RNA–Protein interactions for RNA: ENSMUST00000055296.10

Polr1a-201, Transcript of DNA-directed RNA polymerase I subunit RPA1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr1a, Length 9,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1a-201ENSMUST00000055296 Ccdc18Q640L5 1455 aa11.05□□□□□ -0.64
Polr1a-201ENSMUST00000055296 Tpd52l1O54818 204 aa11.05□□□□□ -0.64
Polr1a-201ENSMUST00000055296 NudcO35685 332 aaKnown RBP11.04□□□□□ -0.64
Polr1a-201ENSMUST00000055296 Kri1Q8VDQ9 704 aaKnown RBP11.04□□□□□ -0.64
Polr1a-201ENSMUST00000055296 Becn1O88597 448 aa11.03□□□□□ -0.64
Polr1a-201ENSMUST00000055296 Kdm5dQ62240 1548 aa11.03□□□□□ -0.64
Polr1a-201ENSMUST00000055296 Tpm4Q6IRU2 248 aa11.03□□□□□ -0.64
Polr1a-201ENSMUST00000055296 Trim30aP15533 496 aa11.03□□□□□ -0.64
Polr1a-201ENSMUST00000055296 Tomm22Q9CPQ3 142 aa11.02□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Stag3O70576 1240 aa11.02□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Ppm1fQ8CGA0 452 aa11.02□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Bcl11aQ9QYE3 773 aa11.01□□□□□ -0.65
Polr1a-201ENSMUST00000055296 MecomP14404 1042 aa11.01□□□□□ -0.65
Polr1a-201ENSMUST00000055296 PtmsQ9D0J8 101 aaKnown RBP11.01□□□□□ -0.65
Polr1a-201ENSMUST00000055296 IbspQ61711 324 aa11□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Rsf1E9PWW9 1441 aaKnown RBP10.99□□□□□ -0.65
Polr1a-201ENSMUST00000055296 CalrP14211 416 aaKnown RBP10.99□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Grwd1Q810D6 446 aaKnown RBP10.99□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Gm20521D3Z5F7 333 aa10.98□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Plin1Q8CGN5 517 aa10.98□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Odf2A3KGV1 830 aaKnown RBP10.98□□□□□ -0.65
Polr1a-201ENSMUST00000055296 U2surpQ6NV83 1029 aaKnown RBP10.98□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Rtf1A2AQ19 715 aaKnown RBP10.98□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Hdgfl1Q2VPR5 283 aa10.98□□□□□ -0.65
Polr1a-201ENSMUST00000055296 HnrnpuQ8VEK3 800 aaKnown RBP10.98□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Drc7Q6V3W6 876 aa10.97□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Tnnt1O88346 262 aa10.97□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Cnga1P29974 684 aa10.97□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Ecm2Q5FW85 670 aa10.97□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Tpm2P58774 284 aa10.96□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Ccer1Q9CQL2 403 aa10.96□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Sart3Q9JLI8 962 aaKnown RBP10.96□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Kif15Q6P9L6 1387 aa10.96□□□□□ -0.65
Polr1a-201ENSMUST00000055296 Zfp777B9EKF4 885 aa10.96□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Ccdc43Q9CR29 222 aaKnown RBP10.95□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Ubap1lG3UW59 384 aa10.95□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Mroh3A0A1D5RM54 893 aa10.95□□□□□ -0.66
Polr1a-201ENSMUST00000055296 AcrbpQ3V140 540 aa10.95□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Rrp12Q6P5B0 1295 aaKnown RBP10.95□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Chmp3Q9CQ10 224 aa10.95□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Ripply1Q2WG77 201 aa10.95□□□□□ -0.66
Polr1a-201ENSMUST00000055296 BlmO88700 1416 aa10.94□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Zrsr2Q62377 462 aaKnown RBP10.94□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Dusp9Q7TNL7 452 aa10.94□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Pde3bQ61409 1100 aa10.94□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Tpm1P58771 284 aa10.93□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Krt82Q99M74 516 aa10.93□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Samd1D3YXK1 519 aa10.93□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Cep164Q5DU05 1446 aa10.93□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Brpf1B2RRD7 1212 aa10.92□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Card11Q8CIS0 1159 aa10.92□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Slc4a3P16283 1227 aa10.91□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Stk24Q99KH8 431 aa10.91□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Ccdc47Q9D024 483 aaKnown RBP10.91□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Gm21969J3QJZ1 289 aa10.91□□□□□ -0.66
Polr1a-201ENSMUST00000055296 4933402E13RikQ9D4D2 429 aa10.9□□□□□ -0.66
Polr1a-201ENSMUST00000055296 Mex3cQ05A36 652 aaKnown RBP10.9□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Smarce1O54941 411 aaKnown RBP10.9□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Rsph6aQ8CDR2 708 aa10.9□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Ccdc34Q3UI66 367 aa10.89□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Gabpb2P81069 414 aa10.89□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Fnbp4Q6ZQ03 1031 aa10.89□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Rufy1Q8BIJ7 712 aa10.88□□□□□ -0.67
Polr1a-201ENSMUST00000055296 A0A0U1RNP2 1173 aa10.88□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Pds5bQ4VA53 1446 aaKnown RBP10.88□□□□□ -0.67
Polr1a-201ENSMUST00000055296 GorabQ8BRM2 368 aa10.88□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Ipo4Q8VI75 1082 aa10.88□□□□□ -0.67
Polr1a-201ENSMUST00000055296 SlkO54988 1233 aa10.87□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Fbxo2Q80UW2 297 aa10.87□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Rwdd1Q9CQK7 243 aa10.87□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Q3TQI7 289 aaKnown RBP10.87□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Dnai1Q8C0M8 701 aa10.87□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Mfap1aC0HKD8 439 aaKnown RBP10.86□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Mfap1bC0HKD9 439 aaKnown RBP10.86□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Cspp1B2RX88 1205 aa10.86□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Tmco5bQ80X59 307 aa10.86□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Znf704Q9ERQ3 566 aa10.86□□□□□ -0.67
Polr1a-201ENSMUST00000055296 BbxQ8VBW5 907 aa10.85□□□□□ -0.67
Polr1a-201ENSMUST00000055296 VgfQ0VGU4 617 aa10.85□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Ipo7Q9EPL8 1038 aaKnown RBP10.85□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Senp3Q9EP97 568 aaKnown RBP10.84□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Sf3a1Q8K4Z5 791 aaKnown RBP10.84□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Mbd3Q9Z2D8 285 aaKnown RBP10.84□□□□□ -0.67
Polr1a-201ENSMUST00000055296 Hap1O35668 628 aa10.83□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Sycp1Q62209 993 aa10.83□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Ccdc96Q9CR92 584 aa10.83□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Chaf1aQ9QWF0 911 aa10.83□□□□□ -0.68
Polr1a-201ENSMUST00000055296 1700123L14RikQ3V2K7 440 aa10.82□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Znf330Q922H9 316 aa10.82□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Ciz1Q8VEH2 845 aa10.82□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Znhit6Q3UFB2 460 aaKnown RBP10.82□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Arhgap27A2AB59 869 aa10.81□□□□□ -0.68
Polr1a-201ENSMUST00000055296 HmmrQ00547 794 aaKnown RBP10.81□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Wdr78E9PYY5 807 aa10.81□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Nap1l1P28656 391 aaKnown RBP10.81□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Taf3Q5HZG4 932 aa10.81□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Dctn1O08788 1281 aa10.81□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Cluap1Q8R3P7 413 aa10.8□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Ddrgk1Q80WW9 315 aa10.8□□□□□ -0.68
Polr1a-201ENSMUST00000055296 Spag9Q58A65 1321 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms