RNA–Protein interactions for RNA: ENSMUST00000075141.6

Trim17-202, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim17, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-202ENSMUST00000075141 Kcna4Q61423 654 aa12.44□□□□□ -0.42
Trim17-202ENSMUST00000075141 Dennd4bQ3U1Y4 1499 aa12.44□□□□□ -0.42
Trim17-202ENSMUST00000075141 Hsp90aa1P07901 733 aaKnown RBP12.44□□□□□ -0.42
Trim17-202ENSMUST00000075141 Grwd1Q810D6 446 aaKnown RBP12.44□□□□□ -0.42
Trim17-202ENSMUST00000075141 Zbtb7cQ8VCZ7 619 aa12.44□□□□□ -0.42
Trim17-202ENSMUST00000075141 Ncoa1P70365 1447 aa12.43□□□□□ -0.42
Trim17-202ENSMUST00000075141 Ubl4bQ9CQ84 188 aa12.42□□□□□ -0.42
Trim17-202ENSMUST00000075141 Crocc2F6XLV1 1638 aa12.42□□□□□ -0.42
Trim17-202ENSMUST00000075141 Plcd4Q8K3R3 807 aa12.42□□□□□ -0.42
Trim17-202ENSMUST00000075141 Wdr62Q3U3T8 1523 aa12.41□□□□□ -0.42
Trim17-202ENSMUST00000075141 Gtf3c3Q3TMP1 882 aa12.41□□□□□ -0.42
Trim17-202ENSMUST00000075141 Camsap2Q8C1B1 1461 aa12.41□□□□□ -0.42
Trim17-202ENSMUST00000075141 Rundc1Q0VDN7 615 aa12.4□□□□□ -0.42
Trim17-202ENSMUST00000075141 Urb2E9Q7L1 1524 aaKnown RBP12.4□□□□□ -0.42
Trim17-202ENSMUST00000075141 Cux2P70298 1426 aa12.4□□□□□ -0.42
Trim17-202ENSMUST00000075141 B4galnt3Q6L8S8 986 aa12.39□□□□□ -0.43
Trim17-202ENSMUST00000075141 NeflP08551 543 aa12.39□□□□□ -0.43
Trim17-202ENSMUST00000075141 Rad54l2Q99NG0 1466 aa12.37□□□□□ -0.43
Trim17-202ENSMUST00000075141 Pprc1Q6NZN1 1644 aa12.37□□□□□ -0.43
Trim17-202ENSMUST00000075141 Dbr1Q923B1 550 aa12.37□□□□□ -0.43
Trim17-202ENSMUST00000075141 Card11Q8CIS0 1159 aa12.37□□□□□ -0.43
Trim17-202ENSMUST00000075141 Irx3P81067 507 aa12.35□□□□□ -0.43
Trim17-202ENSMUST00000075141 Iqcf3Q9D498 203 aa12.35□□□□□ -0.43
Trim17-202ENSMUST00000075141 Ercc6F8VPZ5 1481 aa12.35□□□□□ -0.43
Trim17-202ENSMUST00000075141 Kif27Q7M6Z4 1394 aa12.35□□□□□ -0.43
Trim17-202ENSMUST00000075141 LrpprcQ6PB66 1392 aaKnown RBP12.33□□□□□ -0.43
Trim17-202ENSMUST00000075141 Thoc2B1AZI6 1594 aaKnown RBP12.33□□□□□ -0.44
Trim17-202ENSMUST00000075141 Duox2A2AQ99 1517 aa12.33□□□□□ -0.44
Trim17-202ENSMUST00000075141 Rpgrip1lQ8CG73 1264 aa12.32□□□□□ -0.44
Trim17-202ENSMUST00000075141 Dhx9O70133 1380 aaKnown RBP12.32□□□□□ -0.44
Trim17-202ENSMUST00000075141 CanxP35564 591 aaKnown RBP12.32□□□□□ -0.44
Trim17-202ENSMUST00000075141 Erbb3Q61526 1339 aa12.32□□□□□ -0.44
Trim17-202ENSMUST00000075141 Dapk1Q80YE7 1442 aa12.32□□□□□ -0.44
Trim17-202ENSMUST00000075141 ArxO35085 564 aa12.32□□□□□ -0.44
Trim17-202ENSMUST00000075141 Trak1Q6PD31 939 aa12.31□□□□□ -0.44
Trim17-202ENSMUST00000075141 Apbb1Q9QXJ1 710 aa12.31□□□□□ -0.44
Trim17-202ENSMUST00000075141 Cul7Q8VE73 1689 aa12.31□□□□□ -0.44
Trim17-202ENSMUST00000075141 Q7TT23 1179 aa12.3□□□□□ -0.44
Trim17-202ENSMUST00000075141 Anp32bQ9EST5 272 aaKnown RBP12.3□□□□□ -0.44
Trim17-202ENSMUST00000075141 Unc13aQ4KUS2 1712 aa12.3□□□□□ -0.44
Trim17-202ENSMUST00000075141 Mug1P28665 1476 aa12.3□□□□□ -0.44
Trim17-202ENSMUST00000075141 Cwc22Q8C5N3 908 aaKnown RBP12.29□□□□□ -0.44
Trim17-202ENSMUST00000075141 Zfp444Q3TDV8 331 aaKnown RBP12.29□□□□□ -0.44
Trim17-202ENSMUST00000075141 Peg3Q3URU2 1571 aa12.29□□□□□ -0.44
Trim17-202ENSMUST00000075141 Ift140E9PY46 1464 aa12.29□□□□□ -0.44
Trim17-202ENSMUST00000075141 Rprd2Q6NXI6 1469 aaKnown RBP12.28□□□□□ -0.44
Trim17-202ENSMUST00000075141 NexmifQ5DTT1 1515 aa12.27□□□□□ -0.45
Trim17-202ENSMUST00000075141 EprsQ8CGC7 1512 aaKnown RBP12.26□□□□□ -0.45
Trim17-202ENSMUST00000075141 Ttll13A4Q9F6 804 aa12.26□□□□□ -0.45
Trim17-202ENSMUST00000075141 Samd9lQ69Z37 1561 aa12.26□□□□□ -0.45
Trim17-202ENSMUST00000075141 PogzQ8BZH4 1409 aaKnown RBP12.26□□□□□ -0.45
Trim17-202ENSMUST00000075141 Sart3Q9JLI8 962 aaKnown RBP12.25□□□□□ -0.45
Trim17-202ENSMUST00000075141 Mtus2Q3UHD3 1353 aa12.24□□□□□ -0.45
Trim17-202ENSMUST00000075141 Plekhg5Q66T02 1073 aa12.24□□□□□ -0.45
Trim17-202ENSMUST00000075141 Ccdc9Q8VC31 543 aaKnown RBP12.24□□□□□ -0.45
Trim17-202ENSMUST00000075141 BC005561E9Q5E2 1589 aa12.24□□□□□ -0.45
Trim17-202ENSMUST00000075141 Abcc5Q9R1X5 1436 aa12.23□□□□□ -0.45
Trim17-202ENSMUST00000075141 SynmQ70IV5 1561 aa12.23□□□□□ -0.45
Trim17-202ENSMUST00000075141 Gpatch8A2A6A1 1505 aa12.22□□□□□ -0.45
Trim17-202ENSMUST00000075141 Zscan21Q07231 555 aa12.22□□□□□ -0.45
Trim17-202ENSMUST00000075141 Plekhh2Q8C115 1491 aa12.22□□□□□ -0.45
Trim17-202ENSMUST00000075141 Ttll5Q8CHB8 1328 aa12.22□□□□□ -0.45
Trim17-202ENSMUST00000075141 Mak16Q8BGS0 296 aaKnown RBP12.21□□□□□ -0.45
Trim17-202ENSMUST00000075141 Fkbp15Q6P9Q6 1216 aaKnown RBP12.21□□□□□ -0.45
Trim17-202ENSMUST00000075141 Prdm10Q3UTQ7 1184 aa12.21□□□□□ -0.46
Trim17-202ENSMUST00000075141 CrbnQ8C7D2 445 aa12.21□□□□□ -0.46
Trim17-202ENSMUST00000075141 CatipB9EKE5 520 aa12.2□□□□□ -0.46
Trim17-202ENSMUST00000075141 Lmtk2Q3TYD6 1471 aa12.19□□□□□ -0.46
Trim17-202ENSMUST00000075141 CadpsQ80TJ1 1355 aa12.19□□□□□ -0.46
Trim17-202ENSMUST00000075141 Esx1O88933 382 aa12.19□□□□□ -0.46
Trim17-202ENSMUST00000075141 Prkrip1Q9CWV6 186 aaKnown RBP12.19□□□□□ -0.46
Trim17-202ENSMUST00000075141 Dhx57Q6P5D3 1388 aaKnown RBP12.19□□□□□ -0.46
Trim17-202ENSMUST00000075141 Myom3A2ABU4 1439 aa12.18□□□□□ -0.46
Trim17-202ENSMUST00000075141 Kank1E9Q238 1360 aa12.18□□□□□ -0.46
Trim17-202ENSMUST00000075141 Polr1aO35134 1717 aaKnown RBP12.17□□□□□ -0.46
Trim17-202ENSMUST00000075141 4930567H17RikQ3V0K5 233 aa12.17□□□□□ -0.46
Trim17-202ENSMUST00000075141 Pik3c2gO70167 1506 aa12.17□□□□□ -0.46
Trim17-202ENSMUST00000075141 Neurod2Q62414 383 aa12.16□□□□□ -0.46
Trim17-202ENSMUST00000075141 Arhgef40Q3UPH7 1517 aa12.16□□□□□ -0.46
Trim17-202ENSMUST00000075141 Phldb1Q6PDH0 1371 aaKnown RBP12.16□□□□□ -0.46
Trim17-202ENSMUST00000075141 Mug2P28666 1451 aa12.15□□□□□ -0.46
Trim17-202ENSMUST00000075141 Disp1Q3TDN0 1521 aa12.15□□□□□ -0.46
Trim17-202ENSMUST00000075141 Fhod3Q76LL6 1578 aa12.15□□□□□ -0.46
Trim17-202ENSMUST00000075141 Inpp5dQ9ES52 1191 aa12.15□□□□□ -0.46
Trim17-202ENSMUST00000075141 Adgrb2Q8CGM1 1561 aa12.15□□□□□ -0.46
Trim17-202ENSMUST00000075141 Pank3Q8R2W9 370 aa12.15□□□□□ -0.46
Trim17-202ENSMUST00000075141 Ipo4Q8VI75 1082 aa12.15□□□□□ -0.46
Trim17-202ENSMUST00000075141 Chmp5Q9D7S9 219 aa12.15□□□□□ -0.46
Trim17-202ENSMUST00000075141 Soga1E1U8D0 1418 aa12.15□□□□□ -0.46
Trim17-202ENSMUST00000075141 Cdk13Q69ZA1 1511 aaKnown RBP12.14□□□□□ -0.47
Trim17-202ENSMUST00000075141 Trim30dE9PWL0 497 aa12.14□□□□□ -0.47
Trim17-202ENSMUST00000075141 Spryd3E9Q9B3 442 aa12.14□□□□□ -0.47
Trim17-202ENSMUST00000075141 WrnO09053 1401 aa12.14□□□□□ -0.47
Trim17-202ENSMUST00000075141 Nkx1-2P42580 305 aa12.14□□□□□ -0.47
Trim17-202ENSMUST00000075141 Dnai1Q8C0M8 701 aa12.14□□□□□ -0.47
Trim17-202ENSMUST00000075141 Setbp1Q9Z180 1582 aa12.14□□□□□ -0.47
Trim17-202ENSMUST00000075141 Kif14L0N7N1 1674 aaKnown RBP12.13□□□□□ -0.47
Trim17-202ENSMUST00000075141 Map4P27546 1125 aaKnown RBP12.13□□□□□ -0.47
Trim17-202ENSMUST00000075141 Kdm6bQ5NCY0 1641 aa12.13□□□□□ -0.47
Trim17-202ENSMUST00000075141 Rfx7F8VPJ6 1459 aa12.13□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms