RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Rprd2Q6NXI6 1469 aaKnown RBP19.95■□□□□ 0.78
Ushbp1-201ENSMUST00000049184 Kcnh8P59111 1102 aa19.94■□□□□ 0.78
Ushbp1-201ENSMUST00000049184 L3mbtl2P59178 703 aa19.94■□□□□ 0.78
Ushbp1-201ENSMUST00000049184 Pkd2O35245 966 aa19.94■□□□□ 0.78
Ushbp1-201ENSMUST00000049184 Polr1aO35134 1717 aaKnown RBP19.94■□□□□ 0.78
Ushbp1-201ENSMUST00000049184 Npm1Q61937 292 aaKnown RBP19.92■□□□□ 0.78
Ushbp1-201ENSMUST00000049184 Mug1P28665 1476 aa19.92■□□□□ 0.78
Ushbp1-201ENSMUST00000049184 Disp1Q3TDN0 1521 aa19.91■□□□□ 0.78
Ushbp1-201ENSMUST00000049184 Arhgap27A2AB59 869 aa19.91■□□□□ 0.78
Ushbp1-201ENSMUST00000049184 Gtf3c3Q3TMP1 882 aa19.91■□□□□ 0.78
Ushbp1-201ENSMUST00000049184 Duox2A2AQ99 1517 aa19.9■□□□□ 0.78
Ushbp1-201ENSMUST00000049184 Rfx7F8VPJ6 1459 aa19.89■□□□□ 0.78
Ushbp1-201ENSMUST00000049184 LrpprcQ6PB66 1392 aaKnown RBP19.89■□□□□ 0.77
Ushbp1-201ENSMUST00000049184 Plekhg5Q66T02 1073 aa19.89■□□□□ 0.77
Ushbp1-201ENSMUST00000049184 Amer1Q7TS75 1132 aa19.89■□□□□ 0.77
Ushbp1-201ENSMUST00000049184 SynmQ70IV5 1561 aa19.89■□□□□ 0.77
Ushbp1-201ENSMUST00000049184 Cux2P70298 1426 aa19.89■□□□□ 0.77
Ushbp1-201ENSMUST00000049184 PogzQ8BZH4 1409 aaKnown RBP19.88■□□□□ 0.77
Ushbp1-201ENSMUST00000049184 Cwc22Q8C5N3 908 aaKnown RBP19.87■□□□□ 0.77
Ushbp1-201ENSMUST00000049184 Irx3P81067 507 aa19.85■□□□□ 0.77
Ushbp1-201ENSMUST00000049184 Phldb1Q6PDH0 1371 aaKnown RBP19.84■□□□□ 0.77
Ushbp1-201ENSMUST00000049184 Ift140E9PY46 1464 aa19.84■□□□□ 0.77
Ushbp1-201ENSMUST00000049184 Zfp644E9QA22 1323 aa19.83■□□□□ 0.77
Ushbp1-201ENSMUST00000049184 Iqcf3Q9D498 203 aa19.83■□□□□ 0.77
Ushbp1-201ENSMUST00000049184 Cabp1Q9JLK7 227 aa19.83■□□□□ 0.77
Ushbp1-201ENSMUST00000049184 Fam135aQ6NS59 1506 aa19.82■□□□□ 0.76
Ushbp1-201ENSMUST00000049184 Pik3c2gO70167 1506 aa19.81■□□□□ 0.76
Ushbp1-201ENSMUST00000049184 Gcc2Q8CHG3 1679 aa19.81■□□□□ 0.76
Ushbp1-201ENSMUST00000049184 NexmifQ5DTT1 1515 aa19.79■□□□□ 0.76
Ushbp1-201ENSMUST00000049184 Kif27Q7M6Z4 1394 aa19.79■□□□□ 0.76
Ushbp1-201ENSMUST00000049184 Mink1Q9JM52 1308 aa19.78■□□□□ 0.76
Ushbp1-201ENSMUST00000049184 Gpatch8A2A6A1 1505 aa19.76■□□□□ 0.75
Ushbp1-201ENSMUST00000049184 Dapk1Q80YE7 1442 aa19.76■□□□□ 0.75
Ushbp1-201ENSMUST00000049184 Kank1E9Q238 1360 aa19.76■□□□□ 0.75
Ushbp1-201ENSMUST00000049184 Myom3A2ABU4 1439 aa19.76■□□□□ 0.75
Ushbp1-201ENSMUST00000049184 Samd9lQ69Z37 1561 aa19.75■□□□□ 0.75
Ushbp1-201ENSMUST00000049184 Rad54l2Q99NG0 1466 aa19.74■□□□□ 0.75
Ushbp1-201ENSMUST00000049184 ChgaP26339 463 aaKnown RBP19.74■□□□□ 0.75
Ushbp1-201ENSMUST00000049184 Erbb3Q61526 1339 aa19.74■□□□□ 0.75
Ushbp1-201ENSMUST00000049184 Rundc1Q0VDN7 615 aa19.73■□□□□ 0.75
Ushbp1-201ENSMUST00000049184 Kif21aQ9QXL2 1672 aa19.73■□□□□ 0.75
Ushbp1-201ENSMUST00000049184 Abcc5Q9R1X5 1436 aa19.73■□□□□ 0.75
Ushbp1-201ENSMUST00000049184 BC005561E9Q5E2 1589 aa19.72■□□□□ 0.75
Ushbp1-201ENSMUST00000049184 NeflP08551 543 aa19.71■□□□□ 0.75
Ushbp1-201ENSMUST00000049184 Plcd4Q8K3R3 807 aa19.71■□□□□ 0.75
Ushbp1-201ENSMUST00000049184 Plekhh2Q8C115 1491 aa19.7■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 Rgl3Q3UYI5 709 aa19.7■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 Prkrip1Q9CWV6 186 aaKnown RBP19.7■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 Mbd5B1AYB6 1498 aa19.69■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 Naip6Q9JIB6 1403 aa19.69■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 4933416C03RikQ3V063 378 aa19.68■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 Arhgef12Q8R4H2 1543 aaKnown RBP19.68■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 CadpsQ80TJ1 1355 aa19.68■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 Card11Q8CIS0 1159 aa19.68■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 Lamc1P02468 1607 aaKnown RBP19.68■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 DaxxO35613 739 aa19.67■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 Abca5Q8K448 1642 aa19.67■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 Fgd1P52734 960 aa19.66■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 Ubl4bQ9CQ84 188 aa19.66■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 Mug2P28666 1451 aa19.64■□□□□ 0.74
Ushbp1-201ENSMUST00000049184 Anp32bQ9EST5 272 aaKnown RBP19.64■□□□□ 0.73
Ushbp1-201ENSMUST00000049184 Rock2P70336 1388 aa19.63■□□□□ 0.73
Ushbp1-201ENSMUST00000049184 Dhx9O70133 1380 aaKnown RBP19.62■□□□□ 0.73
Ushbp1-201ENSMUST00000049184 Zfp444Q3TDV8 331 aaKnown RBP19.62■□□□□ 0.73
Ushbp1-201ENSMUST00000049184 TnikP83510 1323 aa19.62■□□□□ 0.73
Ushbp1-201ENSMUST00000049184 Mtus2Q3UHD3 1353 aa19.6■□□□□ 0.73
Ushbp1-201ENSMUST00000049184 Rpgrip1lQ8CG73 1264 aa19.6■□□□□ 0.73
Ushbp1-201ENSMUST00000049184 Kif21bQ9QXL1 1668 aa19.6■□□□□ 0.73
Ushbp1-201ENSMUST00000049184 Ttll13A4Q9F6 804 aa19.6■□□□□ 0.73
Ushbp1-201ENSMUST00000049184 Kif14L0N7N1 1674 aaKnown RBP19.59■□□□□ 0.73
Ushbp1-201ENSMUST00000049184 Dhx57Q6P5D3 1388 aaKnown RBP19.58■□□□□ 0.73
Ushbp1-201ENSMUST00000049184 Mak16Q8BGS0 296 aaKnown RBP19.58■□□□□ 0.72
Ushbp1-201ENSMUST00000049184 Zscan21Q07231 555 aa19.57■□□□□ 0.72
Ushbp1-201ENSMUST00000049184 Arhgef40Q3UPH7 1517 aa19.57■□□□□ 0.72
Ushbp1-201ENSMUST00000049184 SphkapQ6NSW3 1687 aa19.57■□□□□ 0.72
Ushbp1-201ENSMUST00000049184 Pla2r1Q62028 1487 aa19.57■□□□□ 0.72
Ushbp1-201ENSMUST00000049184 Il16O54824 1322 aa19.57■□□□□ 0.72
Ushbp1-201ENSMUST00000049184 Nkx1-2P42580 305 aa19.56■□□□□ 0.72
Ushbp1-201ENSMUST00000049184 AlkP97793 1621 aa19.56■□□□□ 0.72
Ushbp1-201ENSMUST00000049184 Map3k4O08648 1597 aa19.56■□□□□ 0.72
Ushbp1-201ENSMUST00000049184 Kdm3bQ6ZPY7 1562 aa19.55■□□□□ 0.72
Ushbp1-201ENSMUST00000049184 CanxP35564 591 aaKnown RBP19.55■□□□□ 0.72
Ushbp1-201ENSMUST00000049184 Grwd1Q810D6 446 aaKnown RBP19.53■□□□□ 0.72
Ushbp1-201ENSMUST00000049184 Kdm6bQ5NCY0 1641 aa19.52■□□□□ 0.72
Ushbp1-201ENSMUST00000049184 Ttll5Q8CHB8 1328 aa19.52■□□□□ 0.72
Ushbp1-201ENSMUST00000049184 Dnajc5bQ9CQ94 199 aa19.52■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 Ncoa3O09000 1398 aa19.52■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 Adgrb2Q8CGM1 1561 aa19.51■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 Rad21Q61550 635 aaKnown RBP19.51■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 Trak1Q6PD31 939 aa19.51■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 RalgapbQ8BQZ4 1484 aa19.51■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 Ipo4Q8VI75 1082 aa19.51■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 Cdk13Q69ZA1 1511 aaKnown RBP19.5■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 B4galnt3Q6L8S8 986 aa19.48■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 Q7TT23 1179 aa19.48■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 Sart3Q9JLI8 962 aaKnown RBP19.48■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 DroshaQ5HZJ0 1373 aaKnown RBP19.48■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 Mbd3Q9Z2D8 285 aaKnown RBP19.47■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 Wdr7Q920I9 1489 aa19.47■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 Soga1E1U8D0 1418 aa19.47■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms