RNA–Protein interactions for RNA: ENSMUST00000113055.8

Shroom3-203, Transcript of Protein Shroom3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shroom3, Length 6,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-203ENSMUST00000113055 SafbD3YXK2 937 aaKnown RBP18.93■□□□□ 0.62
Shroom3-203ENSMUST00000113055 Sart3Q9JLI8 962 aaKnown RBP18.93■□□□□ 0.62
Shroom3-203ENSMUST00000113055 Tmco5bQ80X59 307 aa18.93■□□□□ 0.62
Shroom3-203ENSMUST00000113055 Ppp1r18Q8BQ30 594 aa18.93■□□□□ 0.62
Shroom3-203ENSMUST00000113055 Speer4f1Q9D5Q6 258 aa18.92■□□□□ 0.62
Shroom3-203ENSMUST00000113055 MsnP26041 577 aaKnown RBP18.92■□□□□ 0.62
Shroom3-203ENSMUST00000113055 MecomP14404 1042 aa18.91■□□□□ 0.62
Shroom3-203ENSMUST00000113055 Tpm3-rs7D3Z2H9 248 aa18.91■□□□□ 0.62
Shroom3-203ENSMUST00000113055 Irx3P81067 507 aa18.89■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Q3TQI7 289 aaKnown RBP18.89■□□□□ 0.61
Shroom3-203ENSMUST00000113055 CrebrfQ8CDG5 640 aaKnown RBP18.89■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Sox12Q04890 314 aa18.89■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Znf330Q922H9 316 aa18.89■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Dnai2A2AC93 623 aa18.88■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Cluap1Q8R3P7 413 aa18.87■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Mbd3Q9Z2D8 285 aaKnown RBP18.86■□□□□ 0.61
Shroom3-203ENSMUST00000113055 AU015836B2RUM3 263 aa18.86■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Rb1cc1Q9ESK9 1588 aa18.86■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Birc3O08863 600 aa18.86■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Slc4a1apE9PX68 744 aa18.86■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Eea1Q8BL66 1411 aa18.85■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Supt16hQ920B9 1047 aa18.85■□□□□ 0.61
Shroom3-203ENSMUST00000113055 Chmp5Q9D7S9 219 aa18.83■□□□□ 0.61
Shroom3-203ENSMUST00000113055 BccipQ9CWI3 316 aa18.83■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Mfap1aC0HKD8 439 aaKnown RBP18.82■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Mfap1bC0HKD9 439 aaKnown RBP18.82■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Chmp3Q9CQ10 224 aa18.82■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Vps53Q8CCB4 832 aa18.82■□□□□ 0.6
Shroom3-203ENSMUST00000113055 U2af1Q9D883 239 aaKnown RBP18.82■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Gpatch11Q3UFS4 262 aa18.81■□□□□ 0.6
Shroom3-203ENSMUST00000113055 PtmsQ9D0J8 101 aaKnown RBP18.81■□□□□ 0.6
Shroom3-203ENSMUST00000113055 SetQ9EQU5 289 aaKnown RBP18.81■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Brpf1B2RRD7 1212 aa18.8■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Fhad1A6PWD2 1420 aa18.8■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Dnai1Q8C0M8 701 aa18.8■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Rsf1E9PWW9 1441 aaKnown RBP18.8■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Kiaa0754Q69ZZ9 979 aa18.8■□□□□ 0.6
Shroom3-203ENSMUST00000113055 GorabQ8BRM2 368 aa18.79■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Rundc1Q0VDN7 615 aa18.79■□□□□ 0.6
Shroom3-203ENSMUST00000113055 R3hcc1Q8BSI6 488 aa18.79■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Pde3bQ61409 1100 aa18.79■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Ifit1bl1D3Z6F0 470 aa18.78■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Ubap1lG3UW59 384 aa18.78■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Hspa5P20029 655 aaKnown RBP18.78■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Cald1E9QA15 768 aaKnown RBP18.78■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Ccdc18Q640L5 1455 aa18.77■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Psme1P97371 249 aa18.77■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Gtf2e1Q9D0D5 440 aa18.77■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Abcc8B2RUS7 1588 aa18.77■□□□□ 0.6
Shroom3-203ENSMUST00000113055 Pibf1E9Q6K3 756 aa18.77■□□□□ 0.59
Shroom3-203ENSMUST00000113055 EspnQ9ET47 871 aa18.76■□□□□ 0.59
Shroom3-203ENSMUST00000113055 RdxP26043 583 aaKnown RBP18.76■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Ppm1fQ8CGA0 452 aa18.75■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Tcerg1Q8CGF7 1100 aaKnown RBP18.74■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Map4P27546 1125 aaKnown RBP18.73■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Tmf1B9EKI3 1091 aa18.72■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Bcl11aQ9QYE3 773 aa18.72■□□□□ 0.59
Shroom3-203ENSMUST00000113055 MlecQ6ZQI3 291 aaKnown RBP18.72■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Spag9Q58A65 1321 aaKnown RBP18.72■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Arid3cA6PWV5 409 aa18.72■□□□□ 0.59
Shroom3-203ENSMUST00000113055 Arid4aF8VPQ2 1261 aaKnown RBP18.7■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Dcaf11Q91VU6 549 aa18.7■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Golga2Q921M4 999 aa18.7■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Tpd52l1O54818 204 aa18.7■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Tpm3P21107 285 aaKnown RBP18.7■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Exoc6Q8R313 802 aa18.69■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Txndc2Q6P902 515 aa18.69■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Ipo8Q7TMY7 1010 aa18.68■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Ccer1Q9CQL2 403 aa18.68■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Mia2Q91ZV0 1396 aa18.68■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Ftsj3Q9DBE9 838 aaKnown RBP18.67■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Smarce1O54941 411 aaKnown RBP18.67■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Taok2Q6ZQ29 1240 aa18.67■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Tomm22Q9CPQ3 142 aa18.67■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Podxl2Q8CAE9 603 aa18.66■□□□□ 0.58
Shroom3-203ENSMUST00000113055 HdgfP51859 237 aaKnown RBP18.66■□□□□ 0.58
Shroom3-203ENSMUST00000113055 SlkO54988 1233 aa18.66■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Ercc6F8VPZ5 1481 aa18.66■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Pkd2O35245 966 aa18.65■□□□□ 0.58
Shroom3-203ENSMUST00000113055 Kri1Q8VDQ9 704 aaKnown RBP18.64■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Trim30aP15533 496 aa18.64■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Sin3aQ60520 1274 aaKnown RBP18.62■□□□□ 0.57
Shroom3-203ENSMUST00000113055 CrbnQ8C7D2 445 aa18.62■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Ksr2Q3UVC0 959 aa18.62■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Slc4a10Q5DTL9 1118 aa18.62■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Ncbp3Q8BZR9 615 aaKnown RBP18.61■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Rrp12Q6P5B0 1295 aaKnown RBP18.61■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Pak3Q61036 559 aa18.61■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Zscan21Q07231 555 aa18.6■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Ipo9Q91YE6 1041 aa18.59■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Becn1O88597 448 aa18.58■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Ccdc47Q9D024 483 aaKnown RBP18.58■□□□□ 0.57
Shroom3-203ENSMUST00000113055 Ccdc146E9Q9F7 977 aa18.58■□□□□ 0.56
Shroom3-203ENSMUST00000113055 Trak1Q6PD31 939 aa18.57■□□□□ 0.56
Shroom3-203ENSMUST00000113055 Krt82Q99M74 516 aa18.56■□□□□ 0.56
Shroom3-203ENSMUST00000113055 Golga3P55937 1487 aa18.56■□□□□ 0.56
Shroom3-203ENSMUST00000113055 Gm21969J3QJZ1 289 aa18.56■□□□□ 0.56
Shroom3-203ENSMUST00000113055 Fam193aQ8CGI1 1231 aaKnown RBP18.56■□□□□ 0.56
Shroom3-203ENSMUST00000113055 Drc7Q6V3W6 876 aa18.55■□□□□ 0.56
Shroom3-203ENSMUST00000113055 Ciz1Q8VEH2 845 aa18.55■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms