RNA–Protein interactions for RNA: ENST00000000442.10

ESRRA-201, Transcript of estrogen related receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ESRRA, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-201ENST00000000442 NUP153P49790 1475 aaKnown RBP37.17■■■■□ 3.54
ESRRA-201ENST00000000442 NUP160Q12769 1436 aa37.16■■■■□ 3.54
ESRRA-201ENST00000000442 FBLN2P98095 1184 aa37.14■■■■□ 3.54
ESRRA-201ENST00000000442 FKBP8Q14318 412 aa37.13■■■■□ 3.53
ESRRA-201ENST00000000442 HSPA5P11021 654 aaKnown RBP37.12■■■■□ 3.53
ESRRA-201ENST00000000442 ABCC5O15440 1437 aa37.11■■■■□ 3.53
ESRRA-201ENST00000000442 TSHZ2Q9NRE2 1034 aa37.09■■■■□ 3.53
ESRRA-201ENST00000000442 WASHC2AQ641Q2 1341 aa37.08■■■■□ 3.53
ESRRA-201ENST00000000442 EIF4G2P78344 907 aaKnown RBP eCLIP37.07■■■■□ 3.522e-8■■■■□ 24.1
ESRRA-201ENST00000000442 CARMIL2Q6F5E8 1435 aa37.07■■■■□ 3.52
ESRRA-201ENST00000000442 CDK11AQ9UQ88 783 aaPredicted RBP37.06■■■■□ 3.52
ESRRA-201ENST00000000442 NEFLP07196 543 aa37.04■■■■□ 3.52
ESRRA-201ENST00000000442 L3MBTL2Q969R5 705 aa37.04■■■■□ 3.52
ESRRA-201ENST00000000442 ANKRD30BQ9BXX2 1392 aa37.03■■■■□ 3.52
ESRRA-201ENST00000000442 RPRD2Q5VT52 1461 aaKnown RBP37.02■■■■□ 3.52
ESRRA-201ENST00000000442 BCANQ96GW7 911 aa37■■■■□ 3.51
ESRRA-201ENST00000000442 JPH4Q96JJ6 628 aa37■■■■□ 3.51
ESRRA-201ENST00000000442 FOXD1Q16676 465 aa36.98■■■■□ 3.51
ESRRA-201ENST00000000442 ZNF644Q9H582 1327 aaPredicted RBP36.97■■■■□ 3.51
ESRRA-201ENST00000000442 TROQ12816 1431 aaPredicted RBP36.96■■■■□ 3.51
ESRRA-201ENST00000000442 ITSN2Q9NZM3 1697 aa36.95■■■■□ 3.5
ESRRA-201ENST00000000442 TEX14Q8IWB6 1497 aa36.94■■■■□ 3.5
ESRRA-201ENST00000000442 CNTLNQ9NXG0 1405 aa36.93■■■■□ 3.5
ESRRA-201ENST00000000442 PLB1Q6P1J6 1458 aa36.92■■■■□ 3.5
ESRRA-201ENST00000000442 NCOA1Q15788 1441 aa36.89■■■■□ 3.5
ESRRA-201ENST00000000442 PRG4Q92954 1404 aaPredicted RBP36.89■■■■□ 3.5
ESRRA-201ENST00000000442 CAMSAP2Q08AD1 1489 aa36.89■■■■□ 3.5
ESRRA-201ENST00000000442 ADCY10Q96PN6 1610 aa36.88■■■■□ 3.49
ESRRA-201ENST00000000442 ADGBQ8N7X0 1667 aa36.88■■■■□ 3.49
ESRRA-201ENST00000000442 SLC4A1APQ9BWU0 796 aaKnown RBP36.87■■■■□ 3.49
ESRRA-201ENST00000000442 CCDC7Q96M83 1385 aa36.84■■■■□ 3.49
ESRRA-201ENST00000000442 GPATCH8Q9UKJ3 1502 aaKnown RBP36.82■■■■□ 3.48
ESRRA-201ENST00000000442 CFDP1Q9UEE9 299 aaPredicted RBP36.82■■■■□ 3.48
ESRRA-201ENST00000000442 HNRNPUQ00839 825 aaKnown RBP eCLIP36.81■■■■□ 3.48
ESRRA-201ENST00000000442 NBPF8Q3BBV2 869 aa36.81■■■■□ 3.48
ESRRA-201ENST00000000442 PZPP20742 1482 aa36.8■■■■□ 3.48
ESRRA-201ENST00000000442 CROCC2H7BZ55 1655 aa36.79■■■■□ 3.48
ESRRA-201ENST00000000442 POLR1AO95602 1720 aaPredicted RBP36.79■■■■□ 3.48
ESRRA-201ENST00000000442 ADGRL2O95490 1459 aa36.78■■■■□ 3.48
ESRRA-201ENST00000000442 KIF14Q15058 1648 aa36.78■■■■□ 3.48
ESRRA-201ENST00000000442 C11orf95C9JLR9 678 aaPredicted RBP36.77■■■■□ 3.48
ESRRA-201ENST00000000442 ABCA8O94911 1581 aa36.76■■■■□ 3.48
ESRRA-201ENST00000000442 SPATA31E1Q6ZUB1 1445 aa36.75■■■■□ 3.47
ESRRA-201ENST00000000442 PRKRIP1Q9H875 184 aaPredicted RBP36.69■■■■□ 3.46
ESRRA-201ENST00000000442 CHD1O14646 1710 aa36.67■■■■□ 3.46
ESRRA-201ENST00000000442 KIAA1107Q9UPP5 1409 aa36.66■■■■□ 3.46
ESRRA-201ENST00000000442 ANKRD30AQ9BXX3 1397 aa36.64■■■■□ 3.46
ESRRA-201ENST00000000442 MBD5Q9P267 1494 aa36.64■■■■□ 3.46
ESRRA-201ENST00000000442 ZNF777Q9ULD5 760 aaPredicted RBP36.62■■■■□ 3.45
ESRRA-201ENST00000000442 KIF7Q2M1P5 1343 aa36.62■■■■□ 3.45
ESRRA-201ENST00000000442 CDC42BPAQ5VT25 1732 aa36.59■■■■□ 3.45
ESRRA-201ENST00000000442 CCDC184Q52MB2 194 aa36.59■■■■□ 3.45
ESRRA-201ENST00000000442 ATP10BO94823 1461 aa36.59■■■■□ 3.45
ESRRA-201ENST00000000442 PLEKHD1A6NEE1 506 aa36.59■■■■□ 3.45
ESRRA-201ENST00000000442 PTPRGP23470 1445 aa36.56■■■■□ 3.44
ESRRA-201ENST00000000442 ANKRD50Q9ULJ7 1429 aa36.55■■■■□ 3.44
ESRRA-201ENST00000000442 SHANK2Q9UPX8 1470 aa36.55■■■■□ 3.44
ESRRA-201ENST00000000442 ABCC10Q5T3U5 1492 aa36.53■■■■□ 3.44
ESRRA-201ENST00000000442 PKD2Q13563 968 aa36.51■■■■□ 3.44
ESRRA-201ENST00000000442 MRS2Q9HD23 443 aa36.51■■■■□ 3.43
ESRRA-201ENST00000000442 SHROOM2Q13796 1616 aa36.5■■■■□ 3.43
ESRRA-201ENST00000000442 C9orf84Q5VXU9 1444 aa36.45■■■■□ 3.43
ESRRA-201ENST00000000442 FAM9BQ8IZU0 186 aa36.44■■■■□ 3.42
ESRRA-201ENST00000000442 USP47Q96K76 1375 aa36.44■■■■□ 3.42
ESRRA-201ENST00000000442 ERICH6BQ5W0A0 696 aa36.43■■■■□ 3.42
ESRRA-201ENST00000000442 ZBED9Q6R2W3 1325 aa36.43■■■■□ 3.42
ESRRA-201ENST00000000442 KDM5DQ9BY66 1539 aa36.42■■■■□ 3.42
ESRRA-201ENST00000000442 KDM5CP41229 1560 aa36.41■■■■□ 3.42
ESRRA-201ENST00000000442 RBM19Q9Y4C8 960 aaKnown RBP36.41■■■■□ 3.42
ESRRA-201ENST00000000442 BCORL1Q5H9F3 1711 aa36.41■■■■□ 3.42
ESRRA-201ENST00000000442 UHRF1BP1Q6BDS2 1440 aa36.4■■■■□ 3.42
ESRRA-201ENST00000000442 NUP155O75694 1391 aa36.38■■■■□ 3.41
ESRRA-201ENST00000000442 ARID4BQ4LE39 1312 aaPredicted RBP36.37■■■■□ 3.41
ESRRA-201ENST00000000442 DHX29Q7Z478 1369 aaKnown RBP36.36■■■■□ 3.41
ESRRA-201ENST00000000442 ARHGEF5Q12774 1597 aa36.35■■■■□ 3.41
ESRRA-201ENST00000000442 ARHGEF12Q9NZN5 1544 aa36.35■■■■□ 3.41
ESRRA-201ENST00000000442 RALGAPBQ86X10 1494 aa36.34■■■■□ 3.41
ESRRA-201ENST00000000442 IRX6P78412 446 aaPredicted RBP36.34■■■■□ 3.41
ESRRA-201ENST00000000442 ZNF326Q5BKZ1 582 aaKnown RBP36.34■■■■□ 3.41
ESRRA-201ENST00000000442 TSPY4P0CV99 314 aa36.33■■■■□ 3.41
ESRRA-201ENST00000000442 TSPY10P0CW01 314 aa36.33■■■■□ 3.41
ESRRA-201ENST00000000442 ANP32EQ9BTT0 268 aa36.33■■■■□ 3.41
ESRRA-201ENST00000000442 KIF15Q9NS87 1388 aa36.27■■■■□ 3.4
ESRRA-201ENST00000000442 ROCK2O75116 1388 aaKnown RBP36.23■■■■□ 3.39
ESRRA-201ENST00000000442 PPP4R2Q9NY27 417 aa36.22■■■■□ 3.39
ESRRA-201ENST00000000442 ABCC2Q92887 1545 aa36.21■■■■□ 3.39
ESRRA-201ENST00000000442 ERCC6L2Q5T890 1561 aa36.21■■■■□ 3.39
ESRRA-201ENST00000000442 PREX2Q70Z35 1606 aa36.2■■■■□ 3.39
ESRRA-201ENST00000000442 HNRNPMP52272 730 aaKnown RBP eCLIP36.2■■■■□ 3.392e-7■■■■□ 19.5
ESRRA-201ENST00000000442 CDC42BPBQ9Y5S2 1711 aa36.19■■■■□ 3.38
ESRRA-201ENST00000000442 CLASP1Q7Z460 1538 aa36.19■■■■□ 3.38
ESRRA-201ENST00000000442 CCDC141Q6ZP82 1450 aa36.18■■■■□ 3.38
ESRRA-201ENST00000000442 SAMD9LQ8IVG5 1584 aa36.18■■■■□ 3.38
ESRRA-201ENST00000000442 POLR3GLQ9BT43 218 aa36.18■■■■□ 3.38
ESRRA-201ENST00000000442 CARD11Q9BXL7 1154 aa36.17■■■■□ 3.38
ESRRA-201ENST00000000442 RSPH4AQ5TD94 716 aa36.12■■■■□ 3.37
ESRRA-201ENST00000000442 FAM135AQ9P2D6 1515 aa36.1■■■■□ 3.37
ESRRA-201ENST00000000442 SMG6Q86US8 1419 aaKnown RBP36.08■■■■□ 3.37
ESRRA-201ENST00000000442 DCAF11Q8TEB1 546 aa36.05■■■■□ 3.36
ESRRA-201ENST00000000442 KDM2AQ9Y2K7 1162 aa36.05■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms