ 2.27
TARBP1-201ENST00000040877 MYOM3Q5VTT5 1437 aa29.21■■■□□ 2.27
TARBP1-201ENST00000040877 SMC4Q9NTJ3 1288 aa29.21■■■□□ 2.27
TARBP1-201ENST00000040877 TRAK1Q9UPV9 953 aa29.21■■■□□ 2.27
TARBP1-201ENST00000040877 AMPHP49418 695 aa29.21■■■□□ 2.27
TARBP1-201ENST00000040877 NAP1L5Q96NT1 182 aaPredicted RBP29.2■■■□□ 2.26
TARBP1-201ENST00000040877 MYBBP1AQ9BQG0 1328 aaKnown RBP29.19■■■□□ 2.26
TARBP1-201ENST00000040877 ST20-MTHFSA0A0A6YYL1 179 aa29.17■■■□□ 2.26
TARBP1-201ENST00000040877 PLCB2Q00722 1185 aa29.17■■■□□ 2.26
TARBP1-201ENST00000040877 NUTM2DQ5VT03 806 aaPredicted RBP29.17■■■□□ 2.26
TARBP1-201ENST00000040877 EVC2Q86UK5 1308 aa29.16■■■□□ 2.26
TARBP1-201ENST00000040877 STAC3Q96MF2 364 aa29.15■■■□□ 2.26
TARBP1-201ENST00000040877 CENPJQ9HC77 1338 aaPredicted RBP29.15■■■□□ 2.26
TARBP1-201ENST00000040877 PTMSP20962 102 aa29.14■■■□□ 2.26
TARBP1-201ENST00000040877 TAOK2Q9UL54 1235 aa29.14■■■□□ 2.26
TARBP1-201ENST00000040877 APBB1O00213 710 aa29.14■■■□□ 2.26
TARBP1-201ENST00000040877 GPATCH3Q96I76 525 aa29.13■■■□□ 2.25
TARBP1-201ENST00000040877 CUX1P39880 1505 aa29.13■■■□□ 2.25
TARBP1-201ENST00000040877 CGNL1Q0VF96 1302 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms