RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Rgl3Q3UYI5 709 aa22.24■■□□□ 1.15
Ckap4-201ENSMUST00000053871 Adamts12Q811B3 1600 aa22.23■■□□□ 1.15
Ckap4-201ENSMUST00000053871 Arhgef40Q3UPH7 1517 aa22.22■■□□□ 1.15
Ckap4-201ENSMUST00000053871 Mrs2Q5NCE8 434 aa22.22■■□□□ 1.15
Ckap4-201ENSMUST00000053871 Gcc2Q8CHG3 1679 aa22.2■■□□□ 1.14
Ckap4-201ENSMUST00000053871 Wwc2Q6NXJ0 1187 aa22.19■■□□□ 1.14
Ckap4-201ENSMUST00000053871 Fam71e1A1L3C1 212 aa22.17■■□□□ 1.14
Ckap4-201ENSMUST00000053871 Cul7Q8VE73 1689 aa22.16■■□□□ 1.14
Ckap4-201ENSMUST00000053871 Calr4Q3TQS0 420 aa22.15■■□□□ 1.14
Ckap4-201ENSMUST00000053871 Setd1bQ8CFT2 1985 aa22.14■■□□□ 1.14
Ckap4-201ENSMUST00000053871 Kdm6bQ5NCY0 1641 aa22.14■■□□□ 1.14
Ckap4-201ENSMUST00000053871 Camsap2Q8C1B1 1461 aa22.14■■□□□ 1.13
Ckap4-201ENSMUST00000053871 Trak1Q6PD31 939 aa22.13■■□□□ 1.13
Ckap4-201ENSMUST00000053871 Abca16E9PWJ7 1678 aa22.13■■□□□ 1.13
Ckap4-201ENSMUST00000053871 Cc2d2bA0A286YDU8 1405 aa22.13■■□□□ 1.13
Ckap4-201ENSMUST00000053871 Arhgap31A6X8Z5 1425 aa22.12■■□□□ 1.13
Ckap4-201ENSMUST00000053871 Dhx9O70133 1380 aaKnown RBP22.11■■□□□ 1.13
Ckap4-201ENSMUST00000053871 Rfx7F8VPJ6 1459 aa22.1■■□□□ 1.13
Ckap4-201ENSMUST00000053871 Grwd1Q810D6 446 aaKnown RBP22.1■■□□□ 1.13
Ckap4-201ENSMUST00000053871 Zbtb4Q5F293 982 aa22.09■■□□□ 1.13
Ckap4-201ENSMUST00000053871 P3h3Q8CG70 732 aa22.09■■□□□ 1.13
Ckap4-201ENSMUST00000053871 Rapgef6Q5NCJ1 1609 aa22.09■■□□□ 1.13
Ckap4-201ENSMUST00000053871 NrdcQ8BHG1 1161 aa22.09■■□□□ 1.13
Ckap4-201ENSMUST00000053871 Adgrb2Q8CGM1 1561 aa22.09■■□□□ 1.13
Ckap4-201ENSMUST00000053871 Exoc6Q8R313 802 aa22.08■■□□□ 1.13
Ckap4-201ENSMUST00000053871 Tdrd9Q14BI7 1383 aa22.08■■□□□ 1.12
Ckap4-201ENSMUST00000053871 Rprd2Q6NXI6 1469 aaKnown RBP22.07■■□□□ 1.12
Ckap4-201ENSMUST00000053871 Nup160Q9Z0W3 1402 aaKnown RBP22.06■■□□□ 1.12
Ckap4-201ENSMUST00000053871 Fhod3Q76LL6 1578 aa22.05■■□□□ 1.12
Ckap4-201ENSMUST00000053871 Shroom2A2ALU4 1481 aa22.05■■□□□ 1.12
Ckap4-201ENSMUST00000053871 SphkapQ6NSW3 1687 aa22.05■■□□□ 1.12
Ckap4-201ENSMUST00000053871 Ttll5Q8CHB8 1328 aa22.04■■□□□ 1.12
Ckap4-201ENSMUST00000053871 Adcy10Q8C0T9 1614 aa22.04■■□□□ 1.12
Ckap4-201ENSMUST00000053871 Slc4a2P13808 1237 aaKnown RBP22.02■■□□□ 1.12
Ckap4-201ENSMUST00000053871 Rundc1Q0VDN7 615 aa22.01■■□□□ 1.11
Ckap4-201ENSMUST00000053871 Ncoa1P70365 1447 aa22■■□□□ 1.11
Ckap4-201ENSMUST00000053871 Arhgef11Q68FM7 1552 aa21.99■■□□□ 1.11
Ckap4-201ENSMUST00000053871 Anp32aO35381 247 aa21.98■■□□□ 1.11
Ckap4-201ENSMUST00000053871 Setbp1Q9Z180 1582 aa21.98■■□□□ 1.11
Ckap4-201ENSMUST00000053871 Abcc2Q8VI47 1543 aa21.97■■□□□ 1.11
Ckap4-201ENSMUST00000053871 Pprc1Q6NZN1 1644 aa21.97■■□□□ 1.11
Ckap4-201ENSMUST00000053871 Il16O54824 1322 aa21.97■■□□□ 1.11
Ckap4-201ENSMUST00000053871 Kdm3bQ6ZPY7 1562 aa21.96■■□□□ 1.11
Ckap4-201ENSMUST00000053871 Card11Q8CIS0 1159 aa21.95■■□□□ 1.11
Ckap4-201ENSMUST00000053871 Map4P27546 1125 aaKnown RBP21.95■■□□□ 1.1
Ckap4-201ENSMUST00000053871 Magi1Q6RHR9 1471 aa21.95■■□□□ 1.1
Ckap4-201ENSMUST00000053871 AlkP97793 1621 aa21.94■■□□□ 1.1
Ckap4-201ENSMUST00000053871 Gm13695A2AK44 830 aa21.94■■□□□ 1.1
Ckap4-201ENSMUST00000053871 Dapk1Q80YE7 1442 aa21.94■■□□□ 1.1
Ckap4-201ENSMUST00000053871 Prex2Q3LAC4 1598 aa21.94■■□□□ 1.1
Ckap4-201ENSMUST00000053871 Nolc1E9Q5C9 702 aaKnown RBP21.94■■□□□ 1.1
Ckap4-201ENSMUST00000053871 Nup155Q99P88 1391 aaKnown RBP21.93■■□□□ 1.1
Ckap4-201ENSMUST00000053871 Pik3c2gO70167 1506 aa21.93■■□□□ 1.1
Ckap4-201ENSMUST00000053871 Cdc42bpaQ3UU96 1719 aa21.92■■□□□ 1.1
Ckap4-201ENSMUST00000053871 AknaQ80VW7 1404 aa21.91■■□□□ 1.1
Ckap4-201ENSMUST00000053871 Dhx57Q6P5D3 1388 aaKnown RBP21.91■■□□□ 1.1
Ckap4-201ENSMUST00000053871 Rrp7aQ9D1C9 280 aaKnown RBP21.91■■□□□ 1.1
Ckap4-201ENSMUST00000053871 Ccdc141E9Q8Q6 1531 aa21.9■■□□□ 1.1
Ckap4-201ENSMUST00000053871 Fam163aQ8CAA5 168 aa21.88■■□□□ 1.09
Ckap4-201ENSMUST00000053871 Ppp4r2Q0VGB7 417 aa21.88■■□□□ 1.09
Ckap4-201ENSMUST00000053871 Jph4Q80WT0 628 aa21.88■■□□□ 1.09
Ckap4-201ENSMUST00000053871 Kiaa1551Q5DTW7 1521 aa21.87■■□□□ 1.09
Ckap4-201ENSMUST00000053871 Ifnlr1Q8CGK5 535 aa21.87■■□□□ 1.09
Ckap4-201ENSMUST00000053871 Neo1P97798 1493 aa21.86■■□□□ 1.09
Ckap4-201ENSMUST00000053871 Cwc22Q8C5N3 908 aaKnown RBP21.85■■□□□ 1.09
Ckap4-201ENSMUST00000053871 Lrriq1Q0P5X1 1673 aa21.84■■□□□ 1.09
Ckap4-201ENSMUST00000053871 Mroh2aD3Z750 1679 aa21.83■■□□□ 1.08
Ckap4-201ENSMUST00000053871 Kif14L0N7N1 1674 aaKnown RBP21.83■■□□□ 1.08
Ckap4-201ENSMUST00000053871 Supt6hQ62383 1726 aaKnown RBP21.83■■□□□ 1.08
Ckap4-201ENSMUST00000053871 Pbrm1Q8BSQ9 1634 aaKnown RBP21.82■■□□□ 1.08
Ckap4-201ENSMUST00000053871 PnisrA2AJT4 805 aaKnown RBP21.79■■□□□ 1.08
Ckap4-201ENSMUST00000053871 Mug2P28666 1451 aa21.78■■□□□ 1.08
Ckap4-201ENSMUST00000053871 Wdr7Q920I9 1489 aa21.78■■□□□ 1.08
Ckap4-201ENSMUST00000053871 Mapkbp1Q6NS57 1503 aa21.77■■□□□ 1.08
Ckap4-201ENSMUST00000053871 Ofd1Q80Z25 1017 aa21.77■■□□□ 1.08
Ckap4-201ENSMUST00000053871 Wdr43Q6ZQL4 677 aaKnown RBP21.76■■□□□ 1.07
Ckap4-201ENSMUST00000053871 Sart1Q9Z315 806 aaKnown RBP21.75■■□□□ 1.07
Ckap4-201ENSMUST00000053871 Lamc1P02468 1607 aaKnown RBP21.74■■□□□ 1.07
Ckap4-201ENSMUST00000053871 Cdk13Q69ZA1 1511 aaKnown RBP21.74■■□□□ 1.07
Ckap4-201ENSMUST00000053871 Arhgef12Q8R4H2 1543 aaKnown RBP21.73■■□□□ 1.07
Ckap4-201ENSMUST00000053871 Mlh3A0A1Y7VMP7 1443 aa21.73■■□□□ 1.07
Ckap4-201ENSMUST00000053871 Plekhg5Q66T02 1073 aa21.71■■□□□ 1.07
Ckap4-201ENSMUST00000053871 Erich6D3Z6S9 713 aa21.7■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Myt1Q8CFC2 1127 aa21.7■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Slc4a3P16283 1227 aa21.69■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Washc2Q6PGL7 1334 aa21.68■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Map3k4O08648 1597 aa21.68■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Trappc8E9PWG2 1437 aa21.67■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Myom3A2ABU4 1439 aa21.67■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Ifit1bl1D3Z6F0 470 aa21.66■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Supt16hQ920B9 1047 aa21.66■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Zcchc11B2RX14 1644 aaKnown RBP21.65■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Arhgap5P97393 1501 aa21.65■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Clstn2Q9ER65 966 aa21.65■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Mbd5B1AYB6 1498 aa21.65■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Caskin1Q6P9K8 1431 aa21.65■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Naip6Q9JIB6 1403 aa21.64■■□□□ 1.06
Ckap4-201ENSMUST00000053871 Kif21bQ9QXL1 1668 aa21.64■■□□□ 1.05
Ckap4-201ENSMUST00000053871 Ssh2Q5SW75 1423 aa21.63■■□□□ 1.05
Ckap4-201ENSMUST00000053871 Rusc2Q80U22 1514 aa21.62■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms