RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 Tdrd9Q14BI7 1383 aa10.52□□□□□ -0.73
Bdnf-203ENSMUST00000111043 Zfp644E9QA22 1323 aa10.52□□□□□ -0.73
Bdnf-203ENSMUST00000111043 Pabpn1Q8CCS6 302 aaKnown RBP10.52□□□□□ -0.73
Bdnf-203ENSMUST00000111043 Gm14025A2AP89 1413 aa10.51□□□□□ -0.73
Bdnf-203ENSMUST00000111043 A2mQ6GQT1 1474 aa10.51□□□□□ -0.73
Bdnf-203ENSMUST00000111043 Hspa5P20029 655 aaKnown RBP10.5□□□□□ -0.73
Bdnf-203ENSMUST00000111043 NclP09405 707 aaKnown RBP10.49□□□□□ -0.73
Bdnf-203ENSMUST00000111043 Ccdc141E9Q8Q6 1531 aa10.49□□□□□ -0.73
Bdnf-203ENSMUST00000111043 Gtf3c5Q8R2T8 520 aa10.49□□□□□ -0.73
Bdnf-203ENSMUST00000111043 Rapgef6Q5NCJ1 1609 aa10.48□□□□□ -0.73
Bdnf-203ENSMUST00000111043 Mtus2Q3UHD3 1353 aa10.48□□□□□ -0.73
Bdnf-203ENSMUST00000111043 Q8BT18 775 aa10.47□□□□□ -0.73
Bdnf-203ENSMUST00000111043 Magi1Q6RHR9 1471 aa10.47□□□□□ -0.73
Bdnf-203ENSMUST00000111043 Prex2Q3LAC4 1598 aa10.46□□□□□ -0.73
Bdnf-203ENSMUST00000111043 Hnrnpul2Q00PI9 745 aaKnown RBP10.46□□□□□ -0.73
Bdnf-203ENSMUST00000111043 Abcc1O35379 1528 aa10.46□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Arhgef12Q8R4H2 1543 aaKnown RBP10.46□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Dnmt1P13864 1620 aaKnown RBP10.46□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Arhgef40Q3UPH7 1517 aa10.46□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Peg3Q3URU2 1571 aa10.45□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Ythdc2B2RR83 1445 aaKnown RBP10.45□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Phf23Q8BSN5 401 aa10.45□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Rrp7aQ9D1C9 280 aaKnown RBP10.45□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Naip2Q9QUK4 1447 aa10.44□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Ncoa2Q61026 1462 aa10.44□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Map3k4O08648 1597 aa10.44□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Fam163aQ8CAA5 168 aa10.44□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Mia2Q91ZV0 1396 aa10.43□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Abcc5Q9R1X5 1436 aa10.43□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Lmtk2Q3TYD6 1471 aa10.42□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Plekhh2Q8C115 1491 aa10.42□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Arhgef11Q68FM7 1552 aa10.42□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Sart1Q9Z315 806 aaKnown RBP10.42□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Mroh2aD3Z750 1679 aa10.42□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Eif5bQ05D44 1216 aaKnown RBP10.41□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Dhx57Q6P5D3 1388 aaKnown RBP10.41□□□□□ -0.74
Bdnf-203ENSMUST00000111043 SafbD3YXK2 937 aaKnown RBP10.41□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Mphosph9A6H5Y1 991 aa10.4□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Slc24a1Q91WD8 1130 aa10.4□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Znf608Q56A10 1511 aa10.4□□□□□ -0.74
Bdnf-203ENSMUST00000111043 Calr4Q3TQS0 420 aa10.4□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Kdm6bQ5NCY0 1641 aa10.39□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Fhad1A6PWD2 1420 aa10.39□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Kdm5bQ80Y84 1544 aa10.39□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Slc4a1apE9PX68 744 aa10.38□□□□□ -0.75
Bdnf-203ENSMUST00000111043 GapdhsQ64467 440 aa10.38□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Zcchc11B2RX14 1644 aaKnown RBP10.38□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Adcy10Q8C0T9 1614 aa10.37□□□□□ -0.75
Bdnf-203ENSMUST00000111043 PtprtQ99M80 1454 aa10.37□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Trak1Q6PD31 939 aa10.37□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Fancd2Q80V62 1450 aa10.36□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Trappc8E9PWG2 1437 aa10.36□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Gm156Q58A37 223 aa10.36□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Gapvd1Q6PAR5 1458 aa10.36□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Vps8Q0P5W1 1427 aa10.36□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Ccer2J3QPU5 274 aa10.36□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Atp10dQ8K2X1 1416 aa10.36□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Pkd2O35245 966 aa10.36□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Arhgap5P97393 1501 aa10.35□□□□□ -0.75
Bdnf-203ENSMUST00000111043 UacaQ8CGB3 1411 aa10.35□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Adgrb2Q8CGM1 1561 aa10.34□□□□□ -0.75
Bdnf-203ENSMUST00000111043 BccipQ9CWI3 316 aa10.34□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Kiaa1551Q5DTW7 1521 aa10.34□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Map3k5O35099 1380 aa10.34□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Cdc42bpaQ3UU96 1719 aa10.34□□□□□ -0.75
Bdnf-203ENSMUST00000111043 Ppp1r18Q8BQ30 594 aa10.33□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Erich6D3Z6S9 713 aa10.33□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Rgl3Q3UYI5 709 aa10.33□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Zbtb4Q5F293 982 aa10.33□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Arid3aQ62431 601 aa10.33□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Map4P27546 1125 aaKnown RBP10.33□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Mapkbp1Q6NS57 1503 aa10.32□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Gcc2Q8CHG3 1679 aa10.32□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Chd1P40201 1711 aa10.31□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Dennd4bQ3U1Y4 1499 aa10.31□□□□□ -0.76
Bdnf-203ENSMUST00000111043 TimelessQ9R1X4 1197 aa10.31□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Ttll5Q8CHB8 1328 aa10.31□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Sin3aQ60520 1274 aaKnown RBP10.3□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Rrbp1Q99PL5 1605 aaKnown RBP10.29□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Pknox2Q8BG99 474 aa10.29□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Nup155Q99P88 1391 aaKnown RBP10.28□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Grwd1Q810D6 446 aaKnown RBP10.28□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Dhx9O70133 1380 aaKnown RBP10.28□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Lemd3Q9WU40 921 aa10.28□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Mlh3A0A1Y7VMP7 1443 aa10.28□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Wdr43Q6ZQL4 677 aaKnown RBP10.28□□□□□ -0.76
Bdnf-203ENSMUST00000111043 NrdcQ8BHG1 1161 aa10.28□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Ccdc9Q8VC31 543 aaKnown RBP10.28□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Igf1rQ60751 1373 aa10.27□□□□□ -0.76
Bdnf-203ENSMUST00000111043 SphkapQ6NSW3 1687 aa10.27□□□□□ -0.76
Bdnf-203ENSMUST00000111043 Il16O54824 1322 aa10.27□□□□□ -0.77
Bdnf-203ENSMUST00000111043 Kif3bQ61771 747 aa10.26□□□□□ -0.77
Bdnf-203ENSMUST00000111043 Ppp4r2Q0VGB7 417 aa10.26□□□□□ -0.77
Bdnf-203ENSMUST00000111043 Rsph4aQ8BYM7 716 aa10.25□□□□□ -0.77
Bdnf-203ENSMUST00000111043 Wdr7Q920I9 1489 aa10.25□□□□□ -0.77
Bdnf-203ENSMUST00000111043 Usp47Q8BY87 1376 aa10.25□□□□□ -0.77
Bdnf-203ENSMUST00000111043 Cep170Q6A065 1588 aa10.24□□□□□ -0.77
Bdnf-203ENSMUST00000111043 Spag9Q58A65 1321 aaKnown RBP10.24□□□□□ -0.77
Bdnf-203ENSMUST00000111043 Kcna4Q61423 654 aa10.24□□□□□ -0.77
Bdnf-203ENSMUST00000111043 Kdm3bQ6ZPY7 1562 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms