RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Abcc5Q9R1X5 1436 aa22.92■■□□□ 1.26
Shh-201ENSMUST00000002708 Nolc1E9Q5C9 702 aaKnown RBP22.92■■□□□ 1.26
Shh-201ENSMUST00000002708 Calr4Q3TQS0 420 aa22.92■■□□□ 1.26
Shh-201ENSMUST00000002708 Arhgef40Q3UPH7 1517 aa22.92■■□□□ 1.26
Shh-201ENSMUST00000002708 Zfp644E9QA22 1323 aa22.91■■□□□ 1.26
Shh-201ENSMUST00000002708 Nup160Q9Z0W3 1402 aaKnown RBP22.91■■□□□ 1.26
Shh-201ENSMUST00000002708 Rfx7F8VPJ6 1459 aa22.9■■□□□ 1.26
Shh-201ENSMUST00000002708 Kdm6bQ5NCY0 1641 aa22.9■■□□□ 1.26
Shh-201ENSMUST00000002708 Pbrm1Q8BSQ9 1634 aaKnown RBP22.9■■□□□ 1.26
Shh-201ENSMUST00000002708 Anp32aO35381 247 aa22.89■■□□□ 1.26
Shh-201ENSMUST00000002708 Plekhh2Q8C115 1491 aa22.88■■□□□ 1.25
Shh-201ENSMUST00000002708 Cdc42bpaQ3UU96 1719 aa22.86■■□□□ 1.25
Shh-201ENSMUST00000002708 Setbp1Q9Z180 1582 aa22.85■■□□□ 1.25
Shh-201ENSMUST00000002708 Smg6P61406 1418 aaKnown RBP22.85■■□□□ 1.25
Shh-201ENSMUST00000002708 Arhgef11Q68FM7 1552 aa22.84■■□□□ 1.25
Shh-201ENSMUST00000002708 Abcc2Q8VI47 1543 aa22.84■■□□□ 1.25
Shh-201ENSMUST00000002708 Adcy10Q8C0T9 1614 aa22.83■■□□□ 1.24
Shh-201ENSMUST00000002708 SphkapQ6NSW3 1687 aa22.83■■□□□ 1.24
Shh-201ENSMUST00000002708 Pkd2O35245 966 aa22.81■■□□□ 1.24
Shh-201ENSMUST00000002708 Shroom2A2ALU4 1481 aa22.81■■□□□ 1.24
Shh-201ENSMUST00000002708 Mtus2Q3UHD3 1353 aa22.8■■□□□ 1.24
Shh-201ENSMUST00000002708 Usp47Q8BY87 1376 aa22.8■■□□□ 1.24
Shh-201ENSMUST00000002708 Eif5bQ05D44 1216 aaKnown RBP22.79■■□□□ 1.24
Shh-201ENSMUST00000002708 Lrriq1Q0P5X1 1673 aa22.79■■□□□ 1.24
Shh-201ENSMUST00000002708 Pprc1Q6NZN1 1644 aa22.78■■□□□ 1.24
Shh-201ENSMUST00000002708 Arhgap31A6X8Z5 1425 aa22.76■■□□□ 1.23
Shh-201ENSMUST00000002708 Adgrb2Q8CGM1 1561 aa22.74■■□□□ 1.23
Shh-201ENSMUST00000002708 Rprd2Q6NXI6 1469 aaKnown RBP22.74■■□□□ 1.23
Shh-201ENSMUST00000002708 Cc2d2bA0A286YDU8 1405 aa22.73■■□□□ 1.23
Shh-201ENSMUST00000002708 Kiaa1551Q5DTW7 1521 aa22.73■■□□□ 1.23
Shh-201ENSMUST00000002708 Kdm3bQ6ZPY7 1562 aa22.73■■□□□ 1.23
Shh-201ENSMUST00000002708 P3h3Q8CG70 732 aa22.68■■□□□ 1.22
Shh-201ENSMUST00000002708 Il16O54824 1322 aa22.68■■□□□ 1.22
Shh-201ENSMUST00000002708 AlkP97793 1621 aa22.68■■□□□ 1.22
Shh-201ENSMUST00000002708 Mroh2aD3Z750 1679 aa22.67■■□□□ 1.22
Shh-201ENSMUST00000002708 Mrs2Q5NCE8 434 aa22.67■■□□□ 1.22
Shh-201ENSMUST00000002708 Prex2Q3LAC4 1598 aa22.66■■□□□ 1.22
Shh-201ENSMUST00000002708 Magi1Q6RHR9 1471 aa22.66■■□□□ 1.22
Shh-201ENSMUST00000002708 Lamc1P02468 1607 aaKnown RBP22.66■■□□□ 1.22
Shh-201ENSMUST00000002708 Wwc2Q6NXJ0 1187 aa22.65■■□□□ 1.22
Shh-201ENSMUST00000002708 Kif21bQ9QXL1 1668 aa22.65■■□□□ 1.22
Shh-201ENSMUST00000002708 Ccdc141E9Q8Q6 1531 aa22.64■■□□□ 1.21
Shh-201ENSMUST00000002708 Ppp4r2Q0VGB7 417 aa22.64■■□□□ 1.21
Shh-201ENSMUST00000002708 Supt16hQ920B9 1047 aa22.63■■□□□ 1.21
Shh-201ENSMUST00000002708 Zcchc11B2RX14 1644 aaKnown RBP22.62■■□□□ 1.21
Shh-201ENSMUST00000002708 Pik3c2gO70167 1506 aa22.62■■□□□ 1.21
Shh-201ENSMUST00000002708 Supt6hQ62383 1726 aaKnown RBP22.62■■□□□ 1.21
Shh-201ENSMUST00000002708 Dhx57Q6P5D3 1388 aaKnown RBP22.62■■□□□ 1.21
Shh-201ENSMUST00000002708 Fkbp15Q6P9Q6 1216 aaKnown RBP22.61■■□□□ 1.21
Shh-201ENSMUST00000002708 Ncoa1P70365 1447 aa22.61■■□□□ 1.21
Shh-201ENSMUST00000002708 Slc4a2P13808 1237 aaKnown RBP22.6■■□□□ 1.21
Shh-201ENSMUST00000002708 Dhx9O70133 1380 aaKnown RBP22.6■■□□□ 1.21
Shh-201ENSMUST00000002708 Tdrd9Q14BI7 1383 aa22.6■■□□□ 1.21
Shh-201ENSMUST00000002708 Mapkbp1Q6NS57 1503 aa22.59■■□□□ 1.21
Shh-201ENSMUST00000002708 Bcl11aQ9QYE3 773 aa22.58■■□□□ 1.2
Shh-201ENSMUST00000002708 Fam163aQ8CAA5 168 aa22.57■■□□□ 1.2
Shh-201ENSMUST00000002708 Kif14L0N7N1 1674 aaKnown RBP22.57■■□□□ 1.2
Shh-201ENSMUST00000002708 Ttll5Q8CHB8 1328 aa22.57■■□□□ 1.2
Shh-201ENSMUST00000002708 Rgl3Q3UYI5 709 aa22.56■■□□□ 1.2
Shh-201ENSMUST00000002708 Ifnlr1Q8CGK5 535 aa22.55■■□□□ 1.2
Shh-201ENSMUST00000002708 Exoc6Q8R313 802 aa22.55■■□□□ 1.2
Shh-201ENSMUST00000002708 Map3k4O08648 1597 aa22.55■■□□□ 1.2
Shh-201ENSMUST00000002708 Washc2Q6PGL7 1334 aa22.54■■□□□ 1.2
Shh-201ENSMUST00000002708 Trak1Q6PD31 939 aa22.54■■□□□ 1.2
Shh-201ENSMUST00000002708 Dnmt1P13864 1620 aaKnown RBP22.53■■□□□ 1.2
Shh-201ENSMUST00000002708 Wdr43Q6ZQL4 677 aaKnown RBP22.53■■□□□ 1.2
Shh-201ENSMUST00000002708 Rusc2Q80U22 1514 aa22.52■■□□□ 1.2
Shh-201ENSMUST00000002708 Neo1P97798 1493 aa22.52■■□□□ 1.2
Shh-201ENSMUST00000002708 DiexfQ8BTT6 772 aaKnown RBP22.5■■□□□ 1.19
Shh-201ENSMUST00000002708 Arhgef12Q8R4H2 1543 aaKnown RBP22.5■■□□□ 1.19
Shh-201ENSMUST00000002708 Mlh3A0A1Y7VMP7 1443 aa22.48■■□□□ 1.19
Shh-201ENSMUST00000002708 Jph4Q80WT0 628 aa22.48■■□□□ 1.19
Shh-201ENSMUST00000002708 Nup155Q99P88 1391 aaKnown RBP22.47■■□□□ 1.19
Shh-201ENSMUST00000002708 Dapk1Q80YE7 1442 aa22.44■■□□□ 1.18
Shh-201ENSMUST00000002708 AknaQ80VW7 1404 aa22.44■■□□□ 1.18
Shh-201ENSMUST00000002708 Pak3Q61036 559 aa22.44■■□□□ 1.18
Shh-201ENSMUST00000002708 NrdcQ8BHG1 1161 aa22.44■■□□□ 1.18
Shh-201ENSMUST00000002708 Caskin1Q6P9K8 1431 aa22.44■■□□□ 1.18
Shh-201ENSMUST00000002708 Gm13695A2AK44 830 aa22.43■■□□□ 1.18
Shh-201ENSMUST00000002708 Trpm2Q91YD4 1506 aa22.43■■□□□ 1.18
Shh-201ENSMUST00000002708 Rundc1Q0VDN7 615 aa22.42■■□□□ 1.18
Shh-201ENSMUST00000002708 Zbtb7cQ8VCZ7 619 aa22.42■■□□□ 1.18
Shh-201ENSMUST00000002708 Mbd5B1AYB6 1498 aa22.42■■□□□ 1.18
Shh-201ENSMUST00000002708 Wdr7Q920I9 1489 aa22.42■■□□□ 1.18
Shh-201ENSMUST00000002708 Slc4a3P16283 1227 aa22.4■■□□□ 1.18
Shh-201ENSMUST00000002708 Mug2P28666 1451 aa22.4■■□□□ 1.18
Shh-201ENSMUST00000002708 Map4P27546 1125 aaKnown RBP22.4■■□□□ 1.18
Shh-201ENSMUST00000002708 Rrbp1Q99PL5 1605 aaKnown RBP22.39■■□□□ 1.17
Shh-201ENSMUST00000002708 Grwd1Q810D6 446 aaKnown RBP22.39■■□□□ 1.17
Shh-201ENSMUST00000002708 Fmn2Q9JL04 1578 aa22.37■■□□□ 1.17
Shh-201ENSMUST00000002708 Fancd2Q80V62 1450 aa22.37■■□□□ 1.17
Shh-201ENSMUST00000002708 Cwc22Q8C5N3 908 aaKnown RBP22.36■■□□□ 1.17
Shh-201ENSMUST00000002708 Card11Q8CIS0 1159 aa22.36■■□□□ 1.17
Shh-201ENSMUST00000002708 Fam208aQ69ZR9 1610 aaKnown RBP22.36■■□□□ 1.17
Shh-201ENSMUST00000002708 Liat1Q810M6 228 aa22.35■■□□□ 1.17
Shh-201ENSMUST00000002708 Cdk13Q69ZA1 1511 aaKnown RBP22.34■■□□□ 1.17
Shh-201ENSMUST00000002708 Eif4g3Q80XI3 1579 aaKnown RBP22.33■■□□□ 1.17
Shh-201ENSMUST00000002708 PnisrA2AJT4 805 aaKnown RBP22.32■■□□□ 1.16
Shh-201ENSMUST00000002708 Kcnh8P59111 1102 aa22.31■■□□□ 1.16
Shh-201ENSMUST00000002708 Rrp7aQ9D1C9 280 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms