RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Polr1aO35134 1717 aaKnown RBP26.39■■□□□ 1.82
Tram1-201ENSMUST00000027068 Kif27Q7M6Z4 1394 aa26.39■■□□□ 1.82
Tram1-201ENSMUST00000027068 Lmtk2Q3TYD6 1471 aa26.36■■□□□ 1.81
Tram1-201ENSMUST00000027068 Liat1Q810M6 228 aa26.35■■□□□ 1.81
Tram1-201ENSMUST00000027068 Gpatch8A2A6A1 1505 aa26.34■■□□□ 1.81
Tram1-201ENSMUST00000027068 NexmifQ5DTT1 1515 aa26.32■■□□□ 1.8
Tram1-201ENSMUST00000027068 Fhod3Q76LL6 1578 aa26.31■■□□□ 1.8
Tram1-201ENSMUST00000027068 EprsQ8CGC7 1512 aaKnown RBP26.31■■□□□ 1.8
Tram1-201ENSMUST00000027068 Mug1P28665 1476 aa26.3■■□□□ 1.8
Tram1-201ENSMUST00000027068 PnisrA2AJT4 805 aaKnown RBP26.28■■□□□ 1.8
Tram1-201ENSMUST00000027068 BC005561E9Q5E2 1589 aa26.27■■□□□ 1.8
Tram1-201ENSMUST00000027068 CadpsQ80TJ1 1355 aa26.27■■□□□ 1.8
Tram1-201ENSMUST00000027068 Ift140E9PY46 1464 aa26.24■■□□□ 1.79
Tram1-201ENSMUST00000027068 Rprd2Q6NXI6 1469 aaKnown RBP26.24■■□□□ 1.79
Tram1-201ENSMUST00000027068 Kcnh8P59111 1102 aa26.23■■□□□ 1.79
Tram1-201ENSMUST00000027068 Rgl3Q3UYI5 709 aa26.22■■□□□ 1.79
Tram1-201ENSMUST00000027068 Ofd1Q80Z25 1017 aa26.21■■□□□ 1.79
Tram1-201ENSMUST00000027068 Setbp1Q9Z180 1582 aa26.21■■□□□ 1.79
Tram1-201ENSMUST00000027068 Egfem1Q8C088 590 aa26.21■■□□□ 1.79
Tram1-201ENSMUST00000027068 Abcc5Q9R1X5 1436 aa26.18■■□□□ 1.78
Tram1-201ENSMUST00000027068 Pla2r1Q62028 1487 aa26.18■■□□□ 1.78
Tram1-201ENSMUST00000027068 Gcc2Q8CHG3 1679 aa26.16■■□□□ 1.78
Tram1-201ENSMUST00000027068 Rfx7F8VPJ6 1459 aa26.14■■□□□ 1.78
Tram1-201ENSMUST00000027068 L3mbtl2P59178 703 aa26.12■■□□□ 1.77
Tram1-201ENSMUST00000027068 Rundc1Q0VDN7 615 aa26.11■■□□□ 1.77
Tram1-201ENSMUST00000027068 Abca5Q8K448 1642 aa26.11■■□□□ 1.77
Tram1-201ENSMUST00000027068 Plekhh2Q8C115 1491 aa26.11■■□□□ 1.77
Tram1-201ENSMUST00000027068 Dhx9O70133 1380 aaKnown RBP26.1■■□□□ 1.77
Tram1-201ENSMUST00000027068 Arhgef40Q3UPH7 1517 aa26.08■■□□□ 1.76
Tram1-201ENSMUST00000027068 Dapk1Q80YE7 1442 aa26.06■■□□□ 1.76
Tram1-201ENSMUST00000027068 Mtus2Q3UHD3 1353 aa26.05■■□□□ 1.76
Tram1-201ENSMUST00000027068 Arhgap27A2AB59 869 aa26.05■■□□□ 1.76
Tram1-201ENSMUST00000027068 Grwd1Q810D6 446 aaKnown RBP26.05■■□□□ 1.76
Tram1-201ENSMUST00000027068 Fgd1P52734 960 aa26.05■■□□□ 1.76
Tram1-201ENSMUST00000027068 Pknox2Q8BG99 474 aa26.05■■□□□ 1.76
Tram1-201ENSMUST00000027068 Pik3c2gO70167 1506 aa26.04■■□□□ 1.76
Tram1-201ENSMUST00000027068 Disp1Q3TDN0 1521 aa26.04■■□□□ 1.76
Tram1-201ENSMUST00000027068 Ncoa3O09000 1398 aa26.04■■□□□ 1.76
Tram1-201ENSMUST00000027068 Cwc22Q8C5N3 908 aaKnown RBP26.03■■□□□ 1.76
Tram1-201ENSMUST00000027068 WizO88286 1684 aaKnown RBP26.03■■□□□ 1.76
Tram1-201ENSMUST00000027068 Kdm6bQ5NCY0 1641 aa26.03■■□□□ 1.76
Tram1-201ENSMUST00000027068 Card11Q8CIS0 1159 aa26.02■■□□□ 1.76
Tram1-201ENSMUST00000027068 Plcd4Q8K3R3 807 aa26.02■■□□□ 1.76
Tram1-201ENSMUST00000027068 Magi3Q9EQJ9 1476 aa26.02■■□□□ 1.76
Tram1-201ENSMUST00000027068 Plekhg5Q66T02 1073 aa26.01■■□□□ 1.76
Tram1-201ENSMUST00000027068 SphkapQ6NSW3 1687 aa26■■□□□ 1.75
Tram1-201ENSMUST00000027068 WrnO09053 1401 aa26■■□□□ 1.75
Tram1-201ENSMUST00000027068 Trak1Q6PD31 939 aa26■■□□□ 1.75
Tram1-201ENSMUST00000027068 Zbtb4Q5F293 982 aa25.98■■□□□ 1.75
Tram1-201ENSMUST00000027068 Adgrb2Q8CGM1 1561 aa25.97■■□□□ 1.75
Tram1-201ENSMUST00000027068 Grin2aP35436 1464 aa25.96■■□□□ 1.75
Tram1-201ENSMUST00000027068 Ttll5Q8CHB8 1328 aa25.96■■□□□ 1.75
Tram1-201ENSMUST00000027068 Kif21aQ9QXL2 1672 aa25.95■■□□□ 1.74
Tram1-201ENSMUST00000027068 PxdnQ3UQ28 1475 aa25.95■■□□□ 1.74
Tram1-201ENSMUST00000027068 Dhx57Q6P5D3 1388 aaKnown RBP25.94■■□□□ 1.74
Tram1-201ENSMUST00000027068 Gtf3c3Q3TMP1 882 aa25.94■■□□□ 1.74
Tram1-201ENSMUST00000027068 Tcerg1Q8CGF7 1100 aaKnown RBP25.94■■□□□ 1.74
Tram1-201ENSMUST00000027068 Kif14L0N7N1 1674 aaKnown RBP25.93■■□□□ 1.74
Tram1-201ENSMUST00000027068 Soga1E1U8D0 1418 aa25.92■■□□□ 1.74
Tram1-201ENSMUST00000027068 AlkP97793 1621 aa25.91■■□□□ 1.74
Tram1-201ENSMUST00000027068 Ccdc27Q3V036 639 aa25.91■■□□□ 1.74
Tram1-201ENSMUST00000027068 Ipo9Q91YE6 1041 aa25.91■■□□□ 1.74
Tram1-201ENSMUST00000027068 Myom3A2ABU4 1439 aa25.9■■□□□ 1.74
Tram1-201ENSMUST00000027068 Mug2P28666 1451 aa25.9■■□□□ 1.74
Tram1-201ENSMUST00000027068 Fam135aQ6NS59 1506 aa25.88■■□□□ 1.73
Tram1-201ENSMUST00000027068 Zbtb7cQ8VCZ7 619 aa25.87■■□□□ 1.73
Tram1-201ENSMUST00000027068 Kdm3bQ6ZPY7 1562 aa25.87■■□□□ 1.73
Tram1-201ENSMUST00000027068 Erbb3Q61526 1339 aa25.86■■□□□ 1.73
Tram1-201ENSMUST00000027068 Rpgrip1lQ8CG73 1264 aa25.85■■□□□ 1.73
Tram1-201ENSMUST00000027068 Il16O54824 1322 aa25.84■■□□□ 1.73
Tram1-201ENSMUST00000027068 Adamts12Q811B3 1600 aa25.84■■□□□ 1.73
Tram1-201ENSMUST00000027068 Naip6Q9JIB6 1403 aa25.84■■□□□ 1.73
Tram1-201ENSMUST00000027068 Upf2A2AT37 1269 aaKnown RBP25.84■■□□□ 1.73
Tram1-201ENSMUST00000027068 Mbd5B1AYB6 1498 aa25.83■■□□□ 1.73
Tram1-201ENSMUST00000027068 Adcy10Q8C0T9 1614 aa25.83■■□□□ 1.73
Tram1-201ENSMUST00000027068 Rad21Q61550 635 aaKnown RBP25.83■■□□□ 1.73
Tram1-201ENSMUST00000027068 Plb1Q3TTY0 1478 aa25.83■■□□□ 1.72
Tram1-201ENSMUST00000027068 Lamc1P02468 1607 aaKnown RBP25.82■■□□□ 1.72
Tram1-201ENSMUST00000027068 Cdk13Q69ZA1 1511 aaKnown RBP25.81■■□□□ 1.72
Tram1-201ENSMUST00000027068 Supt6hQ62383 1726 aaKnown RBP25.8■■□□□ 1.72
Tram1-201ENSMUST00000027068 Cc2d2bA0A286YDU8 1405 aa25.78■■□□□ 1.72
Tram1-201ENSMUST00000027068 Zfp444Q3TDV8 331 aaKnown RBP25.77■■□□□ 1.72
Tram1-201ENSMUST00000027068 Q7TT23 1179 aa25.77■■□□□ 1.72
Tram1-201ENSMUST00000027068 Rapgef6Q5NCJ1 1609 aa25.76■■□□□ 1.71
Tram1-201ENSMUST00000027068 Wdr7Q920I9 1489 aa25.76■■□□□ 1.71
Tram1-201ENSMUST00000027068 Arhgef12Q8R4H2 1543 aaKnown RBP25.75■■□□□ 1.71
Tram1-201ENSMUST00000027068 ChgaP26339 463 aaKnown RBP25.75■■□□□ 1.71
Tram1-201ENSMUST00000027068 Nup155Q99P88 1391 aaKnown RBP25.75■■□□□ 1.71
Tram1-201ENSMUST00000027068 Map3k4O08648 1597 aa25.74■■□□□ 1.71
Tram1-201ENSMUST00000027068 Kif21bQ9QXL1 1668 aa25.73■■□□□ 1.71
Tram1-201ENSMUST00000027068 Kank1E9Q238 1360 aa25.71■■□□□ 1.71
Tram1-201ENSMUST00000027068 Tdrd9Q14BI7 1383 aa25.71■■□□□ 1.71
Tram1-201ENSMUST00000027068 Map4P27546 1125 aaKnown RBP25.71■■□□□ 1.71
Tram1-201ENSMUST00000027068 NeflP08551 543 aa25.7■■□□□ 1.71
Tram1-201ENSMUST00000027068 Zscan21Q07231 555 aa25.69■■□□□ 1.7
Tram1-201ENSMUST00000027068 Arhgef11Q68FM7 1552 aa25.68■■□□□ 1.7
Tram1-201ENSMUST00000027068 Abca16E9PWJ7 1678 aa25.68■■□□□ 1.7
Tram1-201ENSMUST00000027068 Cdc42bpaQ3UU96 1719 aa25.67■■□□□ 1.7
Tram1-201ENSMUST00000027068 Fkbp15Q6P9Q6 1216 aaKnown RBP25.67■■□□□ 1.7
Tram1-201ENSMUST00000027068 Mak16Q8BGS0 296 aaKnown RBP25.66■■□□□ 1.7
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms