RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 BC005561E9Q5E2 1589 aa20.76■□□□□ 0.91
Hmgb1-202ENSMUST00000093196 Naip2Q9QUK4 1447 aa20.7■□□□□ 0.9
Hmgb1-202ENSMUST00000093196 Zbtb22Q9Z0G7 638 aa20.68■□□□□ 0.9
Hmgb1-202ENSMUST00000093196 Rnf17Q99MV7 1640 aa20.67■□□□□ 0.9
Hmgb1-202ENSMUST00000093196 Lrrc43Q3V0L5 667 aa20.66■□□□□ 0.9
Hmgb1-202ENSMUST00000093196 MycnP03966 462 aaKnown RBP20.64■□□□□ 0.89
Hmgb1-202ENSMUST00000093196 Nkx1-1G3UXB3 402 aa20.63■□□□□ 0.89
Hmgb1-202ENSMUST00000093196 Lrrc9Q8CDN9 1456 aa20.59■□□□□ 0.89
Hmgb1-202ENSMUST00000093196 Grin2bQ01097 1482 aa20.56■□□□□ 0.88
Hmgb1-202ENSMUST00000093196 Map3k4O08648 1597 aa20.55■□□□□ 0.88
Hmgb1-202ENSMUST00000093196 Slc24a1Q91WD8 1130 aa20.55■□□□□ 0.88
Hmgb1-202ENSMUST00000093196 Abcc2Q8VI47 1543 aa20.53■□□□□ 0.88
Hmgb1-202ENSMUST00000093196 Arhgap27A2AB59 869 aa20.53■□□□□ 0.88
Hmgb1-202ENSMUST00000093196 Slc4a2P13808 1237 aaKnown RBP20.53■□□□□ 0.88
Hmgb1-202ENSMUST00000093196 Gpatch8A2A6A1 1505 aa20.52■□□□□ 0.87
Hmgb1-202ENSMUST00000093196 Ahdc1Q6PAL7 1594 aaKnown RBP20.51■□□□□ 0.87
Hmgb1-202ENSMUST00000093196 Pla2r1Q62028 1487 aa20.51■□□□□ 0.87
Hmgb1-202ENSMUST00000093196 SphkapQ6NSW3 1687 aa20.51■□□□□ 0.87
Hmgb1-202ENSMUST00000093196 Znf608Q56A10 1511 aa20.5■□□□□ 0.87
Hmgb1-202ENSMUST00000093196 Ferd3lQ923Z4 168 aa20.48■□□□□ 0.87
Hmgb1-202ENSMUST00000093196 Efcab5A0JP43 1406 aa20.47■□□□□ 0.87
Hmgb1-202ENSMUST00000093196 Jarid2Q62315 1234 aa20.47■□□□□ 0.87
Hmgb1-202ENSMUST00000093196 Neurl4Q5NCX5 1563 aa20.46■□□□□ 0.87
Hmgb1-202ENSMUST00000093196 AglF8VPN4 1532 aa20.44■□□□□ 0.86
Hmgb1-202ENSMUST00000093196 Ccdc136Q3TVA9 1136 aa20.44■□□□□ 0.86
Hmgb1-202ENSMUST00000093196 Abca16E9PWJ7 1678 aa20.42■□□□□ 0.86
Hmgb1-202ENSMUST00000093196 Mkrn3Q60764 544 aa20.4■□□□□ 0.86
Hmgb1-202ENSMUST00000093196 Scn4aQ9ER60 1841 aa20.4■□□□□ 0.86
Hmgb1-202ENSMUST00000093196 Zeb1Q64318 1117 aa20.39■□□□□ 0.85
Hmgb1-202ENSMUST00000093196 Fkbp15Q6P9Q6 1216 aaKnown RBP20.37■□□□□ 0.85
Hmgb1-202ENSMUST00000093196 TimelessQ9R1X4 1197 aa20.36■□□□□ 0.85
Hmgb1-202ENSMUST00000093196 Iqsec2Q5DU25 1478 aa20.35■□□□□ 0.85
Hmgb1-202ENSMUST00000093196 PxdnQ3UQ28 1475 aa20.34■□□□□ 0.85
Hmgb1-202ENSMUST00000093196 Igf1rQ60751 1373 aa20.33■□□□□ 0.84
Hmgb1-202ENSMUST00000093196 Slx4Q6P1D7 1565 aa20.32■□□□□ 0.84
Hmgb1-202ENSMUST00000093196 Hspa1lP16627 641 aa20.31■□□□□ 0.84
Hmgb1-202ENSMUST00000093196 Eif4g1Q6NZJ6 1600 aaKnown RBP20.31■□□□□ 0.84
Hmgb1-202ENSMUST00000093196 Jph4Q80WT0 628 aa20.3■□□□□ 0.84
Hmgb1-202ENSMUST00000093196 Qser1A2BIE1 1698 aa20.29■□□□□ 0.84
Hmgb1-202ENSMUST00000093196 Wdr7Q920I9 1489 aa20.27■□□□□ 0.84
Hmgb1-202ENSMUST00000093196 Camsap2Q8C1B1 1461 aa20.26■□□□□ 0.83
Hmgb1-202ENSMUST00000093196 Adamtsl3G3UXC7 1706 aa20.25■□□□□ 0.83
Hmgb1-202ENSMUST00000093196 Atp10aO54827 1508 aa20.25■□□□□ 0.83
Hmgb1-202ENSMUST00000093196 WizO88286 1684 aaKnown RBP20.24■□□□□ 0.83
Hmgb1-202ENSMUST00000093196 Vsig10D3YX43 558 aa20.24■□□□□ 0.83
Hmgb1-202ENSMUST00000093196 Fam117bQ3U3E2 584 aa20.24■□□□□ 0.83
Hmgb1-202ENSMUST00000093196 Hdac5Q9Z2V6 1113 aa20.24■□□□□ 0.83
Hmgb1-202ENSMUST00000093196 TchhA0A0B4J1F9 1599 aa20.23■□□□□ 0.83
Hmgb1-202ENSMUST00000093196 Kif14L0N7N1 1674 aaKnown RBP20.22■□□□□ 0.83
Hmgb1-202ENSMUST00000093196 Pip4k2bQ80XI4 416 aa20.21■□□□□ 0.83
Hmgb1-202ENSMUST00000093196 Dip2aQ8BWT5 1523 aa20.2■□□□□ 0.82
Hmgb1-202ENSMUST00000093196 Ncoa1P70365 1447 aa20.19■□□□□ 0.82
Hmgb1-202ENSMUST00000093196 Ildr2B5TVM2 661 aa20.18■□□□□ 0.82
Hmgb1-202ENSMUST00000093196 Repin1Q5U4E2 545 aa20.17■□□□□ 0.82
Hmgb1-202ENSMUST00000093196 Noa1Q9JJG9 693 aaKnown RBP20.17■□□□□ 0.82
Hmgb1-202ENSMUST00000093196 SynmQ70IV5 1561 aa20.14■□□□□ 0.81
Hmgb1-202ENSMUST00000093196 P3h3Q8CG70 732 aa20.13■□□□□ 0.81
Hmgb1-202ENSMUST00000093196 Kdm5bQ80Y84 1544 aa20.12■□□□□ 0.81
Hmgb1-202ENSMUST00000093196 Pde4dQ01063 747 aa20.11■□□□□ 0.81
Hmgb1-202ENSMUST00000093196 Rgl2Q61193 778 aa20.11■□□□□ 0.81
Hmgb1-202ENSMUST00000093196 Rsph6aQ8CDR2 708 aa20.1■□□□□ 0.81
Hmgb1-202ENSMUST00000093196 Znf704Q9ERQ3 566 aa20.1■□□□□ 0.81
Hmgb1-202ENSMUST00000093196 Adamts12Q811B3 1600 aa20.08■□□□□ 0.8
Hmgb1-202ENSMUST00000093196 Ltbp4Q8K4G1 1666 aa20.07■□□□□ 0.8
Hmgb1-202ENSMUST00000093196 Sra1Q80VJ2 232 aa20.06■□□□□ 0.8
Hmgb1-202ENSMUST00000093196 Shroom4Q1W617 1475 aa20.05■□□□□ 0.8
Hmgb1-202ENSMUST00000093196 Supt6hQ62383 1726 aaKnown RBP20.05■□□□□ 0.8
Hmgb1-202ENSMUST00000093196 Hnrnpul2Q00PI9 745 aaKnown RBP20.04■□□□□ 0.8
Hmgb1-202ENSMUST00000093196 Spryd3E9Q9B3 442 aa20.03■□□□□ 0.8
Hmgb1-202ENSMUST00000093196 Ubap1lG3UW59 384 aa20.03■□□□□ 0.8
Hmgb1-202ENSMUST00000093196 A2mQ6GQT1 1474 aa20.02■□□□□ 0.8
Hmgb1-202ENSMUST00000093196 Abca8bQ8K440 1620 aa20.02■□□□□ 0.79
Hmgb1-202ENSMUST00000093196 Safb2Q80YR5 991 aaKnown RBP20.01■□□□□ 0.79
Hmgb1-202ENSMUST00000093196 Slc4a5E9Q3M5 1116 aa20■□□□□ 0.79
Hmgb1-202ENSMUST00000093196 Rtl1Q7M732 1744 aa19.98■□□□□ 0.79
Hmgb1-202ENSMUST00000093196 OvosQ3UU35 1456 aa19.96■□□□□ 0.79
Hmgb1-202ENSMUST00000093196 Cul7Q8VE73 1689 aa19.96■□□□□ 0.79
Hmgb1-202ENSMUST00000093196 Atp10dQ8K2X1 1416 aa19.95■□□□□ 0.78
Hmgb1-202ENSMUST00000093196 UncxO08934 530 aa19.95■□□□□ 0.78
Hmgb1-202ENSMUST00000093196 NhsB1AV60 1647 aa19.94■□□□□ 0.78
Hmgb1-202ENSMUST00000093196 Synj2Q9D2G5 1434 aa19.93■□□□□ 0.78
Hmgb1-202ENSMUST00000093196 Fmn1Q05860 1466 aa19.92■□□□□ 0.78
Hmgb1-202ENSMUST00000093196 Rrbp1Q99PL5 1605 aaKnown RBP19.91■□□□□ 0.78
Hmgb1-202ENSMUST00000093196 Abca5Q8K448 1642 aa19.89■□□□□ 0.77
Hmgb1-202ENSMUST00000093196 Gemin5Q8BX17 1502 aaKnown RBP19.86■□□□□ 0.77
Hmgb1-202ENSMUST00000093196 Gm13697A2AK42 830 aa19.86■□□□□ 0.77
Hmgb1-202ENSMUST00000093196 Gli3Q61602 1583 aa19.86■□□□□ 0.77
Hmgb1-202ENSMUST00000093196 Rpap1Q80TE0 1409 aa19.84■□□□□ 0.77
Hmgb1-202ENSMUST00000093196 Map4k4P97820 1233 aaKnown RBP19.83■□□□□ 0.77
Hmgb1-202ENSMUST00000093196 Chrm1P12657 460 aa19.82■□□□□ 0.76
Hmgb1-202ENSMUST00000093196 Topaz1E5FYH1 1653 aa19.81■□□□□ 0.76
Hmgb1-202ENSMUST00000093196 4930407I10RikD3Z5T8 1512 aa19.81■□□□□ 0.76
Hmgb1-202ENSMUST00000093196 Arhgef40Q3UPH7 1517 aa19.81■□□□□ 0.76
Hmgb1-202ENSMUST00000093196 Zranb1Q7M760 708 aa19.8■□□□□ 0.76
Hmgb1-202ENSMUST00000093196 Cadps2Q8BYR5 1297 aa19.8■□□□□ 0.76
Hmgb1-202ENSMUST00000093196 Bcl11bQ99PV8 884 aa19.8■□□□□ 0.76
Hmgb1-202ENSMUST00000093196 Polr1aO35134 1717 aaKnown RBP19.77■□□□□ 0.76
Hmgb1-202ENSMUST00000093196 Zbtb7bQ64321 544 aa19.77■□□□□ 0.76
Hmgb1-202ENSMUST00000093196 Med1Q925J9 1575 aa19.76■□□□□ 0.75
Hmgb1-202ENSMUST00000093196 NpatQ8BMA5 1420 aa19.76■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms