RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Ncoa3O09000 1398 aa15.59■□□□□ 0.09
Ldb3-202ENSMUST00000022328 Rapgef6Q5NCJ1 1609 aa15.59■□□□□ 0.09
Ldb3-202ENSMUST00000022328 Abcc2Q8VI47 1543 aa15.57■□□□□ 0.08
Ldb3-202ENSMUST00000022328 Shroom2A2ALU4 1481 aa15.56■□□□□ 0.08
Ldb3-202ENSMUST00000022328 Ppp4r2Q0VGB7 417 aa15.56■□□□□ 0.08
Ldb3-202ENSMUST00000022328 Gm13697A2AK42 830 aa15.56■□□□□ 0.08
Ldb3-202ENSMUST00000022328 Lrriq1Q0P5X1 1673 aa15.56■□□□□ 0.08
Ldb3-202ENSMUST00000022328 Ncoa2Q61026 1462 aa15.55■□□□□ 0.08
Ldb3-202ENSMUST00000022328 Naip5Q9R016 1403 aa15.55■□□□□ 0.08
Ldb3-202ENSMUST00000022328 Arhgap27A2AB59 869 aa15.54■□□□□ 0.08
Ldb3-202ENSMUST00000022328 Abcc5Q9R1X5 1436 aa15.54■□□□□ 0.08
Ldb3-202ENSMUST00000022328 Setbp1Q9Z180 1582 aa15.53■□□□□ 0.08
Ldb3-202ENSMUST00000022328 Arhgef11Q68FM7 1552 aa15.53■□□□□ 0.08
Ldb3-202ENSMUST00000022328 Cabp1Q9JLK7 227 aa15.51■□□□□ 0.07
Ldb3-202ENSMUST00000022328 Plekhh2Q8C115 1491 aa15.51■□□□□ 0.07
Ldb3-202ENSMUST00000022328 Arhgef40Q3UPH7 1517 aa15.51■□□□□ 0.07
Ldb3-202ENSMUST00000022328 Kiaa1551Q5DTW7 1521 aa15.51■□□□□ 0.07
Ldb3-202ENSMUST00000022328 Mphosph9A6H5Y1 991 aa15.5■□□□□ 0.07
Ldb3-202ENSMUST00000022328 Cdc42bpaQ3UU96 1719 aa15.49■□□□□ 0.07
Ldb3-202ENSMUST00000022328 Arhgap31A6X8Z5 1425 aa15.46■□□□□ 0.07
Ldb3-202ENSMUST00000022328 Dhx57Q6P5D3 1388 aaKnown RBP15.46■□□□□ 0.07
Ldb3-202ENSMUST00000022328 Il16O54824 1322 aa15.46■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Kdm6bQ5NCY0 1641 aa15.45■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Adcy10Q8C0T9 1614 aa15.45■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Mtus2Q3UHD3 1353 aa15.44■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Map3k4O08648 1597 aa15.43■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Fam163aQ8CAA5 168 aa15.43■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Tnnt3Q9QZ47 272 aa15.43■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Rusc2Q80U22 1514 aa15.43■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Magi1Q6RHR9 1471 aa15.43■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Mapkbp1Q6NS57 1503 aa15.43■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Kdm3bQ6ZPY7 1562 aa15.42■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Hs6st3Q9QYK4 470 aa15.42■□□□□ 0.06
Ldb3-202ENSMUST00000022328 SphkapQ6NSW3 1687 aa15.41■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Ccdc141E9Q8Q6 1531 aa15.41■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Hnrnpul2Q00PI9 745 aaKnown RBP15.4■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Pde4cQ3UEI1 686 aa15.4■□□□□ 0.06
Ldb3-202ENSMUST00000022328 Lamc1P02468 1607 aaKnown RBP15.39■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Rprd2Q6NXI6 1469 aaKnown RBP15.39■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Mroh2aD3Z750 1679 aa15.39■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Zfp644E9QA22 1323 aa15.39■□□□□ 0.05
Ldb3-202ENSMUST00000022328 SafbD3YXK2 937 aaKnown RBP15.38■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Pkd2O35245 966 aa15.38■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Dnmt1P13864 1620 aaKnown RBP15.38■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Mlh3A0A1Y7VMP7 1443 aa15.36■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Usp47Q8BY87 1376 aa15.36■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Chrna2Q91X60 512 aa15.36■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Zcchc11B2RX14 1644 aaKnown RBP15.36■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Nlrp6Q91WS2 869 aa15.36■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Adgrb2Q8CGM1 1561 aa15.35■□□□□ 0.05
Ldb3-202ENSMUST00000022328 AlkP97793 1621 aa15.35■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Prex2Q3LAC4 1598 aa15.35■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Kif21bQ9QXL1 1668 aa15.34■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Pik3c2gO70167 1506 aa15.34■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Sin3aQ60520 1274 aaKnown RBP15.34■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Pprc1Q6NZN1 1644 aa15.34■□□□□ 0.05
Ldb3-202ENSMUST00000022328 Caskin1Q6P9K8 1431 aa15.34■□□□□ 0.05
Ldb3-202ENSMUST00000022328 AcrbpQ3V140 540 aa15.33■□□□□ 0.04
Ldb3-202ENSMUST00000022328 Eif4g3Q80XI3 1579 aaKnown RBP15.33■□□□□ 0.04
Ldb3-202ENSMUST00000022328 Jph4Q80WT0 628 aa15.32■□□□□ 0.04
Ldb3-202ENSMUST00000022328 Neo1P97798 1493 aa15.31■□□□□ 0.04
Ldb3-202ENSMUST00000022328 Arhgef12Q8R4H2 1543 aaKnown RBP15.31■□□□□ 0.04
Ldb3-202ENSMUST00000022328 Stra8P70278 393 aa15.31■□□□□ 0.04
Ldb3-202ENSMUST00000022328 Rrbp1Q99PL5 1605 aaKnown RBP15.3■□□□□ 0.04
Ldb3-202ENSMUST00000022328 Tdrd9Q14BI7 1383 aa15.29■□□□□ 0.04
Ldb3-202ENSMUST00000022328 Smg6P61406 1418 aaKnown RBP15.28■□□□□ 0.04
Ldb3-202ENSMUST00000022328 Fancd2Q80V62 1450 aa15.27■□□□□ 0.03
Ldb3-202ENSMUST00000022328 Trpm2Q91YD4 1506 aa15.26■□□□□ 0.03
Ldb3-202ENSMUST00000022328 Fgd6Q69ZL1 1399 aa15.26■□□□□ 0.03
Ldb3-202ENSMUST00000022328 Ncoa1P70365 1447 aa15.26■□□□□ 0.03
Ldb3-202ENSMUST00000022328 Fam208aQ69ZR9 1610 aaKnown RBP15.25■□□□□ 0.03
Ldb3-202ENSMUST00000022328 Ttll5Q8CHB8 1328 aa15.24■□□□□ 0.03
Ldb3-202ENSMUST00000022328 Znf710Q3U288 666 aa15.23■□□□□ 0.03
Ldb3-202ENSMUST00000022328 Anp32aO35381 247 aa15.23■□□□□ 0.03
Ldb3-202ENSMUST00000022328 Cdca7Q9D0M2 382 aa15.23■□□□□ 0.03
Ldb3-202ENSMUST00000022328 DroshaQ5HZJ0 1373 aaKnown RBP15.22■□□□□ 0.03
Ldb3-202ENSMUST00000022328 AknaQ80VW7 1404 aa15.22■□□□□ 0.03
Ldb3-202ENSMUST00000022328 Dhx9O70133 1380 aaKnown RBP15.22■□□□□ 0.03
Ldb3-202ENSMUST00000022328 Fmn2Q9JL04 1578 aa15.22■□□□□ 0.03
Ldb3-202ENSMUST00000022328 Supt6hQ62383 1726 aaKnown RBP15.21■□□□□ 0.03
Ldb3-202ENSMUST00000022328 Nup155Q99P88 1391 aaKnown RBP15.21■□□□□ 0.03
Ldb3-202ENSMUST00000022328 Mbd5B1AYB6 1498 aa15.2■□□□□ 0.02
Ldb3-202ENSMUST00000022328 Fkbp15Q6P9Q6 1216 aaKnown RBP15.2■□□□□ 0.02
Ldb3-202ENSMUST00000022328 Adgrl2Q8JZZ7 1487 aa15.19■□□□□ 0.02
Ldb3-202ENSMUST00000022328 Rsph4aQ8BYM7 716 aa15.19■□□□□ 0.02
Ldb3-202ENSMUST00000022328 Kif14L0N7N1 1674 aaKnown RBP15.18■□□□□ 0.02
Ldb3-202ENSMUST00000022328 Trak1Q6PD31 939 aa15.18■□□□□ 0.02
Ldb3-202ENSMUST00000022328 Rtl5Q5DTT4 599 aa15.17■□□□□ 0.02
Ldb3-202ENSMUST00000022328 Znf219Q6IQX8 726 aa15.17■□□□□ 0.02
Ldb3-202ENSMUST00000022328 Gm14025A2AP89 1413 aa15.16■□□□□ 0.02
Ldb3-202ENSMUST00000022328 Wdr7Q920I9 1489 aa15.16■□□□□ 0.02
Ldb3-202ENSMUST00000022328 PrkcshO08795 521 aa15.16■□□□□ 0.02
Ldb3-202ENSMUST00000022328 Ifnlr1Q8CGK5 535 aa15.16■□□□□ 0.02
Ldb3-202ENSMUST00000022328 Gm32742A0A1B0GT42 1604 aa15.15■□□□□ 0.02
Ldb3-202ENSMUST00000022328 Rnf17Q99MV7 1640 aa15.14■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Map4P27546 1125 aaKnown RBP15.14■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Lrrc9Q8CDN9 1456 aa15.14■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Rgl3Q3UYI5 709 aa15.14■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Tshz2Q68FE9 1030 aa15.14■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Neurl4Q5NCX5 1563 aa15.13■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms