RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Ccdc141E9Q8Q6 1531 aa30.43■■■□□ 2.46
Ccdc9-201ENSMUST00000041010 Arhgap31A6X8Z5 1425 aa30.43■■■□□ 2.46
Ccdc9-201ENSMUST00000041010 Cdc42bpaQ3UU96 1719 aa30.43■■■□□ 2.46
Ccdc9-201ENSMUST00000041010 Arhgef12Q8R4H2 1543 aaKnown RBP30.42■■■□□ 2.46
Ccdc9-201ENSMUST00000041010 Ncoa3O09000 1398 aa30.39■■■□□ 2.46
Ccdc9-201ENSMUST00000041010 Kiaa1551Q5DTW7 1521 aa30.38■■■□□ 2.45
Ccdc9-201ENSMUST00000041010 AknaQ80VW7 1404 aa30.36■■■□□ 2.45
Ccdc9-201ENSMUST00000041010 Dhx57Q6P5D3 1388 aaKnown RBP30.36■■■□□ 2.45
Ccdc9-201ENSMUST00000041010 Mroh2aD3Z750 1679 aa30.35■■■□□ 2.45
Ccdc9-201ENSMUST00000041010 Supt16hQ920B9 1047 aa30.33■■■□□ 2.45
Ccdc9-201ENSMUST00000041010 Mia2Q91ZV0 1396 aa30.33■■■□□ 2.45
Ccdc9-201ENSMUST00000041010 Magi1Q6RHR9 1471 aa30.32■■■□□ 2.44
Ccdc9-201ENSMUST00000041010 Jph4Q80WT0 628 aa30.32■■■□□ 2.44
Ccdc9-201ENSMUST00000041010 A2mQ6GQT1 1474 aa30.3■■■□□ 2.44
Ccdc9-201ENSMUST00000041010 Fhad1A6PWD2 1420 aa30.29■■■□□ 2.44
Ccdc9-201ENSMUST00000041010 UacaQ8CGB3 1411 aa30.29■■■□□ 2.44
Ccdc9-201ENSMUST00000041010 Naip2Q9QUK4 1447 aa30.29■■■□□ 2.44
Ccdc9-201ENSMUST00000041010 Chd1P40201 1711 aa30.29■■■□□ 2.44
Ccdc9-201ENSMUST00000041010 Mapkbp1Q6NS57 1503 aa30.27■■■□□ 2.44
Ccdc9-201ENSMUST00000041010 Gm14025A2AP89 1413 aa30.26■■■□□ 2.43
Ccdc9-201ENSMUST00000041010 Abcc1O35379 1528 aa30.25■■■□□ 2.43
Ccdc9-201ENSMUST00000041010 Fam163aQ8CAA5 168 aa30.25■■■□□ 2.43
Ccdc9-201ENSMUST00000041010 Vps8Q0P5W1 1427 aa30.23■■■□□ 2.43
Ccdc9-201ENSMUST00000041010 NclP09405 707 aaKnown RBP30.22■■■□□ 2.43
Ccdc9-201ENSMUST00000041010 Gm13697A2AK42 830 aa30.18■■■□□ 2.42
Ccdc9-201ENSMUST00000041010 Fam50aQ9WV03 339 aaKnown RBP30.17■■■□□ 2.42
Ccdc9-201ENSMUST00000041010 Prex2Q3LAC4 1598 aa30.16■■■□□ 2.42
Ccdc9-201ENSMUST00000041010 Adcy10Q8C0T9 1614 aa30.16■■■□□ 2.42
Ccdc9-201ENSMUST00000041010 Washc2Q6PGL7 1334 aa30.16■■■□□ 2.42
Ccdc9-201ENSMUST00000041010 Fancd2Q80V62 1450 aa30.15■■■□□ 2.42
Ccdc9-201ENSMUST00000041010 Kiaa1210E9Q0C6 1637 aa30.13■■■□□ 2.41
Ccdc9-201ENSMUST00000041010 Cul7Q8VE73 1689 aa30.12■■■□□ 2.41
Ccdc9-201ENSMUST00000041010 Arhgef40Q3UPH7 1517 aa30.1■■■□□ 2.41
Ccdc9-201ENSMUST00000041010 Rfx7F8VPJ6 1459 aa30.1■■■□□ 2.41
Ccdc9-201ENSMUST00000041010 Ccer2J3QPU5 274 aa30.08■■■□□ 2.41
Ccdc9-201ENSMUST00000041010 Fam208aQ69ZR9 1610 aaKnown RBP30.07■■■□□ 2.41
Ccdc9-201ENSMUST00000041010 Mlh3A0A1Y7VMP7 1443 aa30.06■■■□□ 2.4
Ccdc9-201ENSMUST00000041010 NhsB1AV60 1647 aa30.05■■■□□ 2.4
Ccdc9-201ENSMUST00000041010 Wdr7Q920I9 1489 aa30.05■■■□□ 2.4
Ccdc9-201ENSMUST00000041010 Plekhh2Q8C115 1491 aa30.05■■■□□ 2.4
Ccdc9-201ENSMUST00000041010 Caskin1Q6P9K8 1431 aa30.03■■■□□ 2.4
Ccdc9-201ENSMUST00000041010 Smg6P61406 1418 aaKnown RBP30.03■■■□□ 2.4
Ccdc9-201ENSMUST00000041010 Wdr43Q6ZQL4 677 aaKnown RBP30.03■■■□□ 2.4
Ccdc9-201ENSMUST00000041010 Abcc5Q9R1X5 1436 aa30.03■■■□□ 2.4
Ccdc9-201ENSMUST00000041010 Kdm6bQ5NCY0 1641 aa30.02■■■□□ 2.4
Ccdc9-201ENSMUST00000041010 Ankrd36D3Z4K0 1415 aa30.01■■■□□ 2.39
Ccdc9-201ENSMUST00000041010 Fhod3Q76LL6 1578 aa30■■■□□ 2.39
Ccdc9-201ENSMUST00000041010 Ppp4r2Q0VGB7 417 aa29.99■■■□□ 2.39
Ccdc9-201ENSMUST00000041010 Camsap2Q8C1B1 1461 aa29.99■■■□□ 2.39
Ccdc9-201ENSMUST00000041010 Dennd4bQ3U1Y4 1499 aa29.94■■■□□ 2.38
Ccdc9-201ENSMUST00000041010 Rnf17Q99MV7 1640 aa29.94■■■□□ 2.38
Ccdc9-201ENSMUST00000041010 Mtus2Q3UHD3 1353 aa29.92■■■□□ 2.38
Ccdc9-201ENSMUST00000041010 Il16O54824 1322 aa29.91■■■□□ 2.38
Ccdc9-201ENSMUST00000041010 Fkbp15Q6P9Q6 1216 aaKnown RBP29.9■■■□□ 2.38
Ccdc9-201ENSMUST00000041010 Kdm3bQ6ZPY7 1562 aa29.87■■■□□ 2.37
Ccdc9-201ENSMUST00000041010 Abca8bQ8K440 1620 aa29.87■■■□□ 2.37
Ccdc9-201ENSMUST00000041010 Chic2Q9D9G3 165 aa29.86■■■□□ 2.37
Ccdc9-201ENSMUST00000041010 Hdac5Q9Z2V6 1113 aa29.86■■■□□ 2.37
Ccdc9-201ENSMUST00000041010 Ythdc2B2RR83 1445 aaKnown RBP29.85■■■□□ 2.37
Ccdc9-201ENSMUST00000041010 Igf1rQ60751 1373 aa29.84■■■□□ 2.37
Ccdc9-201ENSMUST00000041010 Pdcd11Q6NS46 1862 aaKnown RBP29.84■■■□□ 2.37
Ccdc9-201ENSMUST00000041010 Hspa5P20029 655 aaKnown RBP29.84■■■□□ 2.37
Ccdc9-201ENSMUST00000041010 Cabp1Q9JLK7 227 aa29.83■■■□□ 2.37
Ccdc9-201ENSMUST00000041010 SphkapQ6NSW3 1687 aa29.83■■■□□ 2.37
Ccdc9-201ENSMUST00000041010 Gapvd1Q6PAR5 1458 aa29.82■■■□□ 2.36
Ccdc9-201ENSMUST00000041010 Tdrd9Q14BI7 1383 aa29.79■■■□□ 2.36
Ccdc9-201ENSMUST00000041010 Gm32742A0A1B0GT42 1604 aa29.79■■■□□ 2.36
Ccdc9-201ENSMUST00000041010 Cfap74Q3UY96 1578 aa29.79■■■□□ 2.36
Ccdc9-201ENSMUST00000041010 Liat1Q810M6 228 aa29.78■■■□□ 2.36
Ccdc9-201ENSMUST00000041010 Upf2A2AT37 1269 aaKnown RBP29.77■■■□□ 2.36
Ccdc9-201ENSMUST00000041010 Ccdc27Q3V036 639 aa29.77■■■□□ 2.36
Ccdc9-201ENSMUST00000041010 Pabpn1Q8CCS6 302 aaKnown RBP29.77■■■□□ 2.36
Ccdc9-201ENSMUST00000041010 Pak3Q61036 559 aa29.76■■■□□ 2.36
Ccdc9-201ENSMUST00000041010 Atp10dQ8K2X1 1416 aa29.75■■■□□ 2.35
Ccdc9-201ENSMUST00000041010 Slc24a1Q91WD8 1130 aa29.75■■■□□ 2.35
Ccdc9-201ENSMUST00000041010 Arhgap5P97393 1501 aa29.75■■■□□ 2.35
Ccdc9-201ENSMUST00000041010 Amer1Q7TS75 1132 aa29.74■■■□□ 2.35
Ccdc9-201ENSMUST00000041010 PtprtQ99M80 1454 aa29.74■■■□□ 2.35
Ccdc9-201ENSMUST00000041010 Fmn2Q9JL04 1578 aa29.73■■■□□ 2.35
Ccdc9-201ENSMUST00000041010 Setbp1Q9Z180 1582 aa29.71■■■□□ 2.35
Ccdc9-201ENSMUST00000041010 AI481877A2ALV5 1481 aa29.7■■■□□ 2.35
Ccdc9-201ENSMUST00000041010 Neurl4Q5NCX5 1563 aa29.7■■■□□ 2.34
Ccdc9-201ENSMUST00000041010 Cep170Q6A065 1588 aa29.7■■■□□ 2.34
Ccdc9-201ENSMUST00000041010 Hecw1Q8K4P8 1604 aa29.69■■■□□ 2.34
Ccdc9-201ENSMUST00000041010 Egfem1Q8C088 590 aa29.69■■■□□ 2.34
Ccdc9-201ENSMUST00000041010 Lamc1P02468 1607 aaKnown RBP29.69■■■□□ 2.34
Ccdc9-201ENSMUST00000041010 Adgrb2Q8CGM1 1561 aa29.69■■■□□ 2.34
Ccdc9-201ENSMUST00000041010 Mast1Q9R1L5 1570 aa29.68■■■□□ 2.34
Ccdc9-201ENSMUST00000041010 Ccdc9Q8VC31 543 aaKnown RBP29.65■■■□□ 2.34
Ccdc9-201ENSMUST00000041010 Lrrc9Q8CDN9 1456 aa29.65■■■□□ 2.34
Ccdc9-201ENSMUST00000041010 Kif21bQ9QXL1 1668 aa29.64■■■□□ 2.34
Ccdc9-201ENSMUST00000041010 Naip5Q9R016 1403 aa29.64■■■□□ 2.34
Ccdc9-201ENSMUST00000041010 Eif5bQ05D44 1216 aaKnown RBP29.64■■■□□ 2.34
Ccdc9-201ENSMUST00000041010 Sin3aQ60520 1274 aaKnown RBP29.64■■■□□ 2.34
Ccdc9-201ENSMUST00000041010 Abcc3B2RX12 1523 aa29.63■■■□□ 2.33
Ccdc9-201ENSMUST00000041010 Adgrl2Q8JZZ7 1487 aa29.63■■■□□ 2.33
Ccdc9-201ENSMUST00000041010 AlkP97793 1621 aa29.62■■■□□ 2.33
Ccdc9-201ENSMUST00000041010 Ube2uB1AUC4 352 aa29.6■■■□□ 2.33
Ccdc9-201ENSMUST00000041010 Znf608Q56A10 1511 aa29.58■■■□□ 2.33
Ccdc9-201ENSMUST00000041010 Pprc1Q6NZN1 1644 aa29.58■■■□□ 2.33
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms