RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A PET309P32522 965 aaPredicted RBP15.21■□□□□ 0.03
TRN1tP(UGG)A YBL029WP38201 376 aa15.21■□□□□ 0.03
TRN1tP(UGG)A HXT6P39003 570 aaKnown RBP15.21■□□□□ 0.03
TRN1tP(UGG)A HXT7P39004 570 aa15.21■□□□□ 0.03
TRN1tP(UGG)A FRT2P39734 528 aa15.21■□□□□ 0.03
TRN1tP(UGG)A YEN1P40028 759 aa15.21■□□□□ 0.03
TRN1tP(UGG)A YGR053CP53234 283 aa15.21■□□□□ 0.03
TRN1tP(UGG)A VHS1Q03785 461 aa15.21■□□□□ 0.03
TRN1tP(UGG)A SLF1Q12034 447 aaKnown RBP15.21■□□□□ 0.03
TRN1tP(UGG)A BRR1Q99177 341 aaPredicted RBP15.21■□□□□ 0.03
TRN1tP(UGG)A AI3P03877 415 aa15.2■□□□□ 0.02
TRN1tP(UGG)A GFD2P25370 566 aaKnown RBP15.2■□□□□ 0.02
TRN1tP(UGG)A GBP2P25555 427 aaKnown RBP RIP-Chip data15.2■□□□□ 0.02not detected
TRN1tP(UGG)A MLS1P30952 554 aa15.2■□□□□ 0.02
TRN1tP(UGG)A DEP1P31385 405 aa15.2■□□□□ 0.02
TRN1tP(UGG)A BMT2P38278 337 aa15.2■□□□□ 0.02
TRN1tP(UGG)A ARN1P38731 627 aa15.2■□□□□ 0.02
TRN1tP(UGG)A CEM1P39525 442 aa15.2■□□□□ 0.02
TRN1tP(UGG)A TMA22P47089 198 aaPredicted RBP15.2■□□□□ 0.02
TRN1tP(UGG)A YET2Q04210 160 aa15.2■□□□□ 0.02
TRN1tP(UGG)A YMR111CQ04461 462 aaPredicted RBP15.2■□□□□ 0.02
TRN1tP(UGG)A DIA2Q08496 732 aaPredicted RBP15.2■□□□□ 0.02
TRN1tP(UGG)A RRP36Q12481 300 aaPredicted RBP15.2■□□□□ 0.02
TRN1tP(UGG)A YCL012CQ8J0M4 134 aa15.2■□□□□ 0.02
TRN1tP(UGG)A SNF5P18480 905 aa15.19■□□□□ 0.02
TRN1tP(UGG)A MEI5P32489 222 aa15.19■□□□□ 0.02
TRN1tP(UGG)A UTH1P36135 365 aa15.19■□□□□ 0.02
TRN1tP(UGG)A KXD1P53158 218 aa15.19■□□□□ 0.02
TRN1tP(UGG)A EGD1Q02642 157 aaKnown RBP15.19■□□□□ 0.02
TRN1tP(UGG)A CMR1Q12510 522 aaKnown RBP15.19■□□□□ 0.02
TRN1tP(UGG)A HXK2P04807 486 aaKnown RBP15.18■□□□□ 0.02
TRN1tP(UGG)A DST1P07273 309 aa15.18■□□□□ 0.02
TRN1tP(UGG)A KIN2P13186 1147 aaKnown RBP15.18■□□□□ 0.02
TRN1tP(UGG)A ARA1P38115 344 aa15.18■□□□□ 0.02
TRN1tP(UGG)A CAB2P40506 365 aa15.18■□□□□ 0.02
TRN1tP(UGG)A SUM1P46676 1062 aa15.18■□□□□ 0.02
TRN1tP(UGG)A USE1P53146 245 aa15.18■□□□□ 0.02
TRN1tP(UGG)A ERG26P53199 349 aaKnown RBP15.18■□□□□ 0.02
TRN1tP(UGG)A RPS4AP0CX35 261 aaKnown RBP15.17■□□□□ 0.02
TRN1tP(UGG)A RPS4BP0CX36 261 aaKnown RBP15.17■□□□□ 0.02
TRN1tP(UGG)A SGV1P23293 657 aaKnown RBP15.17■□□□□ 0.02
TRN1tP(UGG)A OCA4P25366 362 aa15.17■□□□□ 0.02
TRN1tP(UGG)A SPT16P32558 1035 aaKnown RBP15.17■□□□□ 0.02
TRN1tP(UGG)A MEP2P41948 499 aa15.17■□□□□ 0.02
TRN1tP(UGG)A YMR102CQ03177 834 aa15.17■□□□□ 0.02
TRN1tP(UGG)A RKM5Q12367 367 aa15.17■□□□□ 0.02
TRN1tP(UGG)A MHT1Q12525 324 aa15.17■□□□□ 0.02
TRN1tP(UGG)A SAS5Q99314 248 aa15.17■□□□□ 0.02
TRN1tP(UGG)A SEN1Q00416 2231 aaKnown RBP15.17■□□□□ 0.02
TRN1tP(UGG)A DOM34P33309 386 aa15.16■□□□□ 0.02
TRN1tP(UGG)A EMC3P36039 253 aa15.16■□□□□ 0.02
TRN1tP(UGG)A CAF4P36130 643 aa15.16■□□□□ 0.02
TRN1tP(UGG)A YHL008CP38750 627 aa15.16■□□□□ 0.02
TRN1tP(UGG)A PLB1P39105 664 aa15.16■□□□□ 0.02
TRN1tP(UGG)A AZF1P41696 914 aa15.16■□□□□ 0.02
TRN1tP(UGG)A CCT7P42943 550 aaKnown RBP15.16■□□□□ 0.02
TRN1tP(UGG)A ARE2P53629 642 aaKnown RBP15.16■□□□□ 0.02
TRN1tP(UGG)A SDH1Q00711 640 aa15.16■□□□□ 0.02
TRN1tP(UGG)A GIP3Q03016 1276 aa15.16■□□□□ 0.02
TRN1tP(UGG)A SGT1Q08446 395 aa15.16■□□□□ 0.02
TRN1tP(UGG)A HAL9Q12180 1030 aa15.16■□□□□ 0.02
TRN1tP(UGG)A YOR114WQ12219 294 aa15.16■□□□□ 0.02
TRN1tP(UGG)A CMP2P14747 604 aa15.15■□□□□ 0.02
TRN1tP(UGG)A RDS2P19541 446 aaKnown RBP15.15■□□□□ 0.02
TRN1tP(UGG)A FUN30P31380 1131 aa15.15■□□□□ 0.02
TRN1tP(UGG)A CUE2P36075 443 aaKnown RBP15.15■□□□□ 0.02
TRN1tP(UGG)A YHR033WP38690 423 aa15.15■□□□□ 0.02
TRN1tP(UGG)A GGC1P38988 300 aa15.15■□□□□ 0.02
TRN1tP(UGG)A ERV46P39727 415 aa15.15■□□□□ 0.02
TRN1tP(UGG)A NAS6P50086 228 aa15.15■□□□□ 0.02
TRN1tP(UGG)A RHO3Q00245 231 aaKnown RBP15.15■□□□□ 0.02
TRN1tP(UGG)A MET31Q03081 177 aa15.15■□□□□ 0.02
TRN1tP(UGG)A SPC24Q04477 213 aa15.15■□□□□ 0.02
TRN1tP(UGG)A EAF1Q06337 982 aa15.15■□□□□ 0.02
TRN1tP(UGG)A OPT2Q06593 877 aa15.15■□□□□ 0.02
TRN1tP(UGG)A UAF30Q08747 228 aa15.15■□□□□ 0.02
TRN1tP(UGG)A RPS21AP0C0V8 87 aaKnown RBP15.14■□□□□ 0.01
TRN1tP(UGG)A DMA1P38823 416 aa15.14■□□□□ 0.01
TRN1tP(UGG)A LYS1P38998 373 aaRIP-Chip data15.14■□□□□ 0.01not detected
TRN1tP(UGG)A MET12P46151 657 aa15.14■□□□□ 0.01
TRN1tP(UGG)A GTO1P48239 356 aa15.14■□□□□ 0.01
TRN1tP(UGG)A YNR021WP53723 404 aaKnown RBP15.14■□□□□ 0.01
TRN1tP(UGG)A MPS1P54199 764 aa15.14■□□□□ 0.01
TRN1tP(UGG)A GTR1Q00582 310 aa15.14■□□□□ 0.01
TRN1tP(UGG)A PRP38Q00723 242 aaPredicted RBP15.14■□□□□ 0.01
TRN1tP(UGG)A YLR111WQ12528 110 aa15.14■□□□□ 0.01
TRN1tP(UGG)A RPL1AP0CX43 217 aaKnown RBP15.13■□□□□ 0.01
TRN1tP(UGG)A RPL1BP0CX44 217 aaKnown RBP15.13■□□□□ 0.01
TRN1tP(UGG)A RNA1P11745 407 aaKnown RBP15.13■□□□□ 0.01
TRN1tP(UGG)A TYR1P20049 452 aa15.13■□□□□ 0.01
TRN1tP(UGG)A YCR087C-AP37263 153 aa15.13■□□□□ 0.01
TRN1tP(UGG)A RGA1P39083 1007 aa15.13■□□□□ 0.01
TRN1tP(UGG)A LRO1P40345 661 aa15.13■□□□□ 0.01
TRN1tP(UGG)A PTR3P43606 678 aa15.13■□□□□ 0.01
TRN1tP(UGG)A NNF2P53253 936 aa15.13■□□□□ 0.01
TRN1tP(UGG)A GTB1Q04924 702 aa15.13■□□□□ 0.01
TRN1tP(UGG)A BSC2Q05611 235 aa15.13■□□□□ 0.01
TRN1tP(UGG)A BNA5Q05979 453 aa15.13■□□□□ 0.01
TRN1tP(UGG)A CDA1Q06702 301 aa15.13■□□□□ 0.01
TRN1tP(UGG)A LAT1P12695 482 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 5,963 RNA–protein pairs in 162.9 ms