RNA–Protein interactions for RNA: ENSMUST00000021046.5

Ddx42-201, Transcript of ATP-dependent RNA helicase DDX42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx42, Length 4,011 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42-201ENSMUST00000021046 CntlnA2AM05 1397 aa17.63■□□□□ 0.41
Ddx42-201ENSMUST00000021046 Pdia4P08003 638 aaKnown RBP17.62■□□□□ 0.41
Ddx42-201ENSMUST00000021046 Baz1bQ9Z277 1479 aa17.61■□□□□ 0.41
Ddx42-201ENSMUST00000021046 Rangap1P46061 589 aaKnown RBP17.61■□□□□ 0.41
Ddx42-201ENSMUST00000021046 Tpm2P58774 284 aa17.61■□□□□ 0.41
Ddx42-201ENSMUST00000021046 Mia2Q91ZV0 1396 aa17.61■□□□□ 0.41
Ddx42-201ENSMUST00000021046 Cep162Q6ZQ06 1403 aa17.6■□□□□ 0.41
Ddx42-201ENSMUST00000021046 Ak7Q9D2H2 614 aa17.59■□□□□ 0.41
Ddx42-201ENSMUST00000021046 Prdm10Q3UTQ7 1184 aa17.57■□□□□ 0.4
Ddx42-201ENSMUST00000021046 L3mbtl2P59178 703 aa17.56■□□□□ 0.4
Ddx42-201ENSMUST00000021046 Plcd3Q8K2J0 785 aa17.56■□□□□ 0.4
Ddx42-201ENSMUST00000021046 Prkrip1Q9CWV6 186 aaKnown RBP17.56■□□□□ 0.4
Ddx42-201ENSMUST00000021046 Rwdd1Q9CQK7 243 aa17.55■□□□□ 0.4
Ddx42-201ENSMUST00000021046 Kif20aP97329 887 aa17.55■□□□□ 0.4
Ddx42-201ENSMUST00000021046 Mbd3Q9Z2D8 285 aaKnown RBP17.55■□□□□ 0.4
Ddx42-201ENSMUST00000021046 Baz1aO88379 1555 aa17.55■□□□□ 0.4
Ddx42-201ENSMUST00000021046 Ush1cQ9ES64 910 aa17.55■□□□□ 0.4
Ddx42-201ENSMUST00000021046 Fhad1A6PWD2 1420 aa17.54■□□□□ 0.4
Ddx42-201ENSMUST00000021046 Neurod2Q62414 383 aa17.53■□□□□ 0.4
Ddx42-201ENSMUST00000021046 Nlrp6Q91WS2 869 aa17.53■□□□□ 0.4
Ddx42-201ENSMUST00000021046 Becn1O88597 448 aa17.51■□□□□ 0.39
Ddx42-201ENSMUST00000021046 Eea1Q8BL66 1411 aa17.51■□□□□ 0.39
Ddx42-201ENSMUST00000021046 Rgl3Q3UYI5 709 aa17.5■□□□□ 0.39
Ddx42-201ENSMUST00000021046 PogkQ80TC5 607 aa17.5■□□□□ 0.39
Ddx42-201ENSMUST00000021046 Fam13bQ8K2H3 851 aa17.5■□□□□ 0.39
Ddx42-201ENSMUST00000021046 Mak16Q8BGS0 296 aaKnown RBP17.48■□□□□ 0.39
Ddx42-201ENSMUST00000021046 Ncapd3Q6ZQK0 1506 aa17.48■□□□□ 0.39
Ddx42-201ENSMUST00000021046 Zscan21Q07231 555 aa17.45■□□□□ 0.38
Ddx42-201ENSMUST00000021046 Podxl2Q8CAE9 603 aa17.45■□□□□ 0.38
Ddx42-201ENSMUST00000021046 Mapk8ip3Q9ESN9 1337 aa17.44■□□□□ 0.38
Ddx42-201ENSMUST00000021046 PnisrA2AJT4 805 aaKnown RBP17.43■□□□□ 0.38
Ddx42-201ENSMUST00000021046 Mfap1aC0HKD8 439 aaKnown RBP17.43■□□□□ 0.38
Ddx42-201ENSMUST00000021046 Mfap1bC0HKD9 439 aaKnown RBP17.43■□□□□ 0.38
Ddx42-201ENSMUST00000021046 Nkx1-2P42580 305 aa17.42■□□□□ 0.38
Ddx42-201ENSMUST00000021046 AcrbpQ3V140 540 aa17.42■□□□□ 0.38
Ddx42-201ENSMUST00000021046 Tex2Q6ZPJ0 1128 aaKnown RBP17.42■□□□□ 0.38
Ddx42-201ENSMUST00000021046 Cwc22Q8C5N3 908 aaKnown RBP17.41■□□□□ 0.38
Ddx42-201ENSMUST00000021046 Grwd1Q810D6 446 aaKnown RBP17.4■□□□□ 0.38
Ddx42-201ENSMUST00000021046 Os9Q8K2C7 672 aa17.4■□□□□ 0.38
Ddx42-201ENSMUST00000021046 Gpatch11Q3UFS4 262 aa17.4■□□□□ 0.38
Ddx42-201ENSMUST00000021046 Zhx1P70121 873 aa17.4■□□□□ 0.38
Ddx42-201ENSMUST00000021046 Cers3Q1A3B0 383 aa17.39■□□□□ 0.37
Ddx42-201ENSMUST00000021046 Card11Q8CIS0 1159 aa17.39■□□□□ 0.37
Ddx42-201ENSMUST00000021046 Scaf1Q5U4C3 1256 aaKnown RBP17.37■□□□□ 0.37
Ddx42-201ENSMUST00000021046 Ccdc183A2AJB1 534 aa17.37■□□□□ 0.37
Ddx42-201ENSMUST00000021046 Kiaa0754Q69ZZ9 979 aa17.37■□□□□ 0.37
Ddx42-201ENSMUST00000021046 Tnpo1Q8BFY9 898 aaKnown RBP17.36■□□□□ 0.37
Ddx42-201ENSMUST00000021046 Ssh1Q76I79 1042 aa17.36■□□□□ 0.37
Ddx42-201ENSMUST00000021046 CrbnQ8C7D2 445 aa17.35■□□□□ 0.37
Ddx42-201ENSMUST00000021046 Rfx1P48377 963 aa17.35■□□□□ 0.37
Ddx42-201ENSMUST00000021046 Tmem132aQ922P8 1018 aa17.34■□□□□ 0.37
Ddx42-201ENSMUST00000021046 Mcm4P49717 862 aa17.33■□□□□ 0.37
Ddx42-201ENSMUST00000021046 Rapgef2Q8CHG7 1496 aa17.33■□□□□ 0.37
Ddx42-201ENSMUST00000021046 NacadQ5SWP3 1504 aa17.32■□□□□ 0.36
Ddx42-201ENSMUST00000021046 Cluap1Q8R3P7 413 aa17.31■□□□□ 0.36
Ddx42-201ENSMUST00000021046 Cbx1P83917 185 aaKnown RBP17.31■□□□□ 0.36
Ddx42-201ENSMUST00000021046 KarsQ99MN1 595 aaKnown RBP17.31■□□□□ 0.36
Ddx42-201ENSMUST00000021046 Zfp444Q3TDV8 331 aaKnown RBP17.3■□□□□ 0.36
Ddx42-201ENSMUST00000021046 Chmp4bQ9D8B3 224 aaKnown RBP17.29■□□□□ 0.36
Ddx42-201ENSMUST00000021046 Rundc1Q0VDN7 615 aa17.29■□□□□ 0.36
Ddx42-201ENSMUST00000021046 Samd1D3YXK1 519 aa17.29■□□□□ 0.36
Ddx42-201ENSMUST00000021046 Dhx30Q99PU8 1217 aaKnown RBP17.28■□□□□ 0.36
Ddx42-201ENSMUST00000021046 Speer4f1Q9D5Q6 258 aa17.28■□□□□ 0.36
Ddx42-201ENSMUST00000021046 Aebp1Q640N1 1128 aa17.28■□□□□ 0.36
Ddx42-201ENSMUST00000021046 Il4rP16382 810 aa17.26■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Map7d2A2AG50 781 aa17.26■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Rabep1O35551 862 aa17.25■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Trim30aP15533 496 aa17.25■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Rsph3aQ3UFY4 516 aa17.24■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Dcaf11Q91VU6 549 aa17.24■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Pkd2O35245 966 aa17.24■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Irf5P56477 497 aa17.24■□□□□ 0.35
Ddx42-201ENSMUST00000021046 UacaQ8CGB3 1411 aa17.24■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Gse1Q3U3C9 1213 aa17.24■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Ppp1r9bQ6R891 817 aaKnown RBP17.24■□□□□ 0.35
Ddx42-201ENSMUST00000021046 GorabQ8BRM2 368 aa17.23■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Rpgrip1lQ8CG73 1264 aa17.23■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Map7O88735 730 aa17.22■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Ccdc18Q640L5 1455 aa17.22■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Clcn1Q64347 994 aa17.21■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Adam1bQ8R534 806 aa17.21■□□□□ 0.35
Ddx42-201ENSMUST00000021046 Sptbn5F6UCX4 1208 aa17.2■□□□□ 0.34
Ddx42-201ENSMUST00000021046 Mphosph9A6H5Y1 991 aa17.2■□□□□ 0.34
Ddx42-201ENSMUST00000021046 Casc1Q6TDU8 730 aa17.2■□□□□ 0.34
Ddx42-201ENSMUST00000021046 Nom1Q3UFM5 854 aaKnown RBP17.19■□□□□ 0.34
Ddx42-201ENSMUST00000021046 Tshz2Q68FE9 1030 aa17.19■□□□□ 0.34
Ddx42-201ENSMUST00000021046 Esx1O88933 382 aa17.19■□□□□ 0.34
Ddx42-201ENSMUST00000021046 Rnf214Q8BFU3 668 aaKnown RBP17.18■□□□□ 0.34
Ddx42-201ENSMUST00000021046 Mrvi1Q9WUX5 899 aaKnown RBP17.18■□□□□ 0.34
Ddx42-201ENSMUST00000021046 Fez1Q8K0X8 392 aa17.17■□□□□ 0.34
Ddx42-201ENSMUST00000021046 Fyco1Q8VDC1 1437 aa17.17■□□□□ 0.34
Ddx42-201ENSMUST00000021046 Nectin2P32507 530 aa17.15■□□□□ 0.34
Ddx42-201ENSMUST00000021046 Isy1Q69ZQ2 285 aaKnown RBP17.15■□□□□ 0.34
Ddx42-201ENSMUST00000021046 Gys2Q8VCB3 704 aa17.15■□□□□ 0.34
Ddx42-201ENSMUST00000021046 Lekr1B2RVN1 116 aa17.15■□□□□ 0.34
Ddx42-201ENSMUST00000021046 Ubap1lG3UW59 384 aa17.13■□□□□ 0.33
Ddx42-201ENSMUST00000021046 Q7TT23 1179 aa17.13■□□□□ 0.33
Ddx42-201ENSMUST00000021046 MpndQ3TV65 487 aa17.13■□□□□ 0.33
Ddx42-201ENSMUST00000021046 Pcmtd1P59913 357 aa17.12■□□□□ 0.33
Ddx42-201ENSMUST00000021046 Znf771Q8BJ90 317 aa17.11■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms